Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CHKB-CPT1BH3BT56 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC2.48□□□□□ -2.01
CHKB-CPT1BH3BT56 AC007790.1-201ENST00000439081 782 ntBASIC2.48□□□□□ -2.01
CHKB-CPT1BH3BT56 AL512605.1-202ENST00000441919 381 ntBASIC2.48□□□□□ -2.01
CHKB-CPT1BH3BT56 AL359955.2-201ENST00000445380 353 ntBASIC2.48□□□□□ -2.01
CHKB-CPT1BH3BT56 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC2.48□□□□□ -2.01
CHKB-CPT1BH3BT56 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CHKB-CPT1BH3BT56 RPL12P26-201ENST00000452430 487 ntBASIC2.48□□□□□ -2.01
CHKB-CPT1BH3BT56 CST12P-201ENST00000457644 362 ntBASIC2.48□□□□□ -2.01
CHKB-CPT1BH3BT56 RN7SL329P-201ENST00000467740 299 ntBASIC2.48□□□□□ -2.01
CHKB-CPT1BH3BT56 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC2.48□□□□□ -2.01
CHKB-CPT1BH3BT56 SNRPGP3-201ENST00000469405 227 ntBASIC2.48□□□□□ -2.01
CHKB-CPT1BH3BT56 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC2.48□□□□□ -2.01
CHKB-CPT1BH3BT56 H3F3AP5-201ENST00000475267 429 ntBASIC2.48□□□□□ -2.01
CHKB-CPT1BH3BT56 AC078785.3-201ENST00000476607 425 ntBASIC2.48□□□□□ -2.01
CHKB-CPT1BH3BT56 UBTFL6-201ENST00000477929 1024 ntBASIC2.48□□□□□ -2.01
CHKB-CPT1BH3BT56 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC2.48□□□□□ -2.01
CHKB-CPT1BH3BT56 RPL23AP72-201ENST00000492447 435 ntBASIC2.48□□□□□ -2.01
CHKB-CPT1BH3BT56 AC017037.1-201ENST00000508460 471 ntBASIC2.48□□□□□ -2.01
CHKB-CPT1BH3BT56 AC109481.1-201ENST00000509173 282 ntBASIC2.48□□□□□ -2.01
CHKB-CPT1BH3BT56 RN7SKP238-201ENST00000516483 249 ntBASIC2.48□□□□□ -2.01
CHKB-CPT1BH3BT56 RNU6-1231P-201ENST00000517185 103 ntBASIC2.48□□□□□ -2.01
CHKB-CPT1BH3BT56 RN7SKP64-201ENST00000517206 328 ntBASIC2.48□□□□□ -2.01
CHKB-CPT1BH3BT56 RNU6-709P-201ENST00000517257 104 ntBASIC2.48□□□□□ -2.01
CHKB-CPT1BH3BT56 AC093331.1-201ENST00000521474 169 ntBASIC2.48□□□□□ -2.01
CHKB-CPT1BH3BT56 HMGB1P40-201ENST00000525121 540 ntBASIC2.48□□□□□ -2.01
CHKB-CPT1BH3BT56 AC024405.1-201ENST00000532521 1042 ntBASIC2.48□□□□□ -2.01
CHKB-CPT1BH3BT56 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC2.48□□□□□ -2.01
CHKB-CPT1BH3BT56 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC2.48□□□□□ -2.01
CHKB-CPT1BH3BT56 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC2.48□□□□□ -2.01
CHKB-CPT1BH3BT56 NIFKP4-201ENST00000567275 1192 ntBASIC2.48□□□□□ -2.01
CHKB-CPT1BH3BT56 MIR4685-201ENST00000578185 69 ntBASIC2.48□□□□□ -2.01
CHKB-CPT1BH3BT56 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC2.48□□□□□ -2.01
CHKB-CPT1BH3BT56 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC2.48□□□□□ -2.01
CHKB-CPT1BH3BT56 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC2.48□□□□□ -2.01
CHKB-CPT1BH3BT56 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC2.48□□□□□ -2.01
CHKB-CPT1BH3BT56 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC2.48□□□□□ -2.01
CHKB-CPT1BH3BT56 AC092653.1-201ENST00000608509 531 ntBASIC2.48□□□□□ -2.01
CHKB-CPT1BH3BT56 MTCO1P1-201ENST00000624263 1081 ntBASIC2.48□□□□□ -2.01
CHKB-CPT1BH3BT56 AP000843.1-201ENST00000624880 701 ntBASIC2.48□□□□□ -2.01
CHKB-CPT1BH3BT56 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC2.48□□□□□ -2.01
CHKB-CPT1BH3BT56 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC2.48□□□□□ -2.01
CHKB-CPT1BH3BT56 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC2.48□□□□□ -2.01
CHKB-CPT1BH3BT56 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC2.48□□□□□ -2.01
CHKB-CPT1BH3BT56 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC2.48□□□□□ -2.01
CHKB-CPT1BH3BT56 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CHKB-CPT1BH3BT56 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CHKB-CPT1BH3BT56 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CHKB-CPT1BH3BT56 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CHKB-CPT1BH3BT56 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
CHKB-CPT1BH3BT56 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CHKB-CPT1BH3BT56 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CHKB-CPT1BH3BT56 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CHKB-CPT1BH3BT56 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
CHKB-CPT1BH3BT56 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CHKB-CPT1BH3BT56 RNA5SP110-201ENST00000362638 115 ntBASIC2.47□□□□□ -2.01
CHKB-CPT1BH3BT56 RNA5SP85-201ENST00000365378 119 ntBASIC2.47□□□□□ -2.01
CHKB-CPT1BH3BT56 U3.15-201ENST00000365398 212 ntBASIC2.47□□□□□ -2.01
CHKB-CPT1BH3BT56 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CHKB-CPT1BH3BT56 RNA5SP332-201ENST00000391063 115 ntBASIC2.47□□□□□ -2.01
CHKB-CPT1BH3BT56 AMZ2P2-201ENST00000406819 1057 ntBASIC2.47□□□□□ -2.01
CHKB-CPT1BH3BT56 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC2.47□□□□□ -2.01
CHKB-CPT1BH3BT56 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC2.47□□□□□ -2.01
CHKB-CPT1BH3BT56 AL133173.1-201ENST00000423458 397 ntBASIC2.47□□□□□ -2.01
CHKB-CPT1BH3BT56 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
CHKB-CPT1BH3BT56 APCDD1L-AS1-204ENST00000427794 461 ntTSL 3 BASIC2.47□□□□□ -2.01
CHKB-CPT1BH3BT56 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC2.47□□□□□ -2.01
CHKB-CPT1BH3BT56 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC2.47□□□□□ -2.01
CHKB-CPT1BH3BT56 AC022022.1-201ENST00000430304 178 ntBASIC2.47□□□□□ -2.01
CHKB-CPT1BH3BT56 RPS21P1-201ENST00000434479 247 ntBASIC2.47□□□□□ -2.01
CHKB-CPT1BH3BT56 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC2.47□□□□□ -2.01
CHKB-CPT1BH3BT56 AL138787.1-202ENST00000437804 898 ntBASIC2.47□□□□□ -2.01
CHKB-CPT1BH3BT56 RPE-210ENST00000438204 796 ntTSL 2 BASIC2.47□□□□□ -2.01
CHKB-CPT1BH3BT56 AC083863.1-201ENST00000438811 231 ntBASIC2.47□□□□□ -2.01
CHKB-CPT1BH3BT56 AL592114.2-201ENST00000440142 532 ntBASIC2.47□□□□□ -2.01
CHKB-CPT1BH3BT56 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC2.47□□□□□ -2.01
CHKB-CPT1BH3BT56 AC245517.2-201ENST00000442890 346 ntBASIC2.47□□□□□ -2.01
CHKB-CPT1BH3BT56 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC2.47□□□□□ -2.01
CHKB-CPT1BH3BT56 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC2.47□□□□□ -2.01
CHKB-CPT1BH3BT56 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC2.47□□□□□ -2.01
CHKB-CPT1BH3BT56 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC2.47□□□□□ -2.01
CHKB-CPT1BH3BT56 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC2.47□□□□□ -2.01
CHKB-CPT1BH3BT56 CFTRP1-201ENST00000456646 183 ntBASIC2.47□□□□□ -2.01
CHKB-CPT1BH3BT56 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CHKB-CPT1BH3BT56 AP000893.1-201ENST00000474462 794 ntBASIC2.47□□□□□ -2.01
CHKB-CPT1BH3BT56 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC2.47□□□□□ -2.01
CHKB-CPT1BH3BT56 RN7SL502P-201ENST00000481857 290 ntBASIC2.47□□□□□ -2.01
CHKB-CPT1BH3BT56 RPS21P4-201ENST00000487122 248 ntBASIC2.47□□□□□ -2.01
CHKB-CPT1BH3BT56 AC008897.1-201ENST00000494006 347 ntBASIC2.47□□□□□ -2.01
CHKB-CPT1BH3BT56 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC2.47□□□□□ -2.01
CHKB-CPT1BH3BT56 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC2.47□□□□□ -2.01
CHKB-CPT1BH3BT56 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC2.47□□□□□ -2.01
CHKB-CPT1BH3BT56 AL158068.1-201ENST00000506116 616 ntBASIC2.47□□□□□ -2.01
CHKB-CPT1BH3BT56 AC106799.2-201ENST00000507435 721 ntTSL 5 BASIC2.47□□□□□ -2.01
CHKB-CPT1BH3BT56 AC109458.1-201ENST00000508858 316 ntBASIC2.47□□□□□ -2.01
CHKB-CPT1BH3BT56 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC2.47□□□□□ -2.01
CHKB-CPT1BH3BT56 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC2.47□□□□□ -2.01
CHKB-CPT1BH3BT56 GTF2F2P1-201ENST00000511083 675 ntBASIC2.47□□□□□ -2.01
CHKB-CPT1BH3BT56 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC2.47□□□□□ -2.01
CHKB-CPT1BH3BT56 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms