Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 RN7SKP216-201ENST00000411050 312 ntBASIC3.84□□□□□ -1.79
SDCBPO00560 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC3.84□□□□□ -1.79
SDCBPO00560 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SDCBPO00560 AC016831.4-201ENST00000438302 307 ntBASIC3.84□□□□□ -1.79
SDCBPO00560 PTMAP6-201ENST00000439110 327 ntBASIC3.84□□□□□ -1.79
SDCBPO00560 AL589765.3-201ENST00000446084 462 ntBASIC3.84□□□□□ -1.79
SDCBPO00560 AL935212.3-201ENST00000450729 284 ntBASIC3.84□□□□□ -1.79
SDCBPO00560 PSMC1P13-201ENST00000458195 985 ntBASIC3.84□□□□□ -1.79
SDCBPO00560 RN7SL515P-201ENST00000463999 297 ntBASIC3.84□□□□□ -1.79
SDCBPO00560 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC3.84□□□□□ -1.79
SDCBPO00560 RPS26P28-201ENST00000470806 348 ntBASIC3.84□□□□□ -1.79
SDCBPO00560 SCARNA22-201ENST00000503991 125 ntBASIC3.84□□□□□ -1.79
SDCBPO00560 AC008638.1-201ENST00000506035 866 ntBASIC3.84□□□□□ -1.79
SDCBPO00560 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC3.84□□□□□ -1.79
SDCBPO00560 RNU2-30P-201ENST00000516209 141 ntBASIC3.84□□□□□ -1.79
SDCBPO00560 RN7SKP276-201ENST00000516242 268 ntBASIC3.84□□□□□ -1.79
SDCBPO00560 AC008694.2-201ENST00000517591 306 ntBASIC3.84□□□□□ -1.79
SDCBPO00560 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC3.84□□□□□ -1.79
SDCBPO00560 SOX5P1-201ENST00000524155 1127 ntBASIC3.84□□□□□ -1.79
SDCBPO00560 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC3.84□□□□□ -1.79
SDCBPO00560 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC3.84□□□□□ -1.79
SDCBPO00560 PCNPP1-201ENST00000552501 511 ntBASIC3.84□□□□□ -1.79
SDCBPO00560 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC3.84□□□□□ -1.79
SDCBPO00560 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC3.84□□□□□ -1.79
SDCBPO00560 AC005084.1-201ENST00000605160 304 ntBASIC3.84□□□□□ -1.79
SDCBPO00560 AC244517.3-201ENST00000616254 1235 ntBASIC3.84□□□□□ -1.79
SDCBPO00560 AL138721.1-201ENST00000616756 179 ntBASIC3.84□□□□□ -1.79
SDCBPO00560 AC009237.17-201ENST00000618111 748 ntBASIC3.84□□□□□ -1.79
SDCBPO00560 AC087385.3-201ENST00000620477 187 ntBASIC3.84□□□□□ -1.79
SDCBPO00560 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
SDCBPO00560 WDR75-207ENST00000631047 270 ntTSL 5 BASIC3.84□□□□□ -1.79
SDCBPO00560 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC3.84□□□□□ -1.79
SDCBPO00560 AC131971.1-201ENST00000332881 1482 ntBASIC3.84□□□□□ -1.8
SDCBPO00560 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC3.84□□□□□ -1.8
SDCBPO00560 CDY3P-201ENST00000454543 1618 ntBASIC3.84□□□□□ -1.8
SDCBPO00560 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
SDCBPO00560 CARF-203ENST00000414439 2099 ntTSL 2 BASIC3.83□□□□□ -1.8
SDCBPO00560 CA1-225ENST00000626824 2405 ntTSL 5 BASIC3.83□□□□□ -1.8
SDCBPO00560 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SDCBPO00560 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
SDCBPO00560 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
SDCBPO00560 RNU1-108P-201ENST00000362556 161 ntBASIC3.83□□□□□ -1.8
SDCBPO00560 RNU1-44P-201ENST00000384453 163 ntBASIC3.83□□□□□ -1.8
SDCBPO00560 RPS24P12-201ENST00000402084 394 ntBASIC3.83□□□□□ -1.8
SDCBPO00560 AC140479.3-201ENST00000418944 1126 ntBASIC3.83□□□□□ -1.8
SDCBPO00560 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC3.83□□□□□ -1.8
SDCBPO00560 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC3.83□□□□□ -1.8
SDCBPO00560 MAPRE1P3-201ENST00000435438 796 ntBASIC3.83□□□□□ -1.8
SDCBPO00560 AC097523.2-201ENST00000435551 652 ntBASIC3.83□□□□□ -1.8
SDCBPO00560 AC013410.1-201ENST00000436223 1232 ntBASIC3.83□□□□□ -1.8
SDCBPO00560 AC091685.2-201ENST00000454924 864 ntBASIC3.83□□□□□ -1.8
SDCBPO00560 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC3.83□□□□□ -1.8
SDCBPO00560 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC3.83□□□□□ -1.8
SDCBPO00560 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC3.83□□□□□ -1.8
SDCBPO00560 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC3.83□□□□□ -1.8
SDCBPO00560 NDUFB5P1-201ENST00000508134 564 ntBASIC3.83□□□□□ -1.8
SDCBPO00560 PPBPP1-201ENST00000510807 373 ntBASIC3.83□□□□□ -1.8
SDCBPO00560 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC3.83□□□□□ -1.8
SDCBPO00560 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC3.83□□□□□ -1.8
SDCBPO00560 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC3.83□□□□□ -1.8
SDCBPO00560 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC3.83□□□□□ -1.8
SDCBPO00560 MIR3934-201ENST00000579806 107 ntBASIC3.83□□□□□ -1.8
SDCBPO00560 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC3.83□□□□□ -1.8
SDCBPO00560 ADAD1P2-201ENST00000588476 646 ntBASIC3.83□□□□□ -1.8
SDCBPO00560 AL034374.2-201ENST00000605281 548 ntBASIC3.83□□□□□ -1.8
SDCBPO00560 AC211433.2-201ENST00000608433 387 ntBASIC3.83□□□□□ -1.8
SDCBPO00560 MIR7155-201ENST00000615925 56 ntBASIC3.83□□□□□ -1.8
SDCBPO00560 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SDCBPO00560 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SDCBPO00560 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SDCBPO00560 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.83□□□□□ -1.8
SDCBPO00560 AC135352.1-201ENST00000506173 1418 ntBASIC3.83□□□□□ -1.8
SDCBPO00560 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
SDCBPO00560 MFSD4BP1-201ENST00000513330 1552 ntBASIC3.83□□□□□ -1.8
SDCBPO00560 AC108467.2-201ENST00000617640 1597 ntBASIC3.83□□□□□ -1.8
SDCBPO00560 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SDCBPO00560 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
SDCBPO00560 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
SDCBPO00560 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
SDCBPO00560 NXPH1-205ENST00000602349 1953 ntBASIC3.83□□□□□ -1.8
SDCBPO00560 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC3.83□□□□□ -1.8
SDCBPO00560 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SDCBPO00560 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
SDCBPO00560 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SDCBPO00560 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SDCBPO00560 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SDCBPO00560 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
SDCBPO00560 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC3.82□□□□□ -1.8
SDCBPO00560 DDX18P6-201ENST00000450119 1997 ntBASIC3.82□□□□□ -1.8
SDCBPO00560 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SDCBPO00560 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SDCBPO00560 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC3.82□□□□□ -1.8
SDCBPO00560 RNA5SP22-201ENST00000365393 109 ntBASIC3.82□□□□□ -1.8
SDCBPO00560 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC3.82□□□□□ -1.8
SDCBPO00560 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
SDCBPO00560 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
SDCBPO00560 BMS1P3-201ENST00000372011 932 ntBASIC3.82□□□□□ -1.8
SDCBPO00560 RNU1-63P-201ENST00000383902 164 ntBASIC3.82□□□□□ -1.8
SDCBPO00560 FCF1P5-201ENST00000406490 482 ntBASIC3.82□□□□□ -1.8
SDCBPO00560 VN1R8P-201ENST00000407739 893 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms