Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.65□□□□□ -1.66
PRKNO60260 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.65□□□□□ -1.66
PRKNO60260 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.65□□□□□ -1.66
PRKNO60260 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
PRKNO60260 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
PRKNO60260 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
PRKNO60260 AC006484.1-201ENST00000435086 1884 ntBASIC4.65□□□□□ -1.66
PRKNO60260 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.65□□□□□ -1.66
PRKNO60260 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
PRKNO60260 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
PRKNO60260 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
PRKNO60260 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
PRKNO60260 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
PRKNO60260 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
PRKNO60260 RPL26P37-201ENST00000411983 438 ntBASIC4.65□□□□□ -1.67
PRKNO60260 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.65□□□□□ -1.67
PRKNO60260 BTF3P9-201ENST00000418784 283 ntBASIC4.65□□□□□ -1.67
PRKNO60260 PTP4A1P1-201ENST00000420539 515 ntBASIC4.65□□□□□ -1.67
PRKNO60260 AC006994.1-201ENST00000438212 839 ntBASIC4.65□□□□□ -1.67
PRKNO60260 OR7E125P-201ENST00000443450 846 ntBASIC4.65□□□□□ -1.67
PRKNO60260 AL691482.1-201ENST00000453255 87 ntBASIC4.65□□□□□ -1.67
PRKNO60260 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.65□□□□□ -1.67
PRKNO60260 HMGB1P4-201ENST00000455362 567 ntBASIC4.65□□□□□ -1.67
PRKNO60260 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC4.65□□□□□ -1.67
PRKNO60260 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.65□□□□□ -1.67
PRKNO60260 LARP7P4-201ENST00000481075 878 ntBASIC4.65□□□□□ -1.67
PRKNO60260 RN7SL591P-201ENST00000496150 292 ntBASIC4.65□□□□□ -1.67
PRKNO60260 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.65□□□□□ -1.67
PRKNO60260 AC140172.1-201ENST00000502928 141 ntBASIC4.65□□□□□ -1.67
PRKNO60260 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.65□□□□□ -1.67
PRKNO60260 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.65□□□□□ -1.67
PRKNO60260 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.65□□□□□ -1.67
PRKNO60260 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.65□□□□□ -1.67
PRKNO60260 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.65□□□□□ -1.67
PRKNO60260 GCSHP4-201ENST00000538792 439 ntBASIC4.65□□□□□ -1.67
PRKNO60260 AC008033.2-201ENST00000542626 177 ntBASIC4.65□□□□□ -1.67
PRKNO60260 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC4.65□□□□□ -1.67
PRKNO60260 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.65□□□□□ -1.67
PRKNO60260 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.65□□□□□ -1.67
PRKNO60260 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.65□□□□□ -1.67
PRKNO60260 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.65□□□□□ -1.67
PRKNO60260 MTCO2P22-201ENST00000603246 681 ntBASIC4.65□□□□□ -1.67
PRKNO60260 AC087783.2-201ENST00000605070 562 ntBASIC4.65□□□□□ -1.67
PRKNO60260 AC112503.1-201ENST00000608436 391 ntBASIC4.65□□□□□ -1.67
PRKNO60260 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC4.65□□□□□ -1.67
PRKNO60260 AC078880.5-201ENST00000617845 421 ntBASIC4.65□□□□□ -1.67
PRKNO60260 AC084824.4-201ENST00000620106 731 ntBASIC4.65□□□□□ -1.67
PRKNO60260 MIR6730-201ENST00000622213 67 ntBASIC4.65□□□□□ -1.67
PRKNO60260 AC112694.2-201ENST00000623697 768 ntBASIC4.65□□□□□ -1.67
PRKNO60260 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC4.65□□□□□ -1.67
PRKNO60260 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.67
PRKNO60260 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.65□□□□□ -1.67
PRKNO60260 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.65□□□□□ -1.67
PRKNO60260 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.65□□□□□ -1.67
PRKNO60260 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.65□□□□□ -1.67
PRKNO60260 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
PRKNO60260 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
PRKNO60260 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.65□□□□□ -1.67
PRKNO60260 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
PRKNO60260 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.64□□□□□ -1.67
PRKNO60260 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PRKNO60260 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
PRKNO60260 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PRKNO60260 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PRKNO60260 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PRKNO60260 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.64□□□□□ -1.67
PRKNO60260 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PRKNO60260 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PRKNO60260 AP000473.2-201ENST00000602659 1537 ntBASIC4.64□□□□□ -1.67
PRKNO60260 RNU6-31P-201ENST00000384388 108 ntBASIC4.64□□□□□ -1.67
PRKNO60260 MIR137-201ENST00000385223 102 ntBASIC4.64□□□□□ -1.67
PRKNO60260 RNU6-796P-201ENST00000391086 107 ntBASIC4.64□□□□□ -1.67
PRKNO60260 ATP5HP3-201ENST00000396994 486 ntBASIC4.64□□□□□ -1.67
PRKNO60260 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.64□□□□□ -1.67
PRKNO60260 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC4.64□□□□□ -1.67
PRKNO60260 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC4.64□□□□□ -1.67
PRKNO60260 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC4.64□□□□□ -1.67
PRKNO60260 MTCO2P23-201ENST00000425216 680 ntBASIC4.64□□□□□ -1.67
PRKNO60260 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
PRKNO60260 USP12PY-201ENST00000427677 1064 ntBASIC4.64□□□□□ -1.67
PRKNO60260 COX6CP13-201ENST00000428703 226 ntBASIC4.64□□□□□ -1.67
PRKNO60260 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC4.64□□□□□ -1.67
PRKNO60260 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC4.64□□□□□ -1.67
PRKNO60260 RPS29P9-201ENST00000440360 171 ntBASIC4.64□□□□□ -1.67
PRKNO60260 AL137845.2-201ENST00000444292 988 ntBASIC4.64□□□□□ -1.67
PRKNO60260 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC4.64□□□□□ -1.67
PRKNO60260 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.64□□□□□ -1.67
PRKNO60260 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
PRKNO60260 HIGD1AP8-201ENST00000453927 274 ntBASIC4.64□□□□□ -1.67
PRKNO60260 AC239798.3-201ENST00000454459 408 ntBASIC4.64□□□□□ -1.67
PRKNO60260 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.64□□□□□ -1.67
PRKNO60260 AC008379.1-201ENST00000463655 464 ntBASIC4.64□□□□□ -1.67
PRKNO60260 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
PRKNO60260 CYCSP20-201ENST00000473154 315 ntBASIC4.64□□□□□ -1.67
PRKNO60260 AC116562.1-201ENST00000485355 781 ntBASIC4.64□□□□□ -1.67
PRKNO60260 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC4.64□□□□□ -1.67
PRKNO60260 MYL12BP2-201ENST00000503948 512 ntBASIC4.64□□□□□ -1.67
PRKNO60260 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.64□□□□□ -1.67
PRKNO60260 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC4.64□□□□□ -1.67
PRKNO60260 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms