Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 AC104623.2-202ENST00000623477 4002 ntBASIC5.13□□□□□ -1.59
VTNP04004 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VTNP04004 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
VTNP04004 OR14L1P-202ENST00000641545 3009 ntBASIC5.13□□□□□ -1.59
VTNP04004 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
VTNP04004 MTCO1P15-201ENST00000529569 1526 ntBASIC5.13□□□□□ -1.59
VTNP04004 AC120338.1-201ENST00000625074 1541 ntBASIC5.13□□□□□ -1.59
VTNP04004 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
VTNP04004 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
VTNP04004 AC108467.2-201ENST00000617640 1597 ntBASIC5.13□□□□□ -1.59
VTNP04004 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.13□□□□□ -1.59
VTNP04004 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
VTNP04004 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.13□□□□□ -1.59
VTNP04004 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VTNP04004 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
VTNP04004 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
VTNP04004 ELOCP19-201ENST00000411919 318 ntBASIC5.13□□□□□ -1.59
VTNP04004 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.13□□□□□ -1.59
VTNP04004 VN1R37P-201ENST00000419096 748 ntBASIC5.13□□□□□ -1.59
VTNP04004 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.13□□□□□ -1.59
VTNP04004 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC5.13□□□□□ -1.59
VTNP04004 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.13□□□□□ -1.59
VTNP04004 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.13□□□□□ -1.59
VTNP04004 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.13□□□□□ -1.59
VTNP04004 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.13□□□□□ -1.59
VTNP04004 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.13□□□□□ -1.59
VTNP04004 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.13□□□□□ -1.59
VTNP04004 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.13□□□□□ -1.59
VTNP04004 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.13□□□□□ -1.59
VTNP04004 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC5.13□□□□□ -1.59
VTNP04004 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5.13□□□□□ -1.59
VTNP04004 AC084783.1-201ENST00000565846 910 ntBASIC5.13□□□□□ -1.59
VTNP04004 CYCSP40-201ENST00000575927 294 ntBASIC5.13□□□□□ -1.59
VTNP04004 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC5.13□□□□□ -1.59
VTNP04004 AC010503.3-201ENST00000594355 540 ntBASIC5.13□□□□□ -1.59
VTNP04004 AL445423.1-201ENST00000609941 536 ntBASIC5.13□□□□□ -1.59
VTNP04004 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
VTNP04004 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VTNP04004 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.13□□□□□ -1.59
VTNP04004 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.13□□□□□ -1.59
VTNP04004 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
VTNP04004 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
VTNP04004 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VTNP04004 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
VTNP04004 AC073136.1-201ENST00000449426 2884 ntBASIC5.12□□□□□ -1.59
VTNP04004 AC100778.3-201ENST00000580060 1750 ntBASIC5.12□□□□□ -1.59
VTNP04004 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.12□□□□□ -1.59
VTNP04004 ZFRP1-201ENST00000457579 2970 ntBASIC5.12□□□□□ -1.59
VTNP04004 AC021146.4-201ENST00000309229 279 ntBASIC5.12□□□□□ -1.59
VTNP04004 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
VTNP04004 MIR659-201ENST00000384963 97 ntBASIC5.12□□□□□ -1.59
VTNP04004 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.12□□□□□ -1.59
VTNP04004 USP9YP19-201ENST00000412165 485 ntBASIC5.12□□□□□ -1.59
VTNP04004 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.12□□□□□ -1.59
VTNP04004 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC5.12□□□□□ -1.59
VTNP04004 RPL7P57-201ENST00000423238 740 ntBASIC5.12□□□□□ -1.59
VTNP04004 MTATP6P11-201ENST00000428071 670 ntBASIC5.12□□□□□ -1.59
VTNP04004 EIF2S2P3-201ENST00000428356 999 ntBASIC5.12□□□□□ -1.59
VTNP04004 RPL12P28-201ENST00000430852 489 ntBASIC5.12□□□□□ -1.59
VTNP04004 AC073143.1-201ENST00000436316 395 ntBASIC5.12□□□□□ -1.59
VTNP04004 RPL21P133-201ENST00000443666 476 ntBASIC5.12□□□□□ -1.59
VTNP04004 AL162591.2-201ENST00000449634 317 ntBASIC5.12□□□□□ -1.59
VTNP04004 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.12□□□□□ -1.59
VTNP04004 RN7SL385P-201ENST00000468873 276 ntBASIC5.12□□□□□ -1.59
VTNP04004 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.12□□□□□ -1.59
VTNP04004 AC090686.1-201ENST00000481577 749 ntBASIC5.12□□□□□ -1.59
VTNP04004 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.12□□□□□ -1.59
VTNP04004 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.12□□□□□ -1.59
VTNP04004 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC5.12□□□□□ -1.59
VTNP04004 AL359219.2-201ENST00000555184 348 ntBASIC5.12□□□□□ -1.59
VTNP04004 AC068831.4-201ENST00000556118 109 ntBASIC5.12□□□□□ -1.59
VTNP04004 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.12□□□□□ -1.59
VTNP04004 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC5.12□□□□□ -1.59
VTNP04004 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.12□□□□□ -1.59
VTNP04004 AC008782.1-201ENST00000603386 430 ntBASIC5.12□□□□□ -1.59
VTNP04004 AC008833.1-201ENST00000611633 691 ntBASIC5.12□□□□□ -1.59
VTNP04004 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
VTNP04004 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.12□□□□□ -1.59
VTNP04004 AC108751.5-201ENST00000492880 1336 ntBASIC5.12□□□□□ -1.59
VTNP04004 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
VTNP04004 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
VTNP04004 RAD17P1-201ENST00000418130 2042 ntBASIC5.12□□□□□ -1.59
VTNP04004 AC092376.2-201ENST00000622621 4116 ntBASIC5.12□□□□□ -1.59
VTNP04004 AL121950.1-201ENST00000624993 2077 ntBASIC5.12□□□□□ -1.59
VTNP04004 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
VTNP04004 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.12□□□□□ -1.59
VTNP04004 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
VTNP04004 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
VTNP04004 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.12□□□□□ -1.59
VTNP04004 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
VTNP04004 AC010266.2-201ENST00000564741 3255 ntBASIC5.12□□□□□ -1.59
VTNP04004 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
VTNP04004 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VTNP04004 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.11□□□□□ -1.59
VTNP04004 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VTNP04004 AL031595.2-201ENST00000624215 19071 ntBASIC5.11□□□□□ -1.59
VTNP04004 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
VTNP04004 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
VTNP04004 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
VTNP04004 U3.35-201ENST00000408405 208 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms