Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.03□□□□□ -1.6
CLCNKAP51800 AL109941.1-201ENST00000401925 229 ntBASIC5.03□□□□□ -1.6
CLCNKAP51800 AL589647.1-201ENST00000402485 466 ntBASIC5.03□□□□□ -1.6
CLCNKAP51800 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.03□□□□□ -1.6
CLCNKAP51800 RN7SKP125-201ENST00000410481 302 ntBASIC5.03□□□□□ -1.6
CLCNKAP51800 AL158050.1-201ENST00000416077 457 ntBASIC5.03□□□□□ -1.6
CLCNKAP51800 AL606495.1-201ENST00000422100 813 ntBASIC5.03□□□□□ -1.6
CLCNKAP51800 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.03□□□□□ -1.6
CLCNKAP51800 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.03□□□□□ -1.6
CLCNKAP51800 AC092647.3-201ENST00000443044 633 ntBASIC5.03□□□□□ -1.6
CLCNKAP51800 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.03□□□□□ -1.6
CLCNKAP51800 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.03□□□□□ -1.6
CLCNKAP51800 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.03□□□□□ -1.6
CLCNKAP51800 COX6B1P2-201ENST00000489624 230 ntBASIC5.03□□□□□ -1.6
CLCNKAP51800 SUMO1P1-201ENST00000497904 306 ntBASIC5.03□□□□□ -1.6
CLCNKAP51800 snoU109.6-201ENST00000516831 118 ntBASIC5.03□□□□□ -1.6
CLCNKAP51800 RN7SKP147-201ENST00000517154 244 ntBASIC5.03□□□□□ -1.6
CLCNKAP51800 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC5.03□□□□□ -1.6
CLCNKAP51800 OR8X1P-201ENST00000534542 869 ntBASIC5.03□□□□□ -1.6
CLCNKAP51800 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC5.03□□□□□ -1.6
CLCNKAP51800 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC5.03□□□□□ -1.6
CLCNKAP51800 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC5.03□□□□□ -1.6
CLCNKAP51800 C1GALT1P1-201ENST00000548895 1089 ntBASIC5.03□□□□□ -1.6
CLCNKAP51800 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.03□□□□□ -1.6
CLCNKAP51800 AL512310.9-201ENST00000553311 948 ntBASIC5.03□□□□□ -1.6
CLCNKAP51800 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC5.03□□□□□ -1.6
CLCNKAP51800 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.03□□□□□ -1.6
CLCNKAP51800 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.03□□□□□ -1.6
CLCNKAP51800 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.03□□□□□ -1.6
CLCNKAP51800 AC112503.2-201ENST00000609005 552 ntBASIC5.03□□□□□ -1.6
CLCNKAP51800 AC090912.3-201ENST00000609775 533 ntBASIC5.03□□□□□ -1.6
CLCNKAP51800 AC093799.2-201ENST00000610062 578 ntBASIC5.03□□□□□ -1.6
CLCNKAP51800 BANCR-201ENST00000624238 473 ntTSL 2 BASIC5.03□□□□□ -1.6
CLCNKAP51800 AP003485.1-201ENST00000625093 753 ntBASIC5.03□□□□□ -1.6
CLCNKAP51800 TMEM30CP-203ENST00000637814 1035 ntBASIC5.03□□□□□ -1.6
CLCNKAP51800 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.03□□□□□ -1.6
CLCNKAP51800 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.03□□□□□ -1.6
CLCNKAP51800 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLCNKAP51800 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CLCNKAP51800 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.03□□□□□ -1.6
CLCNKAP51800 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.03□□□□□ -1.6
CLCNKAP51800 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.03□□□□□ -1.6
CLCNKAP51800 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLCNKAP51800 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CLCNKAP51800 CASC19-221ENST00000641309 1382 ntBASIC5.03□□□□□ -1.6
CLCNKAP51800 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CLCNKAP51800 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CLCNKAP51800 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.02□□□□□ -1.61
CLCNKAP51800 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
CLCNKAP51800 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
CLCNKAP51800 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CLCNKAP51800 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
CLCNKAP51800 RNU6-31P-201ENST00000384388 108 ntBASIC5.02□□□□□ -1.61
CLCNKAP51800 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CLCNKAP51800 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CLCNKAP51800 TAF9BP2-201ENST00000400856 499 ntBASIC5.02□□□□□ -1.61
CLCNKAP51800 AL645733.1-201ENST00000402250 217 ntBASIC5.02□□□□□ -1.61
CLCNKAP51800 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.02□□□□□ -1.61
CLCNKAP51800 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC5.02□□□□□ -1.61
CLCNKAP51800 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.02□□□□□ -1.61
CLCNKAP51800 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC5.02□□□□□ -1.61
CLCNKAP51800 RPS27P18-201ENST00000431701 247 ntBASIC5.02□□□□□ -1.61
CLCNKAP51800 BX119904.1-201ENST00000432026 348 ntBASIC5.02□□□□□ -1.61
CLCNKAP51800 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CLCNKAP51800 PSMD10P3-201ENST00000437000 448 ntBASIC5.02□□□□□ -1.61
CLCNKAP51800 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.02□□□□□ -1.61
CLCNKAP51800 TCEA1P3-201ENST00000443005 880 ntBASIC5.02□□□□□ -1.61
CLCNKAP51800 AL096829.2-201ENST00000446582 742 ntBASIC5.02□□□□□ -1.61
CLCNKAP51800 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC5.02□□□□□ -1.61
CLCNKAP51800 AC093270.2-201ENST00000486157 792 ntBASIC5.02□□□□□ -1.61
CLCNKAP51800 HMGN2P25-201ENST00000486956 268 ntBASIC5.02□□□□□ -1.61
CLCNKAP51800 AC093890.1-201ENST00000502554 540 ntBASIC5.02□□□□□ -1.61
CLCNKAP51800 NDUFA5P12-201ENST00000503796 343 ntBASIC5.02□□□□□ -1.61
CLCNKAP51800 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.02□□□□□ -1.61
CLCNKAP51800 AC112518.2-201ENST00000508565 425 ntBASIC5.02□□□□□ -1.61
CLCNKAP51800 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.02□□□□□ -1.61
CLCNKAP51800 AC121161.1-201ENST00000510606 652 ntBASIC5.02□□□□□ -1.61
CLCNKAP51800 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CLCNKAP51800 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
CLCNKAP51800 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.02□□□□□ -1.61
CLCNKAP51800 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.02□□□□□ -1.61
CLCNKAP51800 AC025918.2-201ENST00000558683 763 ntBASIC5.02□□□□□ -1.61
CLCNKAP51800 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CLCNKAP51800 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CLCNKAP51800 AP005262.1-201ENST00000582646 997 ntBASIC5.02□□□□□ -1.61
CLCNKAP51800 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC5.02□□□□□ -1.61
CLCNKAP51800 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC5.02□□□□□ -1.61
CLCNKAP51800 AC133644.2-201ENST00000608142 540 ntBASIC5.02□□□□□ -1.61
CLCNKAP51800 AL050303.3-201ENST00000613704 284 ntBASIC5.02□□□□□ -1.61
CLCNKAP51800 MIR6730-201ENST00000622213 67 ntBASIC5.02□□□□□ -1.61
CLCNKAP51800 OR4G3P-201ENST00000633500 913 ntBASIC5.02□□□□□ -1.61
CLCNKAP51800 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
CLCNKAP51800 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.02□□□□□ -1.61
CLCNKAP51800 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.02□□□□□ -1.61
CLCNKAP51800 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CLCNKAP51800 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.02□□□□□ -1.61
CLCNKAP51800 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
CLCNKAP51800 AL031595.2-201ENST00000624215 19071 ntBASIC5.02□□□□□ -1.61
CLCNKAP51800 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.02□□□□□ -1.61
CLCNKAP51800 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms