Protein–RNA interactions for Protein: P23469

PTPRE, Receptor-type tyrosine-protein phosphatase epsilon, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPREP23469 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC8.3□□□□□ -1.08
PTPREP23469 AC026898.1-201ENST00000586404 571 ntBASIC8.3□□□□□ -1.08
PTPREP23469 AL133338.2-201ENST00000604292 736 ntBASIC8.3□□□□□ -1.08
PTPREP23469 AC097381.3-201ENST00000608962 462 ntBASIC8.3□□□□□ -1.08
PTPREP23469 uc_338.15-201ENST00000615470 191 ntBASIC8.3□□□□□ -1.08
PTPREP23469 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
PTPREP23469 AC009161.2-201ENST00000624626 138 ntBASIC8.3□□□□□ -1.08
PTPREP23469 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC8.3□□□□□ -1.08
PTPREP23469 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
PTPREP23469 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC8.3□□□□□ -1.08
PTPREP23469 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
PTPREP23469 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
PTPREP23469 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
PTPREP23469 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC8.3□□□□□ -1.08
PTPREP23469 CCDC150P1-201ENST00000537123 2215 ntBASIC8.3□□□□□ -1.08
PTPREP23469 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC8.3□□□□□ -1.08
PTPREP23469 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC8.3□□□□□ -1.08
PTPREP23469 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC8.3□□□□□ -1.08
PTPREP23469 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
PTPREP23469 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
PTPREP23469 TSHZ2-203ENST00000603338 3803 ntTSL 2 BASIC8.29□□□□□ -1.08
PTPREP23469 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC8.29□□□□□ -1.08
PTPREP23469 TMC3-AS1-206ENST00000612811 2726 ntBASIC8.29□□□□□ -1.08
PTPREP23469 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
PTPREP23469 SUGT1P1-201ENST00000379514 476 ntBASIC8.29□□□□□ -1.08
PTPREP23469 CD3D-202ENST00000392884 476 ntTSL 2 BASIC8.29□□□□□ -1.08
PTPREP23469 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
PTPREP23469 AL136100.1-201ENST00000407696 330 ntBASIC8.29□□□□□ -1.08
PTPREP23469 SNORA11C-201ENST00000408532 129 ntBASIC8.29□□□□□ -1.08
PTPREP23469 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC8.29□□□□□ -1.08
PTPREP23469 CHEK2P3-201ENST00000416118 248 ntBASIC8.29□□□□□ -1.08
PTPREP23469 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC8.29□□□□□ -1.08
PTPREP23469 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC8.29□□□□□ -1.08
PTPREP23469 HIGD1AP8-201ENST00000453927 274 ntBASIC8.29□□□□□ -1.08
PTPREP23469 TRBV1-201ENST00000476502 284 ntBASIC8.29□□□□□ -1.08
PTPREP23469 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC8.29□□□□□ -1.08
PTPREP23469 AL117692.1-201ENST00000494283 713 ntBASIC8.29□□□□□ -1.08
PTPREP23469 AC106872.3-201ENST00000495104 446 ntBASIC8.29□□□□□ -1.08
PTPREP23469 RN7SL649P-201ENST00000496974 275 ntBASIC8.29□□□□□ -1.08
PTPREP23469 TTC39CP1-201ENST00000512513 755 ntBASIC8.29□□□□□ -1.08
PTPREP23469 Vault.2-201ENST00000516519 98 ntBASIC8.29□□□□□ -1.08
PTPREP23469 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC8.29□□□□□ -1.08
PTPREP23469 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC8.29□□□□□ -1.08
PTPREP23469 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
PTPREP23469 AC024405.1-201ENST00000532521 1042 ntBASIC8.29□□□□□ -1.08
PTPREP23469 APOOP3-201ENST00000536787 586 ntBASIC8.29□□□□□ -1.08
PTPREP23469 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC8.29□□□□□ -1.08
PTPREP23469 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC8.29□□□□□ -1.08
PTPREP23469 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC8.29□□□□□ -1.08
PTPREP23469 XIST-210ENST00000602863 775 ntTSL 3 BASIC8.29□□□□□ -1.08
PTPREP23469 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
PTPREP23469 AC007012.2-201ENST00000623206 1676 ntBASIC8.29□□□□□ -1.08
PTPREP23469 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC8.29□□□□□ -1.08
PTPREP23469 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC8.29□□□□□ -1.08
PTPREP23469 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
PTPREP23469 MEF2C-217ENST00000510942 3446 ntTSL 5 BASIC8.29□□□□□ -1.08
PTPREP23469 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
PTPREP23469 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC8.29□□□□□ -1.08
PTPREP23469 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
PTPREP23469 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
PTPREP23469 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC8.28□□□□□ -1.08
PTPREP23469 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
PTPREP23469 AC097634.1-201ENST00000604491 2467 ntBASIC8.28□□□□□ -1.08
PTPREP23469 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
PTPREP23469 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC8.28□□□□□ -1.08
PTPREP23469 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
PTPREP23469 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
PTPREP23469 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
PTPREP23469 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
PTPREP23469 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
PTPREP23469 CLCN5-201ENST00000307367 3177 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
PTPREP23469 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC8.28□□□□□ -1.08
PTPREP23469 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
PTPREP23469 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
PTPREP23469 AC092634.1-201ENST00000366505 199 ntBASIC8.28□□□□□ -1.08
PTPREP23469 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
PTPREP23469 MIR191-201ENST00000384873 92 ntBASIC8.28□□□□□ -1.08
PTPREP23469 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
PTPREP23469 AL583835.1-201ENST00000399570 407 ntBASIC8.28□□□□□ -1.08
PTPREP23469 RPL7P10-201ENST00000417407 739 ntBASIC8.28□□□□□ -1.08
PTPREP23469 AC114752.2-201ENST00000424119 404 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
PTPREP23469 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC8.28□□□□□ -1.08
PTPREP23469 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC8.28□□□□□ -1.08
PTPREP23469 AC096644.2-201ENST00000429278 159 ntBASIC8.28□□□□□ -1.08
PTPREP23469 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC8.28□□□□□ -1.08
PTPREP23469 AC234771.4-201ENST00000441416 730 ntBASIC8.28□□□□□ -1.08
PTPREP23469 GAPDHP53-201ENST00000458397 924 ntBASIC8.28□□□□□ -1.08
PTPREP23469 RPS4XP10-201ENST00000465034 731 ntBASIC8.28□□□□□ -1.08
PTPREP23469 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC8.28□□□□□ -1.08
PTPREP23469 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC8.28□□□□□ -1.08
PTPREP23469 AC013356.1-201ENST00000489027 564 ntBASIC8.28□□□□□ -1.08
PTPREP23469 HMGB3P17-201ENST00000504195 649 ntBASIC8.28□□□□□ -1.08
PTPREP23469 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC8.28□□□□□ -1.08
PTPREP23469 DCAF13P2-201ENST00000514188 555 ntBASIC8.28□□□□□ -1.08
PTPREP23469 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC8.28□□□□□ -1.08
PTPREP23469 AC120036.3-201ENST00000517826 292 ntBASIC8.28□□□□□ -1.08
PTPREP23469 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC8.28□□□□□ -1.08
PTPREP23469 OR5D2P-201ENST00000524390 911 ntBASIC8.28□□□□□ -1.08
PTPREP23469 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC8.28□□□□□ -1.08
PTPREP23469 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC8.28□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms