Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
TMEM88BA6NKF7 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
TMEM88BA6NKF7 Z99129.4-201ENST00000624649 2435 ntBASIC7.3□□□□□ -1.24
TMEM88BA6NKF7 PDZK1P1-202ENST00000425209 1350 ntBASIC7.3□□□□□ -1.24
TMEM88BA6NKF7 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC7.3□□□□□ -1.24
TMEM88BA6NKF7 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC7.3□□□□□ -1.24
TMEM88BA6NKF7 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC7.3□□□□□ -1.24
TMEM88BA6NKF7 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC7.29□□□□□ -1.24
TMEM88BA6NKF7 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC7.29□□□□□ -1.24
TMEM88BA6NKF7 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
TMEM88BA6NKF7 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC7.29□□□□□ -1.24
TMEM88BA6NKF7 MTCO1P14-201ENST00000441695 1559 ntBASIC7.29□□□□□ -1.24
TMEM88BA6NKF7 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC7.29□□□□□ -1.24
TMEM88BA6NKF7 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
TMEM88BA6NKF7 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
TMEM88BA6NKF7 AC006019.2-201ENST00000451116 3044 ntTSL 2 BASIC7.29□□□□□ -1.24
TMEM88BA6NKF7 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
TMEM88BA6NKF7 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC7.29□□□□□ -1.24
TMEM88BA6NKF7 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
TMEM88BA6NKF7 TTLL5-207ENST00000554510 2624 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
TMEM88BA6NKF7 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
TMEM88BA6NKF7 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
TMEM88BA6NKF7 UGT2B4-201ENST00000305107 2103 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
TMEM88BA6NKF7 OR4G2P-201ENST00000328113 903 ntBASIC7.29□□□□□ -1.24
TMEM88BA6NKF7 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC7.29□□□□□ -1.24
TMEM88BA6NKF7 ZNF603P-201ENST00000405613 487 ntBASIC7.29□□□□□ -1.24
TMEM88BA6NKF7 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
TMEM88BA6NKF7 RPL23AP27-201ENST00000415161 451 ntBASIC7.29□□□□□ -1.24
TMEM88BA6NKF7 FCF1P2-201ENST00000415284 583 ntBASIC7.29□□□□□ -1.24
TMEM88BA6NKF7 AC048351.1-201ENST00000420064 602 ntBASIC7.29□□□□□ -1.24
TMEM88BA6NKF7 RPS27AP14-201ENST00000422868 454 ntBASIC7.29□□□□□ -1.24
TMEM88BA6NKF7 AL953862.1-201ENST00000423016 168 ntBASIC7.29□□□□□ -1.24
TMEM88BA6NKF7 CYP4F32P-201ENST00000426492 504 ntBASIC7.29□□□□□ -1.24
TMEM88BA6NKF7 DYNLL1P7-201ENST00000429273 258 ntBASIC7.29□□□□□ -1.24
TMEM88BA6NKF7 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC7.29□□□□□ -1.24
TMEM88BA6NKF7 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC7.29□□□□□ -1.24
TMEM88BA6NKF7 AL445466.1-201ENST00000448432 357 ntBASIC7.29□□□□□ -1.24
TMEM88BA6NKF7 AC093392.2-201ENST00000450682 337 ntBASIC7.29□□□□□ -1.24
TMEM88BA6NKF7 GEMIN2P1-201ENST00000454246 752 ntBASIC7.29□□□□□ -1.24
TMEM88BA6NKF7 AC005532.2-201ENST00000467154 373 ntBASIC7.29□□□□□ -1.24
TMEM88BA6NKF7 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC7.29□□□□□ -1.24
TMEM88BA6NKF7 EEF1A1P25-201ENST00000495704 1267 ntBASIC7.29□□□□□ -1.24
TMEM88BA6NKF7 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC7.29□□□□□ -1.24
TMEM88BA6NKF7 AC025674.1-201ENST00000507074 324 ntBASIC7.29□□□□□ -1.24
TMEM88BA6NKF7 RN7SKP244-201ENST00000516513 307 ntBASIC7.29□□□□□ -1.24
TMEM88BA6NKF7 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC7.29□□□□□ -1.24
TMEM88BA6NKF7 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC7.29□□□□□ -1.24
TMEM88BA6NKF7 DPPA3P2-201ENST00000553589 478 ntBASIC7.29□□□□□ -1.24
TMEM88BA6NKF7 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC7.29□□□□□ -1.24
TMEM88BA6NKF7 AC009063.1-201ENST00000563342 702 ntBASIC7.29□□□□□ -1.24
TMEM88BA6NKF7 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC7.29□□□□□ -1.24
TMEM88BA6NKF7 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
TMEM88BA6NKF7 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC7.29□□□□□ -1.24
TMEM88BA6NKF7 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC7.29□□□□□ -1.24
TMEM88BA6NKF7 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC7.29□□□□□ -1.24
TMEM88BA6NKF7 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
TMEM88BA6NKF7 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
TMEM88BA6NKF7 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC7.29□□□□□ -1.24
TMEM88BA6NKF7 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
TMEM88BA6NKF7 AL031985.3-201ENST00000565390 2449 ntBASIC7.29□□□□□ -1.24
TMEM88BA6NKF7 MSL3P1-202ENST00000440028 1468 ntBASIC7.29□□□□□ -1.24
TMEM88BA6NKF7 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
TMEM88BA6NKF7 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
TMEM88BA6NKF7 IGSF11-201ENST00000354673 3206 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
TMEM88BA6NKF7 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC7.29□□□□□ -1.24
TMEM88BA6NKF7 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
TMEM88BA6NKF7 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC7.29□□□□□ -1.24
TMEM88BA6NKF7 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
TMEM88BA6NKF7 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC7.29□□□□□ -1.24
TMEM88BA6NKF7 AL359396.1-201ENST00000623151 2376 ntBASIC7.28□□□□□ -1.24
TMEM88BA6NKF7 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC7.28□□□□□ -1.24
TMEM88BA6NKF7 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
TMEM88BA6NKF7 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
TMEM88BA6NKF7 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
TMEM88BA6NKF7 RBPJP2-201ENST00000618187 1444 ntBASIC7.28□□□□□ -1.24
TMEM88BA6NKF7 ALB-219ENST00000621085 1418 ntTSL 5 BASIC7.28□□□□□ -1.24
TMEM88BA6NKF7 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
TMEM88BA6NKF7 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
TMEM88BA6NKF7 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC7.28□□□□□ -1.24
TMEM88BA6NKF7 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC7.28□□□□□ -1.24
TMEM88BA6NKF7 RNA5SP507-201ENST00000363603 121 ntBASIC7.28□□□□□ -1.24
TMEM88BA6NKF7 Y_RNA.248-201ENST00000364501 109 ntBASIC7.28□□□□□ -1.24
TMEM88BA6NKF7 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC7.28□□□□□ -1.24
TMEM88BA6NKF7 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC7.28□□□□□ -1.24
TMEM88BA6NKF7 RNU6-348P-201ENST00000384386 107 ntBASIC7.28□□□□□ -1.24
TMEM88BA6NKF7 MIR550A3-201ENST00000390735 95 ntBASIC7.28□□□□□ -1.24
TMEM88BA6NKF7 AC025750.1-201ENST00000399891 379 ntBASIC7.28□□□□□ -1.24
TMEM88BA6NKF7 RNU2-65P-201ENST00000410162 185 ntBASIC7.28□□□□□ -1.24
TMEM88BA6NKF7 MTND1P21-201ENST00000412991 285 ntBASIC7.28□□□□□ -1.24
TMEM88BA6NKF7 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
TMEM88BA6NKF7 AC005033.1-201ENST00000428904 813 ntBASIC7.28□□□□□ -1.24
TMEM88BA6NKF7 RPS26P40-201ENST00000435209 294 ntBASIC7.28□□□□□ -1.24
TMEM88BA6NKF7 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC7.28□□□□□ -1.24
TMEM88BA6NKF7 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC7.28□□□□□ -1.24
TMEM88BA6NKF7 HMGB1P4-201ENST00000455362 567 ntBASIC7.28□□□□□ -1.24
TMEM88BA6NKF7 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC7.28□□□□□ -1.24
TMEM88BA6NKF7 AF279873.1-201ENST00000523393 313 ntBASIC7.28□□□□□ -1.24
TMEM88BA6NKF7 OR4A45P-201ENST00000529954 901 ntBASIC7.28□□□□□ -1.24
TMEM88BA6NKF7 LDHC-203ENST00000535809 757 ntTSL 5 BASIC7.28□□□□□ -1.24
TMEM88BA6NKF7 LDHC-205ENST00000537486 583 ntTSL 5 BASIC7.28□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 152.3 ms