Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
TMX2-CTNND1H3BSU7 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
TMX2-CTNND1H3BSU7 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
TMX2-CTNND1H3BSU7 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
TMX2-CTNND1H3BSU7 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.66
TMX2-CTNND1H3BSU7 AC007382.1-201ENST00000624376 2618 ntBASIC4.65□□□□□ -1.66
TMX2-CTNND1H3BSU7 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
TMX2-CTNND1H3BSU7 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
TMX2-CTNND1H3BSU7 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.66
TMX2-CTNND1H3BSU7 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
TMX2-CTNND1H3BSU7 SNORD113.2-201ENST00000364166 89 ntBASIC4.65□□□□□ -1.67
TMX2-CTNND1H3BSU7 LRRC37BP1-201ENST00000398851 714 ntBASIC4.65□□□□□ -1.67
TMX2-CTNND1H3BSU7 AL592291.1-201ENST00000403830 352 ntBASIC4.65□□□□□ -1.67
TMX2-CTNND1H3BSU7 RN7SKP267-201ENST00000410381 285 ntBASIC4.65□□□□□ -1.67
TMX2-CTNND1H3BSU7 RN7SKP106-201ENST00000410832 272 ntBASIC4.65□□□□□ -1.67
TMX2-CTNND1H3BSU7 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.65□□□□□ -1.67
TMX2-CTNND1H3BSU7 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.65□□□□□ -1.67
TMX2-CTNND1H3BSU7 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.65□□□□□ -1.67
TMX2-CTNND1H3BSU7 RPL36AP15-201ENST00000444514 266 ntBASIC4.65□□□□□ -1.67
TMX2-CTNND1H3BSU7 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.65□□□□□ -1.67
TMX2-CTNND1H3BSU7 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.65□□□□□ -1.67
TMX2-CTNND1H3BSU7 ZFRP1-201ENST00000457579 2970 ntBASIC4.65□□□□□ -1.67
TMX2-CTNND1H3BSU7 AC005412.2-201ENST00000492004 341 ntBASIC4.65□□□□□ -1.67
TMX2-CTNND1H3BSU7 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
TMX2-CTNND1H3BSU7 IGBP1P5-201ENST00000507524 1000 ntBASIC4.65□□□□□ -1.67
TMX2-CTNND1H3BSU7 AC021146.3-201ENST00000511911 260 ntBASIC4.65□□□□□ -1.67
TMX2-CTNND1H3BSU7 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.65□□□□□ -1.67
TMX2-CTNND1H3BSU7 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.65□□□□□ -1.67
TMX2-CTNND1H3BSU7 AC133555.2-201ENST00000550213 292 ntBASIC4.65□□□□□ -1.67
TMX2-CTNND1H3BSU7 CYCSP40-201ENST00000575927 294 ntBASIC4.65□□□□□ -1.67
TMX2-CTNND1H3BSU7 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.65□□□□□ -1.67
TMX2-CTNND1H3BSU7 AC022726.1-201ENST00000587475 207 ntBASIC4.65□□□□□ -1.67
TMX2-CTNND1H3BSU7 AL356218.2-201ENST00000605264 187 ntBASIC4.65□□□□□ -1.67
TMX2-CTNND1H3BSU7 AL121932.1-201ENST00000605542 214 ntBASIC4.65□□□□□ -1.67
TMX2-CTNND1H3BSU7 AC092653.1-201ENST00000608509 531 ntBASIC4.65□□□□□ -1.67
TMX2-CTNND1H3BSU7 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
TMX2-CTNND1H3BSU7 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.65□□□□□ -1.67
TMX2-CTNND1H3BSU7 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.65□□□□□ -1.67
TMX2-CTNND1H3BSU7 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
TMX2-CTNND1H3BSU7 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.64□□□□□ -1.67
TMX2-CTNND1H3BSU7 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
TMX2-CTNND1H3BSU7 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
TMX2-CTNND1H3BSU7 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.64□□□□□ -1.67
TMX2-CTNND1H3BSU7 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
TMX2-CTNND1H3BSU7 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
TMX2-CTNND1H3BSU7 AC027290.2-201ENST00000623210 18662 ntBASIC4.64□□□□□ -1.67
TMX2-CTNND1H3BSU7 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
TMX2-CTNND1H3BSU7 OR5AQ1P-202ENST00000641257 1534 ntBASIC4.64□□□□□ -1.67
TMX2-CTNND1H3BSU7 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.64□□□□□ -1.67
TMX2-CTNND1H3BSU7 SMC4P1-201ENST00000414479 527 ntBASIC4.64□□□□□ -1.67
TMX2-CTNND1H3BSU7 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.64□□□□□ -1.67
TMX2-CTNND1H3BSU7 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.64□□□□□ -1.67
TMX2-CTNND1H3BSU7 ARL2BPP10-201ENST00000446487 531 ntBASIC4.64□□□□□ -1.67
TMX2-CTNND1H3BSU7 RPL7L1P1-201ENST00000448259 785 ntBASIC4.64□□□□□ -1.67
TMX2-CTNND1H3BSU7 AC010733.1-201ENST00000451515 401 ntBASIC4.64□□□□□ -1.67
TMX2-CTNND1H3BSU7 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.64□□□□□ -1.67
TMX2-CTNND1H3BSU7 AC022795.1-201ENST00000473808 480 ntBASIC4.64□□□□□ -1.67
TMX2-CTNND1H3BSU7 RPL21P6-201ENST00000479171 504 ntBASIC4.64□□□□□ -1.67
TMX2-CTNND1H3BSU7 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.64□□□□□ -1.67
TMX2-CTNND1H3BSU7 OR2A3P-201ENST00000493774 953 ntBASIC4.64□□□□□ -1.67
TMX2-CTNND1H3BSU7 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC4.64□□□□□ -1.67
TMX2-CTNND1H3BSU7 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.64□□□□□ -1.67
TMX2-CTNND1H3BSU7 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.64□□□□□ -1.67
TMX2-CTNND1H3BSU7 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
TMX2-CTNND1H3BSU7 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.64□□□□□ -1.67
TMX2-CTNND1H3BSU7 HMGB1P19-201ENST00000517578 577 ntBASIC4.64□□□□□ -1.67
TMX2-CTNND1H3BSU7 EIF4EP5-201ENST00000528228 640 ntBASIC4.64□□□□□ -1.67
TMX2-CTNND1H3BSU7 AC011270.1-201ENST00000558606 583 ntBASIC4.64□□□□□ -1.67
TMX2-CTNND1H3BSU7 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
TMX2-CTNND1H3BSU7 SNORA74C-1-201ENST00000580726 201 ntBASIC4.64□□□□□ -1.67
TMX2-CTNND1H3BSU7 MIR4715-201ENST00000584117 79 ntBASIC4.64□□□□□ -1.67
TMX2-CTNND1H3BSU7 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.64□□□□□ -1.67
TMX2-CTNND1H3BSU7 AC005191.1-201ENST00000603950 358 ntBASIC4.64□□□□□ -1.67
TMX2-CTNND1H3BSU7 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.64□□□□□ -1.67
TMX2-CTNND1H3BSU7 AC083809.1-201ENST00000615051 472 ntBASIC4.64□□□□□ -1.67
TMX2-CTNND1H3BSU7 AL359757.1-201ENST00000623176 255 ntBASIC4.64□□□□□ -1.67
TMX2-CTNND1H3BSU7 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
TMX2-CTNND1H3BSU7 AL034370.1-201ENST00000397254 1590 ntBASIC4.64□□□□□ -1.67
TMX2-CTNND1H3BSU7 AC104118.1-201ENST00000607625 1589 ntBASIC4.64□□□□□ -1.67
TMX2-CTNND1H3BSU7 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.64□□□□□ -1.67
TMX2-CTNND1H3BSU7 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
TMX2-CTNND1H3BSU7 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
TMX2-CTNND1H3BSU7 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
TMX2-CTNND1H3BSU7 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
TMX2-CTNND1H3BSU7 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
TMX2-CTNND1H3BSU7 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.63□□□□□ -1.67
TMX2-CTNND1H3BSU7 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC4.63□□□□□ -1.67
TMX2-CTNND1H3BSU7 OR56B2P-202ENST00000641377 2453 ntBASIC4.63□□□□□ -1.67
TMX2-CTNND1H3BSU7 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
TMX2-CTNND1H3BSU7 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
TMX2-CTNND1H3BSU7 IL6STP1-201ENST00000346911 1020 ntBASIC4.63□□□□□ -1.67
TMX2-CTNND1H3BSU7 RPL32P3-201ENST00000359025 275 ntBASIC4.63□□□□□ -1.67
TMX2-CTNND1H3BSU7 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
TMX2-CTNND1H3BSU7 AL049697.2-201ENST00000403708 294 ntBASIC4.63□□□□□ -1.67
TMX2-CTNND1H3BSU7 RNA5SP345-201ENST00000410646 108 ntBASIC4.63□□□□□ -1.67
TMX2-CTNND1H3BSU7 TBCAP2-201ENST00000416175 326 ntBASIC4.63□□□□□ -1.67
TMX2-CTNND1H3BSU7 TMBIM7P-201ENST00000418074 855 ntBASIC4.63□□□□□ -1.67
TMX2-CTNND1H3BSU7 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.63□□□□□ -1.67
TMX2-CTNND1H3BSU7 CKS1BP6-201ENST00000424932 240 ntBASIC4.63□□□□□ -1.67
TMX2-CTNND1H3BSU7 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms