Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 AC092324.1-201ENST00000468671 324 ntBASIC4.84□□□□□ -1.63
CDH6P55285 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC4.84□□□□□ -1.63
CDH6P55285 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.84□□□□□ -1.63
CDH6P55285 SOX5P1-201ENST00000524155 1127 ntBASIC4.84□□□□□ -1.63
CDH6P55285 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.84□□□□□ -1.63
CDH6P55285 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.84□□□□□ -1.63
CDH6P55285 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.84□□□□□ -1.63
CDH6P55285 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.84□□□□□ -1.63
CDH6P55285 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.84□□□□□ -1.63
CDH6P55285 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.84□□□□□ -1.63
CDH6P55285 UBE2FP2-201ENST00000566646 462 ntBASIC4.84□□□□□ -1.63
CDH6P55285 MIR4436B2-201ENST00000581415 91 ntBASIC4.84□□□□□ -1.63
CDH6P55285 MIR4436B1-201ENST00000583272 91 ntBASIC4.84□□□□□ -1.63
CDH6P55285 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.84□□□□□ -1.63
CDH6P55285 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.84□□□□□ -1.63
CDH6P55285 AC000123.3-201ENST00000624029 4975 ntBASIC4.84□□□□□ -1.63
CDH6P55285 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
CDH6P55285 AC083843.3-201ENST00000623679 2186 ntBASIC4.84□□□□□ -1.64
CDH6P55285 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
CDH6P55285 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CDH6P55285 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CDH6P55285 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CDH6P55285 MTCO1P22-201ENST00000604619 1360 ntBASIC4.83□□□□□ -1.64
CDH6P55285 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CDH6P55285 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CDH6P55285 Y_RNA.62-201ENST00000362840 99 ntBASIC4.83□□□□□ -1.64
CDH6P55285 RN7SKP115-201ENST00000363177 317 ntBASIC4.83□□□□□ -1.64
CDH6P55285 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CDH6P55285 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CDH6P55285 RNA5SP87-201ENST00000384155 118 ntBASIC4.83□□□□□ -1.64
CDH6P55285 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.83□□□□□ -1.64
CDH6P55285 RN7SKP267-201ENST00000410381 285 ntBASIC4.83□□□□□ -1.64
CDH6P55285 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC4.83□□□□□ -1.64
CDH6P55285 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.83□□□□□ -1.64
CDH6P55285 Z74021.1-201ENST00000423610 407 ntBASIC4.83□□□□□ -1.64
CDH6P55285 AL590762.4-201ENST00000425885 253 ntBASIC4.83□□□□□ -1.64
CDH6P55285 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.83□□□□□ -1.64
CDH6P55285 AC005154.2-201ENST00000438110 379 ntBASIC4.83□□□□□ -1.64
CDH6P55285 HSPE1P22-201ENST00000456856 327 ntBASIC4.83□□□□□ -1.64
CDH6P55285 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.83□□□□□ -1.64
CDH6P55285 TRIM36-IT1-201ENST00000503723 881 ntBASIC4.83□□□□□ -1.64
CDH6P55285 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.83□□□□□ -1.64
CDH6P55285 AC098799.3-201ENST00000506095 438 ntBASIC4.83□□□□□ -1.64
CDH6P55285 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.83□□□□□ -1.64
CDH6P55285 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC4.83□□□□□ -1.64
CDH6P55285 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.83□□□□□ -1.64
CDH6P55285 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.83□□□□□ -1.64
CDH6P55285 AC107918.3-201ENST00000533272 382 ntBASIC4.83□□□□□ -1.64
CDH6P55285 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.83□□□□□ -1.64
CDH6P55285 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.83□□□□□ -1.64
CDH6P55285 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.83□□□□□ -1.64
CDH6P55285 AC091042.1-201ENST00000579213 173 ntBASIC4.83□□□□□ -1.64
CDH6P55285 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.83□□□□□ -1.64
CDH6P55285 MIR6853-201ENST00000619642 74 ntBASIC4.83□□□□□ -1.64
CDH6P55285 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.83□□□□□ -1.64
CDH6P55285 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CDH6P55285 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
CDH6P55285 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CDH6P55285 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CDH6P55285 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CDH6P55285 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CDH6P55285 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.82□□□□□ -1.64
CDH6P55285 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CDH6P55285 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CDH6P55285 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CDH6P55285 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.82□□□□□ -1.64
CDH6P55285 SNORD96B-201ENST00000386148 79 ntBASIC4.82□□□□□ -1.64
CDH6P55285 AL133270.1-201ENST00000402635 279 ntBASIC4.82□□□□□ -1.64
CDH6P55285 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC4.82□□□□□ -1.64
CDH6P55285 AC140479.3-201ENST00000418944 1126 ntBASIC4.82□□□□□ -1.64
CDH6P55285 RPL21P43-201ENST00000425440 472 ntBASIC4.82□□□□□ -1.64
CDH6P55285 AC008072.1-201ENST00000434254 824 ntBASIC4.82□□□□□ -1.64
CDH6P55285 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CDH6P55285 AC016831.4-201ENST00000438302 307 ntBASIC4.82□□□□□ -1.64
CDH6P55285 AC108463.1-201ENST00000450258 347 ntBASIC4.82□□□□□ -1.64
CDH6P55285 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CDH6P55285 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.82□□□□□ -1.64
CDH6P55285 RN7SL346P-201ENST00000491561 294 ntBASIC4.82□□□□□ -1.64
CDH6P55285 RPL36AP41-201ENST00000493820 306 ntBASIC4.82□□□□□ -1.64
CDH6P55285 AC113398.2-201ENST00000507630 558 ntBASIC4.82□□□□□ -1.64
CDH6P55285 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.82□□□□□ -1.64
CDH6P55285 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.82□□□□□ -1.64
CDH6P55285 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.82□□□□□ -1.64
CDH6P55285 IGKV1-32-201ENST00000519290 311 ntBASIC4.82□□□□□ -1.64
CDH6P55285 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CDH6P55285 AL110118.1-201ENST00000553543 400 ntBASIC4.82□□□□□ -1.64
CDH6P55285 AC105129.1-201ENST00000560250 297 ntBASIC4.82□□□□□ -1.64
CDH6P55285 AC209154.1-201ENST00000582156 337 ntBASIC4.82□□□□□ -1.64
CDH6P55285 AL049539.1-201ENST00000611964 459 ntBASIC4.82□□□□□ -1.64
CDH6P55285 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.82□□□□□ -1.64
CDH6P55285 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.82□□□□□ -1.64
CDH6P55285 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CDH6P55285 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CDH6P55285 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CDH6P55285 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
CDH6P55285 AC104118.1-201ENST00000607625 1589 ntBASIC4.82□□□□□ -1.64
CDH6P55285 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CDH6P55285 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.82□□□□□ -1.64
CDH6P55285 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.82□□□□□ -1.64
CDH6P55285 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 127.7 ms