Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 RNU4-39P-201ENST00000362455 127 ntBASIC5.84□□□□□ -1.48
POLR2AP24928 HMGB3P19-201ENST00000403971 560 ntBASIC5.84□□□□□ -1.48
POLR2AP24928 UBE2V1P9-201ENST00000414760 368 ntBASIC5.84□□□□□ -1.48
POLR2AP24928 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
POLR2AP24928 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC5.84□□□□□ -1.48
POLR2AP24928 AL389915.1-201ENST00000422463 466 ntBASIC5.84□□□□□ -1.48
POLR2AP24928 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.84□□□□□ -1.48
POLR2AP24928 RPL12P34-201ENST00000424532 479 ntBASIC5.84□□□□□ -1.48
POLR2AP24928 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC5.84□□□□□ -1.48
POLR2AP24928 RPS29P9-201ENST00000440360 171 ntBASIC5.84□□□□□ -1.48
POLR2AP24928 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC5.84□□□□□ -1.48
POLR2AP24928 RPS5P7-201ENST00000456664 608 ntBASIC5.84□□□□□ -1.48
POLR2AP24928 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.84□□□□□ -1.48
POLR2AP24928 RNU6-889P-201ENST00000517189 103 ntBASIC5.84□□□□□ -1.48
POLR2AP24928 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5.84□□□□□ -1.48
POLR2AP24928 GLRXP2-201ENST00000555594 321 ntBASIC5.84□□□□□ -1.48
POLR2AP24928 AC023825.1-201ENST00000566704 1030 ntBASIC5.84□□□□□ -1.48
POLR2AP24928 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.84□□□□□ -1.48
POLR2AP24928 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC5.84□□□□□ -1.48
POLR2AP24928 AC069366.1-201ENST00000583159 838 ntBASIC5.84□□□□□ -1.48
POLR2AP24928 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC5.84□□□□□ -1.48
POLR2AP24928 RPL12P25-202ENST00000598100 674 ntBASIC5.84□□□□□ -1.48
POLR2AP24928 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC5.84□□□□□ -1.48
POLR2AP24928 AL356218.2-201ENST00000605264 187 ntBASIC5.84□□□□□ -1.48
POLR2AP24928 MIR6133-201ENST00000617057 108 ntBASIC5.84□□□□□ -1.48
POLR2AP24928 FTO-223ENST00000640179 210 ntTSL 5 BASIC5.84□□□□□ -1.48
POLR2AP24928 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
POLR2AP24928 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC5.84□□□□□ -1.48
POLR2AP24928 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
POLR2AP24928 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
POLR2AP24928 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.83□□□□□ -1.48
POLR2AP24928 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
POLR2AP24928 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
POLR2AP24928 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
POLR2AP24928 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
POLR2AP24928 MTND4P4-201ENST00000439033 1366 ntBASIC5.83□□□□□ -1.48
POLR2AP24928 AC009779.8-201ENST00000641684 4384 ntBASIC5.83□□□□□ -1.48
POLR2AP24928 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
POLR2AP24928 U3.10-201ENST00000364459 214 ntBASIC5.83□□□□□ -1.48
POLR2AP24928 RNU1-59P-201ENST00000364829 162 ntBASIC5.83□□□□□ -1.48
POLR2AP24928 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
POLR2AP24928 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
POLR2AP24928 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC5.83□□□□□ -1.48
POLR2AP24928 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC5.83□□□□□ -1.48
POLR2AP24928 AL732292.1-201ENST00000426692 226 ntBASIC5.83□□□□□ -1.48
POLR2AP24928 RPS6P15-201ENST00000431996 751 ntBASIC5.83□□□□□ -1.48
POLR2AP24928 AL392003.1-201ENST00000434394 243 ntBASIC5.83□□□□□ -1.48
POLR2AP24928 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC5.83□□□□□ -1.48
POLR2AP24928 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC5.83□□□□□ -1.48
POLR2AP24928 PRELID3BP7-201ENST00000503606 469 ntBASIC5.83□□□□□ -1.48
POLR2AP24928 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
POLR2AP24928 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
POLR2AP24928 DUXAP5-201ENST00000529668 529 ntBASIC5.83□□□□□ -1.48
POLR2AP24928 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC5.83□□□□□ -1.48
POLR2AP24928 OSBPL9P3-201ENST00000534523 595 ntBASIC5.83□□□□□ -1.48
POLR2AP24928 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC5.83□□□□□ -1.48
POLR2AP24928 AC018558.5-201ENST00000565840 952 ntBASIC5.83□□□□□ -1.48
POLR2AP24928 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC5.83□□□□□ -1.48
POLR2AP24928 AL139344.1-201ENST00000605228 195 ntBASIC5.83□□□□□ -1.48
POLR2AP24928 AC135507.1-201ENST00000607214 561 ntBASIC5.83□□□□□ -1.48
POLR2AP24928 AC100847.1-201ENST00000611316 481 ntBASIC5.83□□□□□ -1.48
POLR2AP24928 U1.25-201ENST00000614085 162 ntBASIC5.83□□□□□ -1.48
POLR2AP24928 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
POLR2AP24928 MIR1264-201ENST00000616374 69 ntBASIC5.83□□□□□ -1.48
POLR2AP24928 U1.34-201ENST00000618578 162 ntBASIC5.83□□□□□ -1.48
POLR2AP24928 U1.31-201ENST00000620022 160 ntBASIC5.83□□□□□ -1.48
POLR2AP24928 AL049536.1-201ENST00000625043 744 ntBASIC5.83□□□□□ -1.48
POLR2AP24928 FRG1EP-201ENST00000634469 770 ntBASIC5.83□□□□□ -1.48
POLR2AP24928 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
POLR2AP24928 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
POLR2AP24928 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC5.83□□□□□ -1.48
POLR2AP24928 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.83□□□□□ -1.48
POLR2AP24928 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
POLR2AP24928 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
POLR2AP24928 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
POLR2AP24928 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
POLR2AP24928 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
POLR2AP24928 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
POLR2AP24928 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.82□□□□□ -1.48
POLR2AP24928 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
POLR2AP24928 AL451142.1-201ENST00000375867 775 ntBASIC5.82□□□□□ -1.48
POLR2AP24928 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
POLR2AP24928 LRRC37BP1-201ENST00000398851 714 ntBASIC5.82□□□□□ -1.48
POLR2AP24928 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.82□□□□□ -1.48
POLR2AP24928 GLS-203ENST00000409215 632 ntTSL 4 BASIC5.82□□□□□ -1.48
POLR2AP24928 RPL22P18-201ENST00000417197 377 ntBASIC5.82□□□□□ -1.48
POLR2AP24928 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC5.82□□□□□ -1.48
POLR2AP24928 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
POLR2AP24928 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.82□□□□□ -1.48
POLR2AP24928 AC126121.1-201ENST00000482313 553 ntBASIC5.82□□□□□ -1.48
POLR2AP24928 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC5.82□□□□□ -1.48
POLR2AP24928 RPS24P16-201ENST00000497294 392 ntBASIC5.82□□□□□ -1.48
POLR2AP24928 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.82□□□□□ -1.48
POLR2AP24928 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.82□□□□□ -1.48
POLR2AP24928 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC5.82□□□□□ -1.48
POLR2AP24928 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.82□□□□□ -1.48
POLR2AP24928 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC5.82□□□□□ -1.48
POLR2AP24928 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.82□□□□□ -1.48
POLR2AP24928 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.82□□□□□ -1.48
POLR2AP24928 AL022067.1-201ENST00000602426 454 ntBASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms