Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC6.03□□□□□ -1.44
HLA-DOAP06340 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC6.03□□□□□ -1.44
HLA-DOAP06340 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC6.03□□□□□ -1.44
HLA-DOAP06340 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC6.03□□□□□ -1.44
HLA-DOAP06340 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC6.03□□□□□ -1.44
HLA-DOAP06340 ZNF92P3-201ENST00000596594 954 ntBASIC6.03□□□□□ -1.44
HLA-DOAP06340 MTCO3P22-201ENST00000603219 784 ntBASIC6.03□□□□□ -1.44
HLA-DOAP06340 AC012557.2-201ENST00000605919 418 ntBASIC6.03□□□□□ -1.44
HLA-DOAP06340 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC6.03□□□□□ -1.44
HLA-DOAP06340 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HLA-DOAP06340 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC6.03□□□□□ -1.44
HLA-DOAP06340 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HLA-DOAP06340 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HLA-DOAP06340 IRF5P1-201ENST00000504852 2164 ntBASIC6.03□□□□□ -1.44
HLA-DOAP06340 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC6.02□□□□□ -1.44
HLA-DOAP06340 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.44
HLA-DOAP06340 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HLA-DOAP06340 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.02□□□□□ -1.45
HLA-DOAP06340 AC016745.2-201ENST00000608834 3443 ntBASIC6.02□□□□□ -1.45
HLA-DOAP06340 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC6.02□□□□□ -1.45
HLA-DOAP06340 AC007159.1-201ENST00000566529 4706 ntBASIC6.02□□□□□ -1.45
HLA-DOAP06340 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
HLA-DOAP06340 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
HLA-DOAP06340 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.02□□□□□ -1.45
HLA-DOAP06340 AL022393.1-201ENST00000625142 1677 ntBASIC6.02□□□□□ -1.45
HLA-DOAP06340 RNA5SP443-201ENST00000363083 132 ntBASIC6.02□□□□□ -1.45
HLA-DOAP06340 RNU6-481P-201ENST00000384194 107 ntBASIC6.02□□□□□ -1.45
HLA-DOAP06340 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
HLA-DOAP06340 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HLA-DOAP06340 AL021331.1-201ENST00000402817 582 ntBASIC6.02□□□□□ -1.45
HLA-DOAP06340 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
HLA-DOAP06340 AL445183.3-201ENST00000414168 502 ntBASIC6.02□□□□□ -1.45
HLA-DOAP06340 MTCO3P4-201ENST00000419236 787 ntBASIC6.02□□□□□ -1.45
HLA-DOAP06340 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC6.02□□□□□ -1.45
HLA-DOAP06340 AC007563.3-201ENST00000433233 371 ntBASIC6.02□□□□□ -1.45
HLA-DOAP06340 AC092447.2-201ENST00000435487 669 ntBASIC6.02□□□□□ -1.45
HLA-DOAP06340 THAP5P1-201ENST00000439089 262 ntBASIC6.02□□□□□ -1.45
HLA-DOAP06340 CDY12P-201ENST00000440679 1015 ntBASIC6.02□□□□□ -1.45
HLA-DOAP06340 AC112498.1-201ENST00000444401 332 ntBASIC6.02□□□□□ -1.45
HLA-DOAP06340 CDY13P-201ENST00000445813 1015 ntBASIC6.02□□□□□ -1.45
HLA-DOAP06340 AC090804.1-201ENST00000448870 490 ntBASIC6.02□□□□□ -1.45
HLA-DOAP06340 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC6.02□□□□□ -1.45
HLA-DOAP06340 CYCSP20-201ENST00000473154 315 ntBASIC6.02□□□□□ -1.45
HLA-DOAP06340 STRADBP1-201ENST00000478954 1281 ntBASIC6.02□□□□□ -1.45
HLA-DOAP06340 RN7SL591P-201ENST00000496150 292 ntBASIC6.02□□□□□ -1.45
HLA-DOAP06340 AC021087.2-201ENST00000504656 1203 ntBASIC6.02□□□□□ -1.45
HLA-DOAP06340 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
HLA-DOAP06340 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC6.02□□□□□ -1.45
HLA-DOAP06340 BTF3P13-201ENST00000513224 490 ntBASIC6.02□□□□□ -1.45
HLA-DOAP06340 Y_RNA.688-201ENST00000516565 95 ntBASIC6.02□□□□□ -1.45
HLA-DOAP06340 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC6.02□□□□□ -1.45
HLA-DOAP06340 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC6.02□□□□□ -1.45
HLA-DOAP06340 OR10V3P-201ENST00000525712 725 ntBASIC6.02□□□□□ -1.45
HLA-DOAP06340 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC6.02□□□□□ -1.45
HLA-DOAP06340 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
HLA-DOAP06340 AL442163.2-201ENST00000553912 710 ntBASIC6.02□□□□□ -1.45
HLA-DOAP06340 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC6.02□□□□□ -1.45
HLA-DOAP06340 AC009117.1-201ENST00000563948 554 ntBASIC6.02□□□□□ -1.45
HLA-DOAP06340 MTND3P13-201ENST00000574391 343 ntBASIC6.02□□□□□ -1.45
HLA-DOAP06340 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC6.02□□□□□ -1.45
HLA-DOAP06340 SNX6P1-201ENST00000601728 1224 ntBASIC6.02□□□□□ -1.45
HLA-DOAP06340 AC099785.1-201ENST00000605697 437 ntBASIC6.02□□□□□ -1.45
HLA-DOAP06340 AC015849.2-201ENST00000605738 409 ntBASIC6.02□□□□□ -1.45
HLA-DOAP06340 AC078883.4-201ENST00000623218 367 ntBASIC6.02□□□□□ -1.45
HLA-DOAP06340 AC090617.9-201ENST00000623751 147 ntBASIC6.02□□□□□ -1.45
HLA-DOAP06340 METTL8-218ENST00000638989 876 ntTSL 5 BASIC6.02□□□□□ -1.45
HLA-DOAP06340 METTL8-219ENST00000640734 726 ntTSL 2 BASIC6.02□□□□□ -1.45
HLA-DOAP06340 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC6.02□□□□□ -1.45
HLA-DOAP06340 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC6.02□□□□□ -1.45
HLA-DOAP06340 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
HLA-DOAP06340 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HLA-DOAP06340 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC6.02□□□□□ -1.45
HLA-DOAP06340 BX284613.1-201ENST00000452221 1641 ntBASIC6.02□□□□□ -1.45
HLA-DOAP06340 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.02□□□□□ -1.45
HLA-DOAP06340 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HLA-DOAP06340 AL390862.1-201ENST00000635467 1469 ntBASIC6.02□□□□□ -1.45
HLA-DOAP06340 HSPA8P14-201ENST00000552265 1805 ntBASIC6.02□□□□□ -1.45
HLA-DOAP06340 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
HLA-DOAP06340 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
HLA-DOAP06340 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
HLA-DOAP06340 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
HLA-DOAP06340 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
HLA-DOAP06340 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
HLA-DOAP06340 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC6.01□□□□□ -1.45
HLA-DOAP06340 MAPK10-263ENST00000641052 4307 ntBASIC6.01□□□□□ -1.45
HLA-DOAP06340 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
HLA-DOAP06340 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
HLA-DOAP06340 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
HLA-DOAP06340 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
HLA-DOAP06340 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC6.01□□□□□ -1.45
HLA-DOAP06340 OR1L6-202ENST00000373684 1044 ntBASIC6.01□□□□□ -1.45
HLA-DOAP06340 SNORA2.3-201ENST00000383920 135 ntBASIC6.01□□□□□ -1.45
HLA-DOAP06340 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
HLA-DOAP06340 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
HLA-DOAP06340 AL390316.1-201ENST00000406279 553 ntBASIC6.01□□□□□ -1.45
HLA-DOAP06340 RN7SKP97-201ENST00000410966 333 ntBASIC6.01□□□□□ -1.45
HLA-DOAP06340 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC6.01□□□□□ -1.45
HLA-DOAP06340 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC6.01□□□□□ -1.45
HLA-DOAP06340 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC6.01□□□□□ -1.45
HLA-DOAP06340 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms