Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC5.82□□□□□ -1.48
ATF4P18848 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
ATF4P18848 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
ATF4P18848 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
ATF4P18848 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
ATF4P18848 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
ATF4P18848 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
ATF4P18848 AC005005.4-201ENST00000623789 16698 ntBASIC5.82□□□□□ -1.48
ATF4P18848 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
ATF4P18848 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
ATF4P18848 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
ATF4P18848 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
ATF4P18848 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.82□□□□□ -1.48
ATF4P18848 EEF1A1P16-201ENST00000325349 1414 ntBASIC5.82□□□□□ -1.48
ATF4P18848 GABRR3-202ENST00000472788 1416 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
ATF4P18848 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
ATF4P18848 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
ATF4P18848 AC020658.2-201ENST00000559030 4020 ntBASIC5.81□□□□□ -1.48
ATF4P18848 AC013488.1-201ENST00000526618 1838 ntBASIC5.81□□□□□ -1.48
ATF4P18848 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
ATF4P18848 GOT2P1-201ENST00000440922 1309 ntBASIC5.81□□□□□ -1.48
ATF4P18848 AC235565.1-201ENST00000456962 1325 ntBASIC5.81□□□□□ -1.48
ATF4P18848 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC5.81□□□□□ -1.48
ATF4P18848 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.81□□□□□ -1.48
ATF4P18848 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.81□□□□□ -1.48
ATF4P18848 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.81□□□□□ -1.48
ATF4P18848 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.81□□□□□ -1.48
ATF4P18848 SAGE4P-201ENST00000442271 3381 ntBASIC5.81□□□□□ -1.48
ATF4P18848 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
ATF4P18848 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
ATF4P18848 RNA5SP427-201ENST00000365323 119 ntBASIC5.81□□□□□ -1.48
ATF4P18848 RN7SKP1-201ENST00000365525 307 ntBASIC5.81□□□□□ -1.48
ATF4P18848 AL139327.1-201ENST00000382988 348 ntBASIC5.81□□□□□ -1.48
ATF4P18848 MIR181A1-201ENST00000385026 110 ntBASIC5.81□□□□□ -1.48
ATF4P18848 HNRNPCP2-201ENST00000399515 881 ntBASIC5.81□□□□□ -1.48
ATF4P18848 BTBD10P2-201ENST00000404779 676 ntBASIC5.81□□□□□ -1.48
ATF4P18848 AL096800.1-201ENST00000405326 893 ntBASIC5.81□□□□□ -1.48
ATF4P18848 FCF1P10-201ENST00000407590 479 ntBASIC5.81□□□□□ -1.48
ATF4P18848 RN7SKP89-201ENST00000410774 242 ntBASIC5.81□□□□□ -1.48
ATF4P18848 GSTA10P-201ENST00000412182 576 ntBASIC5.81□□□□□ -1.48
ATF4P18848 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC5.81□□□□□ -1.48
ATF4P18848 AC011753.4-201ENST00000417974 311 ntBASIC5.81□□□□□ -1.48
ATF4P18848 RPL17P17-201ENST00000419491 557 ntBASIC5.81□□□□□ -1.48
ATF4P18848 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC5.81□□□□□ -1.48
ATF4P18848 GLRXP1-201ENST00000423261 334 ntBASIC5.81□□□□□ -1.48
ATF4P18848 ELOBP4-201ENST00000423418 296 ntBASIC5.81□□□□□ -1.48
ATF4P18848 AC003071.2-201ENST00000423857 315 ntBASIC5.81□□□□□ -1.48
ATF4P18848 GSTA6P-201ENST00000424144 582 ntBASIC5.81□□□□□ -1.48
ATF4P18848 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
ATF4P18848 AC130472.1-201ENST00000427885 309 ntBASIC5.81□□□□□ -1.48
ATF4P18848 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.81□□□□□ -1.48
ATF4P18848 AC239367.3-201ENST00000428996 814 ntBASIC5.81□□□□□ -1.48
ATF4P18848 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC5.81□□□□□ -1.48
ATF4P18848 BX679664.2-201ENST00000439282 283 ntBASIC5.81□□□□□ -1.48
ATF4P18848 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC5.81□□□□□ -1.48
ATF4P18848 PGBD4P3-201ENST00000440731 581 ntBASIC5.81□□□□□ -1.48
ATF4P18848 AL021939.1-201ENST00000441868 886 ntBASIC5.81□□□□□ -1.48
ATF4P18848 MTND6P13-201ENST00000443510 523 ntBASIC5.81□□□□□ -1.48
ATF4P18848 CYCSP51-201ENST00000443545 318 ntBASIC5.81□□□□□ -1.48
ATF4P18848 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC5.81□□□□□ -1.48
ATF4P18848 FO393419.1-201ENST00000443746 355 ntBASIC5.81□□□□□ -1.48
ATF4P18848 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.81□□□□□ -1.48
ATF4P18848 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC5.81□□□□□ -1.48
ATF4P18848 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC5.81□□□□□ -1.48
ATF4P18848 NPM1P9-201ENST00000453156 844 ntBASIC5.81□□□□□ -1.48
ATF4P18848 AC104164.1-201ENST00000460282 590 ntBASIC5.81□□□□□ -1.48
ATF4P18848 AL035660.2-201ENST00000461248 556 ntTSL 2 BASIC5.81□□□□□ -1.48
ATF4P18848 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
ATF4P18848 RN7SL12P-201ENST00000473849 290 ntBASIC5.81□□□□□ -1.48
ATF4P18848 RN7SL201P-201ENST00000482306 296 ntBASIC5.81□□□□□ -1.48
ATF4P18848 RPS10P20-201ENST00000494130 463 ntBASIC5.81□□□□□ -1.48
ATF4P18848 ABHD10-204ENST00000494817 801 ntTSL 3 BASIC5.81□□□□□ -1.48
ATF4P18848 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC5.81□□□□□ -1.48
ATF4P18848 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
ATF4P18848 AC106800.3-201ENST00000511389 308 ntBASIC5.81□□□□□ -1.48
ATF4P18848 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC5.81□□□□□ -1.48
ATF4P18848 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC5.81□□□□□ -1.48
ATF4P18848 RNU6-430P-201ENST00000517078 107 ntBASIC5.81□□□□□ -1.48
ATF4P18848 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
ATF4P18848 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.81□□□□□ -1.48
ATF4P18848 AC060775.1-201ENST00000518241 520 ntBASIC5.81□□□□□ -1.48
ATF4P18848 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC5.81□□□□□ -1.48
ATF4P18848 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC5.81□□□□□ -1.48
ATF4P18848 AL121594.2-201ENST00000541658 472 ntBASIC5.81□□□□□ -1.48
ATF4P18848 RD3L-201ENST00000557640 1201 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
ATF4P18848 AC092332.1-201ENST00000563684 829 ntBASIC5.81□□□□□ -1.48
ATF4P18848 ANP32BP1-202ENST00000568553 737 ntBASIC5.81□□□□□ -1.48
ATF4P18848 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.81□□□□□ -1.48
ATF4P18848 AC133565.1-201ENST00000569218 488 ntTSL 3 BASIC5.81□□□□□ -1.48
ATF4P18848 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.81□□□□□ -1.48
ATF4P18848 AP006587.6-201ENST00000582128 1091 ntBASIC5.81□□□□□ -1.48
ATF4P18848 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.81□□□□□ -1.48
ATF4P18848 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC5.81□□□□□ -1.48
ATF4P18848 ZNF730-201ENST00000593635 464 ntTSL 3 BASIC5.81□□□□□ -1.48
ATF4P18848 AC007566.2-201ENST00000603642 413 ntBASIC5.81□□□□□ -1.48
ATF4P18848 AC022001.1-201ENST00000605193 268 ntBASIC5.81□□□□□ -1.48
ATF4P18848 AC012511.1-201ENST00000608140 449 ntBASIC5.81□□□□□ -1.48
ATF4P18848 MIR6745-201ENST00000612694 127 ntBASIC5.81□□□□□ -1.48
ATF4P18848 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.81□□□□□ -1.48
ATF4P18848 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms