Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 UBBP2-201ENST00000376781 231 ntBASIC6.39□□□□□ -1.39
MRE11P49959 RNU6-481P-201ENST00000384194 107 ntBASIC6.39□□□□□ -1.39
MRE11P49959 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
MRE11P49959 RN7SKP59-201ENST00000410520 314 ntBASIC6.39□□□□□ -1.39
MRE11P49959 RN7SKP182-201ENST00000410772 298 ntBASIC6.39□□□□□ -1.39
MRE11P49959 RNU2-22P-201ENST00000411266 212 ntBASIC6.39□□□□□ -1.39
MRE11P49959 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC6.39□□□□□ -1.39
MRE11P49959 SEPT7P8-201ENST00000413308 775 ntBASIC6.39□□□□□ -1.39
MRE11P49959 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC6.39□□□□□ -1.39
MRE11P49959 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC6.39□□□□□ -1.39
MRE11P49959 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC6.39□□□□□ -1.39
MRE11P49959 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
MRE11P49959 MGAT2P2-201ENST00000427194 797 ntBASIC6.39□□□□□ -1.39
MRE11P49959 USP9YP14-201ENST00000430663 563 ntBASIC6.39□□□□□ -1.39
MRE11P49959 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC6.39□□□□□ -1.39
MRE11P49959 TRAPPC13P1-201ENST00000435991 1062 ntBASIC6.39□□□□□ -1.39
MRE11P49959 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC6.39□□□□□ -1.39
MRE11P49959 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC6.39□□□□□ -1.39
MRE11P49959 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC6.39□□□□□ -1.39
MRE11P49959 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC6.39□□□□□ -1.39
MRE11P49959 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC6.39□□□□□ -1.39
MRE11P49959 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC6.39□□□□□ -1.39
MRE11P49959 AC147055.3-201ENST00000510547 851 ntBASIC6.39□□□□□ -1.39
MRE11P49959 IMPA1P1-201ENST00000510718 842 ntBASIC6.39□□□□□ -1.39
MRE11P49959 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.39□□□□□ -1.39
MRE11P49959 BUD31P1-201ENST00000521828 359 ntBASIC6.39□□□□□ -1.39
MRE11P49959 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC6.39□□□□□ -1.39
MRE11P49959 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.39□□□□□ -1.39
MRE11P49959 OR5D15P-201ENST00000531671 942 ntBASIC6.39□□□□□ -1.39
MRE11P49959 AP004607.2-201ENST00000533949 322 ntBASIC6.39□□□□□ -1.39
MRE11P49959 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC6.39□□□□□ -1.39
MRE11P49959 HMGN2P6-201ENST00000551091 273 ntBASIC6.39□□□□□ -1.39
MRE11P49959 STARD6-202ENST00000577499 696 ntTSL 2 BASIC6.39□□□□□ -1.39
MRE11P49959 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC6.39□□□□□ -1.39
MRE11P49959 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
MRE11P49959 MTCO3P22-201ENST00000603219 784 ntBASIC6.39□□□□□ -1.39
MRE11P49959 Z99497.2-201ENST00000603634 310 ntBASIC6.39□□□□□ -1.39
MRE11P49959 IMMP1LP3-201ENST00000604197 224 ntBASIC6.39□□□□□ -1.39
MRE11P49959 AL445222.1-201ENST00000607259 628 ntBASIC6.39□□□□□ -1.39
MRE11P49959 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC6.39□□□□□ -1.39
MRE11P49959 AL139407.1-201ENST00000613826 1175 ntBASIC6.39□□□□□ -1.39
MRE11P49959 AC008121.2-201ENST00000614647 523 ntBASIC6.39□□□□□ -1.39
MRE11P49959 uc_338.7-201ENST00000621834 124 ntBASIC6.39□□□□□ -1.39
MRE11P49959 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC6.39□□□□□ -1.39
MRE11P49959 AC017037.3-201ENST00000625016 472 ntBASIC6.39□□□□□ -1.39
MRE11P49959 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
MRE11P49959 AL672167.1-204ENST00000641875 3017 ntBASIC6.39□□□□□ -1.39
MRE11P49959 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
MRE11P49959 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
MRE11P49959 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC6.39□□□□□ -1.39
MRE11P49959 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
MRE11P49959 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC6.39□□□□□ -1.39
MRE11P49959 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
MRE11P49959 CUL4AP1-201ENST00000514750 1863 ntBASIC6.39□□□□□ -1.39
MRE11P49959 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
MRE11P49959 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC6.38□□□□□ -1.39
MRE11P49959 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
MRE11P49959 AP005432.1-201ENST00000580891 3485 ntBASIC6.38□□□□□ -1.39
MRE11P49959 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
MRE11P49959 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC6.38□□□□□ -1.39
MRE11P49959 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
MRE11P49959 MIR130A-201ENST00000385274 89 ntBASIC6.38□□□□□ -1.39
MRE11P49959 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC6.38□□□□□ -1.39
MRE11P49959 SNRPEP6-201ENST00000407465 277 ntBASIC6.38□□□□□ -1.39
MRE11P49959 MIR1302-8-201ENST00000408342 128 ntBASIC6.38□□□□□ -1.39
MRE11P49959 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
MRE11P49959 RPL34P3-201ENST00000421454 338 ntBASIC6.38□□□□□ -1.39
MRE11P49959 AC130360.1-201ENST00000425489 1117 ntBASIC6.38□□□□□ -1.39
MRE11P49959 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC6.38□□□□□ -1.39
MRE11P49959 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC6.38□□□□□ -1.39
MRE11P49959 IGBP1P3-201ENST00000447449 1000 ntBASIC6.38□□□□□ -1.39
MRE11P49959 AC005532.2-201ENST00000467154 373 ntBASIC6.38□□□□□ -1.39
MRE11P49959 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC6.38□□□□□ -1.39
MRE11P49959 AC022336.1-201ENST00000475510 337 ntBASIC6.38□□□□□ -1.39
MRE11P49959 RN7SL193P-201ENST00000491708 276 ntBASIC6.38□□□□□ -1.39
MRE11P49959 TPT1P3-201ENST00000492841 512 ntBASIC6.38□□□□□ -1.39
MRE11P49959 RN7SL808P-201ENST00000496066 299 ntBASIC6.38□□□□□ -1.39
MRE11P49959 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC6.38□□□□□ -1.39
MRE11P49959 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.38□□□□□ -1.39
MRE11P49959 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC6.38□□□□□ -1.39
MRE11P49959 AC130365.2-201ENST00000525882 1201 ntBASIC6.38□□□□□ -1.39
MRE11P49959 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC6.38□□□□□ -1.39
MRE11P49959 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC6.38□□□□□ -1.39
MRE11P49959 AC006349.1-201ENST00000555526 235 ntBASIC6.38□□□□□ -1.39
MRE11P49959 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
MRE11P49959 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC6.38□□□□□ -1.39
MRE11P49959 AC109446.2-201ENST00000567872 497 ntBASIC6.38□□□□□ -1.39
MRE11P49959 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.38□□□□□ -1.39
MRE11P49959 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC6.38□□□□□ -1.39
MRE11P49959 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.38□□□□□ -1.39
MRE11P49959 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC6.38□□□□□ -1.39
MRE11P49959 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC6.38□□□□□ -1.39
MRE11P49959 AL109653.1-201ENST00000603091 248 ntBASIC6.38□□□□□ -1.39
MRE11P49959 AL353778.1-201ENST00000603149 408 ntBASIC6.38□□□□□ -1.39
MRE11P49959 AC009704.2-201ENST00000618739 483 ntBASIC6.38□□□□□ -1.39
MRE11P49959 AC068870.2-201ENST00000620635 389 ntBASIC6.38□□□□□ -1.39
MRE11P49959 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC6.38□□□□□ -1.39
MRE11P49959 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.38□□□□□ -1.39
MRE11P49959 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
MRE11P49959 AC073869.10-201ENST00000642016 354 ntBASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms