Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC5.85□□□□□ -1.47
RFC4P35249 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RFC4P35249 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
RFC4P35249 AL136164.3-201ENST00000624429 3978 ntBASIC5.84□□□□□ -1.47
RFC4P35249 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.84□□□□□ -1.47
RFC4P35249 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
RFC4P35249 RNA5SP366-201ENST00000365454 123 ntBASIC5.84□□□□□ -1.47
RFC4P35249 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC5.84□□□□□ -1.47
RFC4P35249 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.84□□□□□ -1.47
RFC4P35249 AC013268.2-201ENST00000420753 337 ntBASIC5.84□□□□□ -1.47
RFC4P35249 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC5.84□□□□□ -1.47
RFC4P35249 RPS3AP54-201ENST00000435535 734 ntBASIC5.84□□□□□ -1.47
RFC4P35249 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.84□□□□□ -1.47
RFC4P35249 Z95327.1-201ENST00000446082 482 ntBASIC5.84□□□□□ -1.47
RFC4P35249 PHBP16-201ENST00000446318 950 ntBASIC5.84□□□□□ -1.47
RFC4P35249 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.84□□□□□ -1.47
RFC4P35249 AC025164.1-201ENST00000496249 478 ntBASIC5.84□□□□□ -1.47
RFC4P35249 AP003730.1-201ENST00000524605 285 ntBASIC5.84□□□□□ -1.47
RFC4P35249 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.84□□□□□ -1.47
RFC4P35249 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.84□□□□□ -1.47
RFC4P35249 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC5.84□□□□□ -1.47
RFC4P35249 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.84□□□□□ -1.47
RFC4P35249 GLRXP2-201ENST00000555594 321 ntBASIC5.84□□□□□ -1.47
RFC4P35249 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC5.84□□□□□ -1.47
RFC4P35249 RN7SL176P-201ENST00000580352 264 ntBASIC5.84□□□□□ -1.47
RFC4P35249 RNA5SP439-201ENST00000617595 124 ntBASIC5.84□□□□□ -1.47
RFC4P35249 AC011815.3-201ENST00000624194 473 ntBASIC5.84□□□□□ -1.47
RFC4P35249 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
RFC4P35249 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.84□□□□□ -1.47
RFC4P35249 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.84□□□□□ -1.47
RFC4P35249 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
RFC4P35249 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.84□□□□□ -1.48
RFC4P35249 AC125257.1-201ENST00000560400 2930 ntBASIC5.84□□□□□ -1.48
RFC4P35249 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC5.84□□□□□ -1.48
RFC4P35249 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.48
RFC4P35249 AC092111.2-201ENST00000611627 1414 ntBASIC5.83□□□□□ -1.48
RFC4P35249 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.83□□□□□ -1.48
RFC4P35249 AC090017.1-201ENST00000548612 1779 ntBASIC5.83□□□□□ -1.48
RFC4P35249 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.83□□□□□ -1.48
RFC4P35249 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RFC4P35249 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
RFC4P35249 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.83□□□□□ -1.48
RFC4P35249 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
RFC4P35249 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RFC4P35249 SDHCP2-201ENST00000398565 501 ntBASIC5.83□□□□□ -1.48
RFC4P35249 AL354766.1-201ENST00000423396 542 ntBASIC5.83□□□□□ -1.48
RFC4P35249 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC5.83□□□□□ -1.48
RFC4P35249 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RFC4P35249 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.83□□□□□ -1.48
RFC4P35249 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.83□□□□□ -1.48
RFC4P35249 RPS7P7-201ENST00000463499 571 ntBASIC5.83□□□□□ -1.48
RFC4P35249 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.83□□□□□ -1.48
RFC4P35249 AC017007.3-201ENST00000479865 435 ntBASIC5.83□□□□□ -1.48
RFC4P35249 AC023424.1-201ENST00000496058 459 ntBASIC5.83□□□□□ -1.48
RFC4P35249 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.83□□□□□ -1.48
RFC4P35249 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.83□□□□□ -1.48
RFC4P35249 PARP4P3-201ENST00000510265 317 ntBASIC5.83□□□□□ -1.48
RFC4P35249 SAP18P1-201ENST00000512058 390 ntBASIC5.83□□□□□ -1.48
RFC4P35249 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RFC4P35249 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC5.83□□□□□ -1.48
RFC4P35249 MIR4429-201ENST00000580105 73 ntBASIC5.83□□□□□ -1.48
RFC4P35249 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.83□□□□□ -1.48
RFC4P35249 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.83□□□□□ -1.48
RFC4P35249 AC026367.3-201ENST00000619032 590 ntBASIC5.83□□□□□ -1.48
RFC4P35249 MIR3653-201ENST00000625572 110 ntBASIC5.83□□□□□ -1.48
RFC4P35249 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC5.83□□□□□ -1.48
RFC4P35249 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
RFC4P35249 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RFC4P35249 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.83□□□□□ -1.48
RFC4P35249 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RFC4P35249 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.83□□□□□ -1.48
RFC4P35249 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.83□□□□□ -1.48
RFC4P35249 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
RFC4P35249 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
RFC4P35249 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.83□□□□□ -1.48
RFC4P35249 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.82□□□□□ -1.48
RFC4P35249 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.82□□□□□ -1.48
RFC4P35249 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
RFC4P35249 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RFC4P35249 AC005261.4-201ENST00000600047 1385 ntBASIC5.82□□□□□ -1.48
RFC4P35249 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.82□□□□□ -1.48
RFC4P35249 AC022417.1-201ENST00000624768 1303 ntBASIC5.82□□□□□ -1.48
RFC4P35249 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RFC4P35249 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RFC4P35249 RN7SKP224-201ENST00000364140 325 ntBASIC5.82□□□□□ -1.48
RFC4P35249 RN7SKP280-201ENST00000364196 304 ntBASIC5.82□□□□□ -1.48
RFC4P35249 RNU1-13P-201ENST00000384499 162 ntBASIC5.82□□□□□ -1.48
RFC4P35249 RNA5SP317-201ENST00000410176 116 ntBASIC5.82□□□□□ -1.48
RFC4P35249 RNA5SP311-201ENST00000411290 116 ntBASIC5.82□□□□□ -1.48
RFC4P35249 CEACAMP8-201ENST00000413902 580 ntBASIC5.82□□□□□ -1.48
RFC4P35249 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC5.82□□□□□ -1.48
RFC4P35249 RPL5P2-201ENST00000429598 854 ntBASIC5.82□□□□□ -1.48
RFC4P35249 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC5.82□□□□□ -1.48
RFC4P35249 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC5.82□□□□□ -1.48
RFC4P35249 OR52E3P-201ENST00000452083 936 ntBASIC5.82□□□□□ -1.48
RFC4P35249 AC034236.1-201ENST00000469891 373 ntBASIC5.82□□□□□ -1.48
RFC4P35249 AC073073.1-201ENST00000493920 463 ntBASIC5.82□□□□□ -1.48
RFC4P35249 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.82□□□□□ -1.48
RFC4P35249 RNA5SP315-201ENST00000516340 116 ntBASIC5.82□□□□□ -1.48
RFC4P35249 RNA5SP312-201ENST00000517068 116 ntBASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 148.3 ms