Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 MIR6071-201ENST00000616741 78 ntBASIC4.08□□□□□ -1.76
HLA-DMAP28067 AC103858.2-201ENST00000621471 543 ntBASIC4.08□□□□□ -1.76
HLA-DMAP28067 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.08□□□□□ -1.76
HLA-DMAP28067 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.08□□□□□ -1.76
HLA-DMAP28067 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DMAP28067 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.07□□□□□ -1.76
HLA-DMAP28067 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.07□□□□□ -1.76
HLA-DMAP28067 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HLA-DMAP28067 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
HLA-DMAP28067 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
HLA-DMAP28067 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HLA-DMAP28067 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HLA-DMAP28067 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
HLA-DMAP28067 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HLA-DMAP28067 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC4.07□□□□□ -1.76
HLA-DMAP28067 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC4.07□□□□□ -1.76
HLA-DMAP28067 RNA5SP284-201ENST00000384547 118 ntBASIC4.07□□□□□ -1.76
HLA-DMAP28067 RAB5CP1-201ENST00000395972 580 ntBASIC4.07□□□□□ -1.76
HLA-DMAP28067 AL021331.1-201ENST00000402817 582 ntBASIC4.07□□□□□ -1.76
HLA-DMAP28067 ARL4AP5-201ENST00000404372 599 ntBASIC4.07□□□□□ -1.76
HLA-DMAP28067 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
HLA-DMAP28067 RN7SKP167-201ENST00000411047 285 ntBASIC4.07□□□□□ -1.76
HLA-DMAP28067 UBTFL3-201ENST00000418934 1024 ntBASIC4.07□□□□□ -1.76
HLA-DMAP28067 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HLA-DMAP28067 AL451139.1-201ENST00000434718 346 ntBASIC4.07□□□□□ -1.76
HLA-DMAP28067 CYCSP11-201ENST00000436426 315 ntBASIC4.07□□□□□ -1.76
HLA-DMAP28067 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.07□□□□□ -1.76
HLA-DMAP28067 ELOCP8-201ENST00000439309 332 ntBASIC4.07□□□□□ -1.76
HLA-DMAP28067 ELOCP15-201ENST00000442090 332 ntBASIC4.07□□□□□ -1.76
HLA-DMAP28067 RPS27AP15-201ENST00000447672 466 ntBASIC4.07□□□□□ -1.76
HLA-DMAP28067 UBTFL6-201ENST00000477929 1024 ntBASIC4.07□□□□□ -1.76
HLA-DMAP28067 RN7SL727P-201ENST00000482164 296 ntBASIC4.07□□□□□ -1.76
HLA-DMAP28067 AC090142.2-201ENST00000483263 416 ntBASIC4.07□□□□□ -1.76
HLA-DMAP28067 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.07□□□□□ -1.76
HLA-DMAP28067 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC4.07□□□□□ -1.76
HLA-DMAP28067 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.07□□□□□ -1.76
HLA-DMAP28067 PARP4P3-201ENST00000510265 317 ntBASIC4.07□□□□□ -1.76
HLA-DMAP28067 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.07□□□□□ -1.76
HLA-DMAP28067 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.07□□□□□ -1.76
HLA-DMAP28067 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC4.07□□□□□ -1.76
HLA-DMAP28067 AC107016.1-201ENST00000550463 337 ntBASIC4.07□□□□□ -1.76
HLA-DMAP28067 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.07□□□□□ -1.76
HLA-DMAP28067 AC010200.2-201ENST00000605098 235 ntBASIC4.07□□□□□ -1.76
HLA-DMAP28067 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.07□□□□□ -1.76
HLA-DMAP28067 AC090527.3-201ENST00000619041 548 ntBASIC4.07□□□□□ -1.76
HLA-DMAP28067 AP006248.2-201ENST00000623309 592 ntBASIC4.07□□□□□ -1.76
HLA-DMAP28067 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.07□□□□□ -1.76
HLA-DMAP28067 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.07□□□□□ -1.76
HLA-DMAP28067 MIR6715B-201ENST00000637172 77 ntBASIC4.07□□□□□ -1.76
HLA-DMAP28067 AC015813.6-201ENST00000624409 5808 ntBASIC4.07□□□□□ -1.76
HLA-DMAP28067 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
HLA-DMAP28067 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HLA-DMAP28067 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HLA-DMAP28067 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC4.07□□□□□ -1.76
HLA-DMAP28067 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HLA-DMAP28067 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
HLA-DMAP28067 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
HLA-DMAP28067 AC011493.1-201ENST00000596753 1632 ntBASIC4.06□□□□□ -1.76
HLA-DMAP28067 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
HLA-DMAP28067 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HLA-DMAP28067 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.06□□□□□ -1.76
HLA-DMAP28067 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
HLA-DMAP28067 AL136164.3-201ENST00000624429 3978 ntBASIC4.06□□□□□ -1.76
HLA-DMAP28067 AC009951.1-201ENST00000623674 2614 ntBASIC4.06□□□□□ -1.76
HLA-DMAP28067 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.06□□□□□ -1.76
HLA-DMAP28067 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
HLA-DMAP28067 RNA5SP510-201ENST00000364697 99 ntBASIC4.06□□□□□ -1.76
HLA-DMAP28067 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HLA-DMAP28067 AC009804.1-201ENST00000400949 179 ntBASIC4.06□□□□□ -1.76
HLA-DMAP28067 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.06□□□□□ -1.76
HLA-DMAP28067 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.06□□□□□ -1.76
HLA-DMAP28067 TBCAP2-201ENST00000416175 326 ntBASIC4.06□□□□□ -1.76
HLA-DMAP28067 RPL7P57-201ENST00000423238 740 ntBASIC4.06□□□□□ -1.76
HLA-DMAP28067 RWDD4P2-201ENST00000426392 563 ntBASIC4.06□□□□□ -1.76
HLA-DMAP28067 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.06□□□□□ -1.76
HLA-DMAP28067 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.06□□□□□ -1.76
HLA-DMAP28067 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.06□□□□□ -1.76
HLA-DMAP28067 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.06□□□□□ -1.76
HLA-DMAP28067 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.06□□□□□ -1.76
HLA-DMAP28067 HMGN1P36-201ENST00000446623 298 ntBASIC4.06□□□□□ -1.76
HLA-DMAP28067 AC000111.2-201ENST00000448200 210 ntBASIC4.06□□□□□ -1.76
HLA-DMAP28067 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.06□□□□□ -1.76
HLA-DMAP28067 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC4.06□□□□□ -1.76
HLA-DMAP28067 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.06□□□□□ -1.76
HLA-DMAP28067 AC096741.1-201ENST00000472250 846 ntBASIC4.06□□□□□ -1.76
HLA-DMAP28067 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.06□□□□□ -1.76
HLA-DMAP28067 RWDD4P1-201ENST00000488019 565 ntBASIC4.06□□□□□ -1.76
HLA-DMAP28067 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC4.06□□□□□ -1.76
HLA-DMAP28067 AC146944.2-203ENST00000502493 354 ntBASIC4.06□□□□□ -1.76
HLA-DMAP28067 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HLA-DMAP28067 AC139495.1-202ENST00000513164 354 ntBASIC4.06□□□□□ -1.76
HLA-DMAP28067 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.06□□□□□ -1.76
HLA-DMAP28067 AC022826.1-201ENST00000519383 805 ntBASIC4.06□□□□□ -1.76
HLA-DMAP28067 BUD31P1-201ENST00000521828 359 ntBASIC4.06□□□□□ -1.76
HLA-DMAP28067 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.06□□□□□ -1.76
HLA-DMAP28067 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC4.06□□□□□ -1.76
HLA-DMAP28067 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC4.06□□□□□ -1.76
HLA-DMAP28067 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.06□□□□□ -1.76
HLA-DMAP28067 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC4.06□□□□□ -1.76
HLA-DMAP28067 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms