Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC6.91□□□□□ -1.3
BMP3P12645 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
BMP3P12645 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
BMP3P12645 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
BMP3P12645 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.91□□□□□ -1.3
BMP3P12645 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
BMP3P12645 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
BMP3P12645 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.91□□□□□ -1.3
BMP3P12645 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC6.91□□□□□ -1.3
BMP3P12645 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
BMP3P12645 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.9□□□□□ -1.3
BMP3P12645 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
BMP3P12645 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
BMP3P12645 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
BMP3P12645 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
BMP3P12645 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
BMP3P12645 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
BMP3P12645 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
BMP3P12645 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC6.9□□□□□ -1.3
BMP3P12645 RNU6-560P-201ENST00000364007 108 ntBASIC6.9□□□□□ -1.3
BMP3P12645 RNU4-91P-201ENST00000364778 135 ntBASIC6.9□□□□□ -1.3
BMP3P12645 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC6.9□□□□□ -1.3
BMP3P12645 TRAV35-201ENST00000390462 330 ntBASIC6.9□□□□□ -1.3
BMP3P12645 AC087752.1-201ENST00000391360 558 ntBASIC6.9□□□□□ -1.3
BMP3P12645 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.9□□□□□ -1.3
BMP3P12645 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC6.9□□□□□ -1.3
BMP3P12645 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC6.9□□□□□ -1.3
BMP3P12645 CHEK2P5-201ENST00000423877 246 ntBASIC6.9□□□□□ -1.3
BMP3P12645 OR8F1P-201ENST00000425243 930 ntBASIC6.9□□□□□ -1.3
BMP3P12645 RPL21P43-201ENST00000425440 472 ntBASIC6.9□□□□□ -1.3
BMP3P12645 AC099677.3-201ENST00000427081 395 ntBASIC6.9□□□□□ -1.3
BMP3P12645 AC126120.1-201ENST00000431082 470 ntBASIC6.9□□□□□ -1.3
BMP3P12645 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC6.9□□□□□ -1.3
BMP3P12645 USP9YP8-201ENST00000441913 500 ntBASIC6.9□□□□□ -1.3
BMP3P12645 RPL36AP39-201ENST00000445859 318 ntBASIC6.9□□□□□ -1.3
BMP3P12645 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
BMP3P12645 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC6.9□□□□□ -1.3
BMP3P12645 SSXP1-201ENST00000453640 473 ntBASIC6.9□□□□□ -1.3
BMP3P12645 AC018638.3-201ENST00000461273 132 ntBASIC6.9□□□□□ -1.3
BMP3P12645 RN7SL174P-201ENST00000475578 289 ntBASIC6.9□□□□□ -1.3
BMP3P12645 AC091959.2-201ENST00000477363 321 ntBASIC6.9□□□□□ -1.3
BMP3P12645 RPL7P18-201ENST00000478965 734 ntBASIC6.9□□□□□ -1.3
BMP3P12645 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.9□□□□□ -1.3
BMP3P12645 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC6.9□□□□□ -1.3
BMP3P12645 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC6.9□□□□□ -1.3
BMP3P12645 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.9□□□□□ -1.3
BMP3P12645 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC6.9□□□□□ -1.3
BMP3P12645 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC6.9□□□□□ -1.3
BMP3P12645 CYP4F27P-201ENST00000514557 494 ntBASIC6.9□□□□□ -1.3
BMP3P12645 RNU6ATAC39P-201ENST00000516309 149 ntBASIC6.9□□□□□ -1.3
BMP3P12645 SNORA20.3-201ENST00000516880 132 ntBASIC6.9□□□□□ -1.3
BMP3P12645 IGHVIII-38-1-201ENST00000521454 282 ntBASIC6.9□□□□□ -1.3
BMP3P12645 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.9□□□□□ -1.3
BMP3P12645 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.9□□□□□ -1.3
BMP3P12645 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC6.9□□□□□ -1.3
BMP3P12645 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC6.9□□□□□ -1.3
BMP3P12645 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC6.9□□□□□ -1.3
BMP3P12645 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC6.9□□□□□ -1.3
BMP3P12645 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC6.9□□□□□ -1.3
BMP3P12645 AL049840.6-201ENST00000604583 345 ntBASIC6.9□□□□□ -1.3
BMP3P12645 AL354760.1-201ENST00000608357 643 ntBASIC6.9□□□□□ -1.3
BMP3P12645 AL136221.1-201ENST00000621449 509 ntBASIC6.9□□□□□ -1.3
BMP3P12645 AC109454.4-201ENST00000623411 649 ntBASIC6.9□□□□□ -1.3
BMP3P12645 AC010329.1-201ENST00000593903 8328 ntBASIC6.9□□□□□ -1.3
BMP3P12645 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.9□□□□□ -1.31
BMP3P12645 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
BMP3P12645 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.31
BMP3P12645 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
BMP3P12645 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.9□□□□□ -1.31
BMP3P12645 AC079753.1-201ENST00000623243 3868 ntBASIC6.9□□□□□ -1.31
BMP3P12645 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
BMP3P12645 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.89□□□□□ -1.31
BMP3P12645 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
BMP3P12645 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.89□□□□□ -1.31
BMP3P12645 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.89□□□□□ -1.31
BMP3P12645 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.89□□□□□ -1.31
BMP3P12645 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
BMP3P12645 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
BMP3P12645 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
BMP3P12645 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
BMP3P12645 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
BMP3P12645 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
BMP3P12645 MIR375-201ENST00000362103 64 ntBASIC6.89□□□□□ -1.31
BMP3P12645 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
BMP3P12645 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
BMP3P12645 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
BMP3P12645 AL035419.1-201ENST00000397037 564 ntBASIC6.89□□□□□ -1.31
BMP3P12645 AP003170.5-201ENST00000397185 335 ntBASIC6.89□□□□□ -1.31
BMP3P12645 RNU2-65P-201ENST00000410162 185 ntBASIC6.89□□□□□ -1.31
BMP3P12645 RNA5SP178-201ENST00000410380 128 ntBASIC6.89□□□□□ -1.31
BMP3P12645 AC116036.1-201ENST00000412199 367 ntBASIC6.89□□□□□ -1.31
BMP3P12645 RPS4XP5-201ENST00000419038 768 ntBASIC6.89□□□□□ -1.31
BMP3P12645 PAICSP7-201ENST00000419829 962 ntBASIC6.89□□□□□ -1.31
BMP3P12645 OFD1P18Y-201ENST00000420889 959 ntBASIC6.89□□□□□ -1.31
BMP3P12645 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC6.89□□□□□ -1.31
BMP3P12645 KCTD9P3-201ENST00000434597 1169 ntBASIC6.89□□□□□ -1.31
BMP3P12645 AC242426.1-201ENST00000435270 960 ntBASIC6.89□□□□□ -1.31
BMP3P12645 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC6.89□□□□□ -1.31
BMP3P12645 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.89□□□□□ -1.31
BMP3P12645 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms