Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC233280.2-201ENST00000603917 1070 ntBASIC4.96□□□□□ -1.62
CDH3P22223 AC135803.1-201ENST00000608748 565 ntBASIC4.96□□□□□ -1.62
CDH3P22223 AC093799.2-201ENST00000610062 578 ntBASIC4.96□□□□□ -1.62
CDH3P22223 AP002371.2-201ENST00000624450 503 ntBASIC4.96□□□□□ -1.62
CDH3P22223 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
CDH3P22223 AL450345.1-202ENST00000605741 3881 ntBASIC4.96□□□□□ -1.62
CDH3P22223 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
CDH3P22223 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CDH3P22223 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CDH3P22223 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
CDH3P22223 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CDH3P22223 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.95□□□□□ -1.62
CDH3P22223 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
CDH3P22223 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CDH3P22223 BX005019.1-201ENST00000561881 1810 ntBASIC4.95□□□□□ -1.62
CDH3P22223 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
CDH3P22223 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
CDH3P22223 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CDH3P22223 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CDH3P22223 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.95□□□□□ -1.62
CDH3P22223 AL512283.1-201ENST00000606756 1384 ntBASIC4.95□□□□□ -1.62
CDH3P22223 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CDH3P22223 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CDH3P22223 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
CDH3P22223 SNORD51.1-201ENST00000365405 77 ntBASIC4.95□□□□□ -1.62
CDH3P22223 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CDH3P22223 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CDH3P22223 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CDH3P22223 AC093719.1-202ENST00000392735 373 ntBASIC4.95□□□□□ -1.62
CDH3P22223 RN7SKP114-201ENST00000410327 279 ntBASIC4.95□□□□□ -1.62
CDH3P22223 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.95□□□□□ -1.62
CDH3P22223 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.95□□□□□ -1.62
CDH3P22223 AC099336.2-201ENST00000422457 254 ntBASIC4.95□□□□□ -1.62
CDH3P22223 OR5M12P-201ENST00000423388 929 ntBASIC4.95□□□□□ -1.62
CDH3P22223 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.95□□□□□ -1.62
CDH3P22223 AL606490.7-201ENST00000433136 191 ntBASIC4.95□□□□□ -1.62
CDH3P22223 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CDH3P22223 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC4.95□□□□□ -1.62
CDH3P22223 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.95□□□□□ -1.62
CDH3P22223 FHP1-201ENST00000442741 703 ntBASIC4.95□□□□□ -1.62
CDH3P22223 AC090804.1-201ENST00000448870 490 ntBASIC4.95□□□□□ -1.62
CDH3P22223 MTND2P30-201ENST00000456663 382 ntBASIC4.95□□□□□ -1.62
CDH3P22223 AC099560.2-201ENST00000457554 255 ntBASIC4.95□□□□□ -1.62
CDH3P22223 AC108161.1-201ENST00000461060 402 ntBASIC4.95□□□□□ -1.62
CDH3P22223 HMGN2P25-201ENST00000486956 268 ntBASIC4.95□□□□□ -1.62
CDH3P22223 RN7SL814P-201ENST00000487715 300 ntBASIC4.95□□□□□ -1.62
CDH3P22223 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC4.95□□□□□ -1.62
CDH3P22223 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC4.95□□□□□ -1.62
CDH3P22223 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC4.95□□□□□ -1.62
CDH3P22223 SNORA26.10-201ENST00000516427 141 ntBASIC4.95□□□□□ -1.62
CDH3P22223 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.95□□□□□ -1.62
CDH3P22223 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.95□□□□□ -1.62
CDH3P22223 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.95□□□□□ -1.62
CDH3P22223 AP000676.2-201ENST00000529711 301 ntBASIC4.95□□□□□ -1.62
CDH3P22223 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.95□□□□□ -1.62
CDH3P22223 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.95□□□□□ -1.62
CDH3P22223 AC008536.1-201ENST00000602872 669 ntBASIC4.95□□□□□ -1.62
CDH3P22223 AL671309.1-201ENST00000603750 544 ntBASIC4.95□□□□□ -1.62
CDH3P22223 BNIP3P35-201ENST00000604530 490 ntBASIC4.95□□□□□ -1.62
CDH3P22223 CR589904.2-201ENST00000612533 440 ntBASIC4.95□□□□□ -1.62
CDH3P22223 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CDH3P22223 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CDH3P22223 AL133370.2-201ENST00000619934 439 ntBASIC4.95□□□□□ -1.62
CDH3P22223 AC021106.3-201ENST00000623925 531 ntBASIC4.95□□□□□ -1.62
CDH3P22223 AC019080.5-201ENST00000624891 757 ntBASIC4.95□□□□□ -1.62
CDH3P22223 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.95□□□□□ -1.62
CDH3P22223 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.95□□□□□ -1.62
CDH3P22223 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.95□□□□□ -1.62
CDH3P22223 CASC19-204ENST00000641001 2055 ntBASIC4.95□□□□□ -1.62
CDH3P22223 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CDH3P22223 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CDH3P22223 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC4.95□□□□□ -1.62
CDH3P22223 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CDH3P22223 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CDH3P22223 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CDH3P22223 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CDH3P22223 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CDH3P22223 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
CDH3P22223 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.94□□□□□ -1.62
CDH3P22223 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
CDH3P22223 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.94□□□□□ -1.62
CDH3P22223 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
CDH3P22223 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CDH3P22223 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.94□□□□□ -1.62
CDH3P22223 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
CDH3P22223 AP001002.1-201ENST00000625148 1513 ntBASIC4.94□□□□□ -1.62
CDH3P22223 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.94□□□□□ -1.62
CDH3P22223 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.94□□□□□ -1.62
CDH3P22223 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
CDH3P22223 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CDH3P22223 RN7SKP113-201ENST00000363891 295 ntBASIC4.94□□□□□ -1.62
CDH3P22223 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CDH3P22223 RN7SKP125-201ENST00000410481 302 ntBASIC4.94□□□□□ -1.62
CDH3P22223 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.94□□□□□ -1.62
CDH3P22223 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC4.94□□□□□ -1.62
CDH3P22223 AC007738.1-201ENST00000413892 348 ntBASIC4.94□□□□□ -1.62
CDH3P22223 MTND4P24-201ENST00000424002 397 ntBASIC4.94□□□□□ -1.62
CDH3P22223 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.94□□□□□ -1.62
CDH3P22223 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CDH3P22223 AC022022.1-201ENST00000430304 178 ntBASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 163.3 ms