Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC5.38□□□□□ -1.55
RB1P06400 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.38□□□□□ -1.55
RB1P06400 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC5.38□□□□□ -1.55
RB1P06400 AC020910.3-201ENST00000603701 874 ntBASIC5.38□□□□□ -1.55
RB1P06400 AC011626.1-201ENST00000604710 562 ntBASIC5.38□□□□□ -1.55
RB1P06400 AL445493.3-201ENST00000619568 477 ntBASIC5.38□□□□□ -1.55
RB1P06400 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC5.38□□□□□ -1.55
RB1P06400 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
RB1P06400 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RB1P06400 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.38□□□□□ -1.55
RB1P06400 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5.38□□□□□ -1.55
RB1P06400 AL359715.4-201ENST00000606629 1436 ntBASIC5.38□□□□□ -1.55
RB1P06400 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.38□□□□□ -1.55
RB1P06400 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
RB1P06400 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RB1P06400 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RB1P06400 AC006210.2-201ENST00000367074 1545 ntBASIC5.38□□□□□ -1.55
RB1P06400 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RB1P06400 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RB1P06400 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RB1P06400 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
RB1P06400 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.37□□□□□ -1.55
RB1P06400 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.37□□□□□ -1.55
RB1P06400 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
RB1P06400 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
RB1P06400 RAD1P1-201ENST00000231383 813 ntBASIC5.37□□□□□ -1.55
RB1P06400 OR4K15-201ENST00000305051 1216 ntBASIC5.37□□□□□ -1.55
RB1P06400 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RB1P06400 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
RB1P06400 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RB1P06400 AC069213.2-201ENST00000420238 366 ntBASIC5.37□□□□□ -1.55
RB1P06400 AC004074.1-201ENST00000421810 1063 ntBASIC5.37□□□□□ -1.55
RB1P06400 RPS27AP6-201ENST00000427962 448 ntBASIC5.37□□□□□ -1.55
RB1P06400 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC5.37□□□□□ -1.55
RB1P06400 NRBF2P3-201ENST00000432731 865 ntBASIC5.37□□□□□ -1.55
RB1P06400 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC5.37□□□□□ -1.55
RB1P06400 NOP56P2-201ENST00000447491 769 ntBASIC5.37□□□□□ -1.55
RB1P06400 TCEA1P1-201ENST00000449716 880 ntBASIC5.37□□□□□ -1.55
RB1P06400 AURKAPS2-201ENST00000454983 333 ntBASIC5.37□□□□□ -1.55
RB1P06400 AK3P4-201ENST00000504283 583 ntBASIC5.37□□□□□ -1.55
RB1P06400 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RB1P06400 AC111000.3-201ENST00000508057 576 ntBASIC5.37□□□□□ -1.55
RB1P06400 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.37□□□□□ -1.55
RB1P06400 HMGN1P9-201ENST00000515212 298 ntBASIC5.37□□□□□ -1.55
RB1P06400 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RB1P06400 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC5.37□□□□□ -1.55
RB1P06400 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC5.37□□□□□ -1.55
RB1P06400 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.37□□□□□ -1.55
RB1P06400 AC004923.2-201ENST00000529649 369 ntBASIC5.37□□□□□ -1.55
RB1P06400 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.37□□□□□ -1.55
RB1P06400 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
RB1P06400 AC093014.1-201ENST00000548926 724 ntBASIC5.37□□□□□ -1.55
RB1P06400 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
RB1P06400 ATP5J2P6-201ENST00000565203 266 ntBASIC5.37□□□□□ -1.55
RB1P06400 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC5.37□□□□□ -1.55
RB1P06400 TVP23CP2-201ENST00000571473 623 ntBASIC5.37□□□□□ -1.55
RB1P06400 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC5.37□□□□□ -1.55
RB1P06400 MIR7853-201ENST00000584820 132 ntBASIC5.37□□□□□ -1.55
RB1P06400 ZNF92P2-201ENST00000600543 1059 ntBASIC5.37□□□□□ -1.55
RB1P06400 AL158211.2-201ENST00000607282 395 ntBASIC5.37□□□□□ -1.55
RB1P06400 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.37□□□□□ -1.55
RB1P06400 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC5.37□□□□□ -1.55
RB1P06400 AC007786.3-201ENST00000615154 596 ntBASIC5.37□□□□□ -1.55
RB1P06400 CR381572.2-201ENST00000624852 397 ntBASIC5.37□□□□□ -1.55
RB1P06400 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
RB1P06400 Z98755.1-201ENST00000407015 1384 ntBASIC5.37□□□□□ -1.55
RB1P06400 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.37□□□□□ -1.55
RB1P06400 RBPJP2-201ENST00000618187 1444 ntBASIC5.37□□□□□ -1.55
RB1P06400 VPS35P1-201ENST00000563400 1518 ntBASIC5.37□□□□□ -1.55
RB1P06400 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.37□□□□□ -1.55
RB1P06400 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.36□□□□□ -1.55
RB1P06400 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.36□□□□□ -1.55
RB1P06400 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RB1P06400 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RB1P06400 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
RB1P06400 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
RB1P06400 OR9G4-201ENST00000302957 984 ntBASIC5.36□□□□□ -1.55
RB1P06400 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RB1P06400 RNA5SP296-201ENST00000410523 111 ntBASIC5.36□□□□□ -1.55
RB1P06400 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.36□□□□□ -1.55
RB1P06400 AC093414.1-201ENST00000434712 514 ntBASIC5.36□□□□□ -1.55
RB1P06400 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.36□□□□□ -1.55
RB1P06400 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.36□□□□□ -1.55
RB1P06400 AC021205.1-201ENST00000468797 348 ntBASIC5.36□□□□□ -1.55
RB1P06400 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.36□□□□□ -1.55
RB1P06400 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC5.36□□□□□ -1.55
RB1P06400 CDH12P2-201ENST00000504393 298 ntBASIC5.36□□□□□ -1.55
RB1P06400 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC5.36□□□□□ -1.55
RB1P06400 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RB1P06400 SEPT10P1-201ENST00000517342 1162 ntBASIC5.36□□□□□ -1.55
RB1P06400 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.36□□□□□ -1.55
RB1P06400 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC5.36□□□□□ -1.55
RB1P06400 MORF4L1P3-201ENST00000525966 950 ntBASIC5.36□□□□□ -1.55
RB1P06400 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC5.36□□□□□ -1.55
RB1P06400 CASP1-216ENST00000534497 825 ntTSL 5 BASIC5.36□□□□□ -1.55
RB1P06400 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.36□□□□□ -1.55
RB1P06400 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC5.36□□□□□ -1.55
RB1P06400 AC084759.1-201ENST00000561168 290 ntBASIC5.36□□□□□ -1.55
RB1P06400 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.36□□□□□ -1.55
RB1P06400 AC074050.1-201ENST00000563247 211 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 12 ms