Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
ZIC3O60481 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
ZIC3O60481 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
ZIC3O60481 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
ZIC3O60481 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
ZIC3O60481 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
ZIC3O60481 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.72□□□□□ -1.65
ZIC3O60481 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
ZIC3O60481 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
ZIC3O60481 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC4.72□□□□□ -1.65
ZIC3O60481 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
ZIC3O60481 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
ZIC3O60481 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC4.72□□□□□ -1.65
ZIC3O60481 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.72□□□□□ -1.65
ZIC3O60481 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
ZIC3O60481 MIR105-2-201ENST00000385083 81 ntBASIC4.72□□□□□ -1.65
ZIC3O60481 MIR589-201ENST00000385238 99 ntBASIC4.72□□□□□ -1.65
ZIC3O60481 MIR765-201ENST00000390226 114 ntBASIC4.72□□□□□ -1.65
ZIC3O60481 SNORA48.4-201ENST00000391089 134 ntBASIC4.72□□□□□ -1.65
ZIC3O60481 RPL23AP59-201ENST00000399415 461 ntBASIC4.72□□□□□ -1.65
ZIC3O60481 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.72□□□□□ -1.65
ZIC3O60481 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.72□□□□□ -1.65
ZIC3O60481 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
ZIC3O60481 RNA5SP498-201ENST00000411342 120 ntBASIC4.72□□□□□ -1.65
ZIC3O60481 GPS2P1-201ENST00000411761 986 ntBASIC4.72□□□□□ -1.65
ZIC3O60481 TRIM60P5Y-201ENST00000413946 574 ntBASIC4.72□□□□□ -1.65
ZIC3O60481 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.72□□□□□ -1.65
ZIC3O60481 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC4.72□□□□□ -1.65
ZIC3O60481 XKRYP1-201ENST00000423438 492 ntBASIC4.72□□□□□ -1.65
ZIC3O60481 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.72□□□□□ -1.65
ZIC3O60481 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.72□□□□□ -1.65
ZIC3O60481 XKRYP2-201ENST00000432915 492 ntBASIC4.72□□□□□ -1.65
ZIC3O60481 RPL19P16-201ENST00000433839 588 ntBASIC4.72□□□□□ -1.65
ZIC3O60481 USP9YP24-201ENST00000434374 697 ntBASIC4.72□□□□□ -1.65
ZIC3O60481 AL161722.2-201ENST00000434731 981 ntBASIC4.72□□□□□ -1.65
ZIC3O60481 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.72□□□□□ -1.65
ZIC3O60481 RPS29P10-201ENST00000439197 166 ntBASIC4.72□□□□□ -1.65
ZIC3O60481 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.72□□□□□ -1.65
ZIC3O60481 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC4.72□□□□□ -1.65
ZIC3O60481 USP9YP17-201ENST00000444617 696 ntBASIC4.72□□□□□ -1.65
ZIC3O60481 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.72□□□□□ -1.65
ZIC3O60481 OR51B8P-201ENST00000449892 769 ntBASIC4.72□□□□□ -1.65
ZIC3O60481 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC4.72□□□□□ -1.65
ZIC3O60481 RN7SL515P-201ENST00000463999 297 ntBASIC4.72□□□□□ -1.65
ZIC3O60481 AC107015.1-201ENST00000466902 747 ntBASIC4.72□□□□□ -1.65
ZIC3O60481 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
ZIC3O60481 AC134050.1-201ENST00000495088 933 ntBASIC4.72□□□□□ -1.65
ZIC3O60481 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.72□□□□□ -1.65
ZIC3O60481 PRELID3BP5-201ENST00000508612 460 ntBASIC4.72□□□□□ -1.65
ZIC3O60481 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC4.72□□□□□ -1.65
ZIC3O60481 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC4.72□□□□□ -1.65
ZIC3O60481 ATG10-208ENST00000513634 618 ntTSL 2 BASIC4.72□□□□□ -1.65
ZIC3O60481 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.72□□□□□ -1.65
ZIC3O60481 RNA5SP303-201ENST00000516192 130 ntBASIC4.72□□□□□ -1.65
ZIC3O60481 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC4.72□□□□□ -1.65
ZIC3O60481 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.72□□□□□ -1.65
ZIC3O60481 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.72□□□□□ -1.65
ZIC3O60481 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC4.72□□□□□ -1.65
ZIC3O60481 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.72□□□□□ -1.65
ZIC3O60481 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.72□□□□□ -1.65
ZIC3O60481 AL121612.2-201ENST00000612261 482 ntBASIC4.72□□□□□ -1.65
ZIC3O60481 PART1_2.1-201ENST00000612397 250 ntBASIC4.72□□□□□ -1.65
ZIC3O60481 AC006386.1-201ENST00000619436 415 ntBASIC4.72□□□□□ -1.65
ZIC3O60481 AC018445.2-201ENST00000622987 260 ntBASIC4.72□□□□□ -1.65
ZIC3O60481 LINC01739-205ENST00000641890 573 ntBASIC4.72□□□□□ -1.65
ZIC3O60481 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC4.72□□□□□ -1.65
ZIC3O60481 CCT8P1-201ENST00000413611 1657 ntBASIC4.72□□□□□ -1.65
ZIC3O60481 AC023421.1-201ENST00000590535 1785 ntBASIC4.72□□□□□ -1.65
ZIC3O60481 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
ZIC3O60481 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
ZIC3O60481 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.72□□□□□ -1.65
ZIC3O60481 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
ZIC3O60481 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC4.72□□□□□ -1.65
ZIC3O60481 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
ZIC3O60481 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
ZIC3O60481 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.72□□□□□ -1.65
ZIC3O60481 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
ZIC3O60481 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC4.72□□□□□ -1.65
ZIC3O60481 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC4.72□□□□□ -1.65
ZIC3O60481 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC4.72□□□□□ -1.65
ZIC3O60481 AL355578.1-201ENST00000607405 1328 ntBASIC4.72□□□□□ -1.65
ZIC3O60481 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.71□□□□□ -1.65
ZIC3O60481 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
ZIC3O60481 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC4.71□□□□□ -1.65
ZIC3O60481 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC4.71□□□□□ -1.65
ZIC3O60481 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.65
ZIC3O60481 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
ZIC3O60481 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.66
ZIC3O60481 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
ZIC3O60481 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
ZIC3O60481 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
ZIC3O60481 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
ZIC3O60481 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
ZIC3O60481 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
ZIC3O60481 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
ZIC3O60481 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
ZIC3O60481 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
ZIC3O60481 OR1L6-202ENST00000373684 1044 ntBASIC4.71□□□□□ -1.66
ZIC3O60481 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
ZIC3O60481 RNU1-74P-201ENST00000384108 171 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms