Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AC093591.2-201ENST00000565254 3843 ntBASIC4.99□□□□□ -1.61
LDLRP01130 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
LDLRP01130 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
LDLRP01130 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
LDLRP01130 AC011493.1-201ENST00000596753 1632 ntBASIC4.98□□□□□ -1.61
LDLRP01130 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
LDLRP01130 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.98□□□□□ -1.61
LDLRP01130 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC4.98□□□□□ -1.61
LDLRP01130 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
LDLRP01130 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
LDLRP01130 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
LDLRP01130 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.98□□□□□ -1.61
LDLRP01130 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
LDLRP01130 GCNT6-201ENST00000379591 934 ntBASIC4.98□□□□□ -1.61
LDLRP01130 RNA5SP339-201ENST00000390987 122 ntBASIC4.98□□□□□ -1.61
LDLRP01130 CYB5AP4-201ENST00000396692 399 ntBASIC4.98□□□□□ -1.61
LDLRP01130 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.98□□□□□ -1.61
LDLRP01130 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.98□□□□□ -1.61
LDLRP01130 OR2AH1P-201ENST00000425717 928 ntBASIC4.98□□□□□ -1.61
LDLRP01130 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.98□□□□□ -1.61
LDLRP01130 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC4.98□□□□□ -1.61
LDLRP01130 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.98□□□□□ -1.61
LDLRP01130 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.98□□□□□ -1.61
LDLRP01130 MTND1P26-201ENST00000440488 538 ntBASIC4.98□□□□□ -1.61
LDLRP01130 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC4.98□□□□□ -1.61
LDLRP01130 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC4.98□□□□□ -1.61
LDLRP01130 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC4.98□□□□□ -1.61
LDLRP01130 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.98□□□□□ -1.61
LDLRP01130 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC4.98□□□□□ -1.61
LDLRP01130 BLZF2P-201ENST00000553776 1130 ntBASIC4.98□□□□□ -1.61
LDLRP01130 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.98□□□□□ -1.61
LDLRP01130 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC4.98□□□□□ -1.61
LDLRP01130 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
LDLRP01130 DNAJC19P3-201ENST00000594491 331 ntBASIC4.98□□□□□ -1.61
LDLRP01130 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC4.98□□□□□ -1.61
LDLRP01130 AL139022.2-201ENST00000606934 443 ntBASIC4.98□□□□□ -1.61
LDLRP01130 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.98□□□□□ -1.61
LDLRP01130 AC110792.4-201ENST00000609843 298 ntBASIC4.98□□□□□ -1.61
LDLRP01130 AC097520.1-201ENST00000624435 385 ntBASIC4.98□□□□□ -1.61
LDLRP01130 TMEM30CP-203ENST00000637814 1035 ntBASIC4.98□□□□□ -1.61
LDLRP01130 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.98□□□□□ -1.61
LDLRP01130 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC4.98□□□□□ -1.61
LDLRP01130 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.98□□□□□ -1.61
LDLRP01130 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
LDLRP01130 AC011447.7-201ENST00000624228 1590 ntBASIC4.98□□□□□ -1.61
LDLRP01130 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.98□□□□□ -1.61
LDLRP01130 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
LDLRP01130 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
LDLRP01130 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
LDLRP01130 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
LDLRP01130 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
LDLRP01130 AC104260.2-201ENST00000623551 3497 ntBASIC4.98□□□□□ -1.61
LDLRP01130 AC063976.2-201ENST00000425667 3556 ntBASIC4.98□□□□□ -1.61
LDLRP01130 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
LDLRP01130 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
LDLRP01130 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
LDLRP01130 PCAT14-202ENST00000627127 3935 ntBASIC4.97□□□□□ -1.61
LDLRP01130 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
LDLRP01130 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
LDLRP01130 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
LDLRP01130 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
LDLRP01130 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
LDLRP01130 SNORA63.3-201ENST00000362682 132 ntBASIC4.97□□□□□ -1.61
LDLRP01130 SNORA67-201ENST00000384423 137 ntBASIC4.97□□□□□ -1.61
LDLRP01130 AL356967.1-201ENST00000406305 431 ntBASIC4.97□□□□□ -1.61
LDLRP01130 AL355143.1-201ENST00000407101 841 ntBASIC4.97□□□□□ -1.61
LDLRP01130 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.97□□□□□ -1.61
LDLRP01130 RPL26P37-201ENST00000411983 438 ntBASIC4.97□□□□□ -1.61
LDLRP01130 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.97□□□□□ -1.61
LDLRP01130 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC4.97□□□□□ -1.61
LDLRP01130 MTCYBP29-201ENST00000436327 1006 ntBASIC4.97□□□□□ -1.61
LDLRP01130 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.97□□□□□ -1.61
LDLRP01130 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.97□□□□□ -1.61
LDLRP01130 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.97□□□□□ -1.61
LDLRP01130 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC4.97□□□□□ -1.61
LDLRP01130 RN7SL346P-201ENST00000491561 294 ntBASIC4.97□□□□□ -1.61
LDLRP01130 HMGB3P16-201ENST00000508037 287 ntBASIC4.97□□□□□ -1.61
LDLRP01130 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.97□□□□□ -1.61
LDLRP01130 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC4.97□□□□□ -1.61
LDLRP01130 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.97□□□□□ -1.61
LDLRP01130 BRD9P1-201ENST00000529855 560 ntBASIC4.97□□□□□ -1.61
LDLRP01130 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.97□□□□□ -1.61
LDLRP01130 AC137768.1-201ENST00000549998 553 ntBASIC4.97□□□□□ -1.61
LDLRP01130 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC4.97□□□□□ -1.61
LDLRP01130 PCNPP1-201ENST00000552501 511 ntBASIC4.97□□□□□ -1.61
LDLRP01130 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.97□□□□□ -1.61
LDLRP01130 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC4.97□□□□□ -1.61
LDLRP01130 AC079075.1-201ENST00000559543 878 ntBASIC4.97□□□□□ -1.61
LDLRP01130 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.97□□□□□ -1.61
LDLRP01130 MIR3934-201ENST00000579806 107 ntBASIC4.97□□□□□ -1.61
LDLRP01130 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC4.97□□□□□ -1.61
LDLRP01130 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.97□□□□□ -1.61
LDLRP01130 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC4.97□□□□□ -1.61
LDLRP01130 AC026979.4-201ENST00000606555 645 ntBASIC4.97□□□□□ -1.61
LDLRP01130 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.97□□□□□ -1.61
LDLRP01130 AC015914.2-201ENST00000618167 288 ntBASIC4.97□□□□□ -1.61
LDLRP01130 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.97□□□□□ -1.61
LDLRP01130 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.97□□□□□ -1.61
LDLRP01130 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
LDLRP01130 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 327.4 ms