Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
COL11A1P12107 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
COL11A1P12107 AC104623.2-202ENST00000623477 4002 ntBASIC5.06□□□□□ -1.6
COL11A1P12107 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
COL11A1P12107 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
COL11A1P12107 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
COL11A1P12107 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
COL11A1P12107 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
COL11A1P12107 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
COL11A1P12107 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
COL11A1P12107 RPS26P8-201ENST00000393490 348 ntBASIC5.06□□□□□ -1.6
COL11A1P12107 RPL17P50-201ENST00000396131 546 ntBASIC5.06□□□□□ -1.6
COL11A1P12107 RN7SKP167-201ENST00000411047 285 ntBASIC5.06□□□□□ -1.6
COL11A1P12107 AC009237.10-201ENST00000414112 510 ntBASIC5.06□□□□□ -1.6
COL11A1P12107 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.06□□□□□ -1.6
COL11A1P12107 EIF4A1P1-201ENST00000420241 934 ntBASIC5.06□□□□□ -1.6
COL11A1P12107 RPL34P6-201ENST00000432390 345 ntBASIC5.06□□□□□ -1.6
COL11A1P12107 AC034236.1-201ENST00000469891 373 ntBASIC5.06□□□□□ -1.6
COL11A1P12107 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
COL11A1P12107 ARL6IP1P1-201ENST00000545836 610 ntBASIC5.06□□□□□ -1.6
COL11A1P12107 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC5.06□□□□□ -1.6
COL11A1P12107 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC5.06□□□□□ -1.6
COL11A1P12107 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC5.06□□□□□ -1.6
COL11A1P12107 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
COL11A1P12107 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
COL11A1P12107 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
COL11A1P12107 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
COL11A1P12107 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
COL11A1P12107 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
COL11A1P12107 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
COL11A1P12107 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
COL11A1P12107 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.05□□□□□ -1.6
COL11A1P12107 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
COL11A1P12107 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC5.05□□□□□ -1.6
COL11A1P12107 MIR23B-201ENST00000384832 97 ntBASIC5.05□□□□□ -1.6
COL11A1P12107 MIR23A-201ENST00000385245 73 ntBASIC5.05□□□□□ -1.6
COL11A1P12107 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC5.05□□□□□ -1.6
COL11A1P12107 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
COL11A1P12107 AP002812.1-201ENST00000495378 474 ntBASIC5.05□□□□□ -1.6
COL11A1P12107 RNA5SP249-201ENST00000516127 99 ntBASIC5.05□□□□□ -1.6
COL11A1P12107 RNA5SP303-201ENST00000516192 130 ntBASIC5.05□□□□□ -1.6
COL11A1P12107 MED28P5-201ENST00000528254 438 ntBASIC5.05□□□□□ -1.6
COL11A1P12107 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.05□□□□□ -1.6
COL11A1P12107 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
COL11A1P12107 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.05□□□□□ -1.6
COL11A1P12107 AC090948.2-201ENST00000607363 564 ntBASIC5.05□□□□□ -1.6
COL11A1P12107 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
COL11A1P12107 AC011755.1-201ENST00000623763 2049 ntBASIC5.05□□□□□ -1.6
COL11A1P12107 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
COL11A1P12107 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.05□□□□□ -1.6
COL11A1P12107 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
COL11A1P12107 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
COL11A1P12107 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
COL11A1P12107 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
COL11A1P12107 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
COL11A1P12107 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC5.05□□□□□ -1.6
COL11A1P12107 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
COL11A1P12107 AL050305.1-201ENST00000399993 1230 ntBASIC5.04□□□□□ -1.6
COL11A1P12107 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
COL11A1P12107 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC5.04□□□□□ -1.6
COL11A1P12107 AC004938.1-201ENST00000438468 308 ntBASIC5.04□□□□□ -1.6
COL11A1P12107 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC5.04□□□□□ -1.6
COL11A1P12107 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC5.04□□□□□ -1.6
COL11A1P12107 AC022034.3-201ENST00000471393 478 ntBASIC5.04□□□□□ -1.6
COL11A1P12107 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.04□□□□□ -1.6
COL11A1P12107 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
COL11A1P12107 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.04□□□□□ -1.6
COL11A1P12107 AC020593.1-201ENST00000507399 299 ntBASIC5.04□□□□□ -1.6
COL11A1P12107 AC010476.1-201ENST00000519111 851 ntBASIC5.04□□□□□ -1.6
COL11A1P12107 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
COL11A1P12107 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
COL11A1P12107 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
COL11A1P12107 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.04□□□□□ -1.6
COL11A1P12107 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
COL11A1P12107 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
COL11A1P12107 AC003985.2-201ENST00000562268 1669 ntBASIC5.04□□□□□ -1.6
COL11A1P12107 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.04□□□□□ -1.6
COL11A1P12107 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
COL11A1P12107 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.04□□□□□ -1.6
COL11A1P12107 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
COL11A1P12107 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC5.04□□□□□ -1.6
COL11A1P12107 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
COL11A1P12107 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
COL11A1P12107 HYKK-202ENST00000408962 847 ntTSL 5 BASIC5.04□□□□□ -1.6
COL11A1P12107 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC5.04□□□□□ -1.6
COL11A1P12107 AL356276.2-201ENST00000435919 558 ntBASIC5.04□□□□□ -1.6
COL11A1P12107 TBCAP1-201ENST00000436520 327 ntBASIC5.04□□□□□ -1.6
COL11A1P12107 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.04□□□□□ -1.6
COL11A1P12107 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC5.04□□□□□ -1.6
COL11A1P12107 RN7SL303P-201ENST00000469773 251 ntBASIC5.04□□□□□ -1.6
COL11A1P12107 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC5.04□□□□□ -1.6
COL11A1P12107 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
COL11A1P12107 HYKK-203ENST00000563233 734 ntTSL 2 BASIC5.04□□□□□ -1.6
COL11A1P12107 AC023762.1-201ENST00000603280 584 ntBASIC5.04□□□□□ -1.6
COL11A1P12107 IMMP1LP1-201ENST00000605170 488 ntBASIC5.04□□□□□ -1.6
COL11A1P12107 OR8B1P-202ENST00000641132 1178 ntBASIC5.04□□□□□ -1.6
COL11A1P12107 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC5.04□□□□□ -1.6
COL11A1P12107 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
COL11A1P12107 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
COL11A1P12107 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms