Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
TBC1D3FA6NER0 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
TBC1D3FA6NER0 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
TBC1D3FA6NER0 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
TBC1D3FA6NER0 AP005435.3-201ENST00000531260 3198 ntBASIC5.29□□□□□ -1.56
TBC1D3FA6NER0 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.29□□□□□ -1.56
TBC1D3FA6NER0 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
TBC1D3FA6NER0 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.29□□□□□ -1.56
TBC1D3FA6NER0 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.29□□□□□ -1.56
TBC1D3FA6NER0 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
TBC1D3FA6NER0 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
TBC1D3FA6NER0 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.29□□□□□ -1.56
TBC1D3FA6NER0 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TBC1D3FA6NER0 AC016745.2-201ENST00000608834 3443 ntBASIC5.29□□□□□ -1.56
TBC1D3FA6NER0 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.29□□□□□ -1.56
TBC1D3FA6NER0 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TBC1D3FA6NER0 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.28□□□□□ -1.56
TBC1D3FA6NER0 AC092747.4-201ENST00000620519 1861 ntBASIC5.28□□□□□ -1.56
TBC1D3FA6NER0 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.28□□□□□ -1.56
TBC1D3FA6NER0 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC5.28□□□□□ -1.56
TBC1D3FA6NER0 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TBC1D3FA6NER0 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
TBC1D3FA6NER0 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TBC1D3FA6NER0 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
TBC1D3FA6NER0 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.28□□□□□ -1.56
TBC1D3FA6NER0 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TBC1D3FA6NER0 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC5.28□□□□□ -1.56
TBC1D3FA6NER0 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
TBC1D3FA6NER0 OR51B3P-201ENST00000412287 913 ntBASIC5.28□□□□□ -1.56
TBC1D3FA6NER0 AC013404.1-201ENST00000413068 249 ntBASIC5.28□□□□□ -1.56
TBC1D3FA6NER0 VTA1P1-201ENST00000414044 866 ntBASIC5.28□□□□□ -1.56
TBC1D3FA6NER0 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.28□□□□□ -1.56
TBC1D3FA6NER0 AL592310.1-201ENST00000414330 671 ntBASIC5.28□□□□□ -1.56
TBC1D3FA6NER0 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.28□□□□□ -1.56
TBC1D3FA6NER0 LIPT1P1-201ENST00000415870 1186 ntBASIC5.28□□□□□ -1.56
TBC1D3FA6NER0 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.28□□□□□ -1.56
TBC1D3FA6NER0 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC5.28□□□□□ -1.56
TBC1D3FA6NER0 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC5.28□□□□□ -1.56
TBC1D3FA6NER0 AC138761.5-201ENST00000433967 325 ntBASIC5.28□□□□□ -1.56
TBC1D3FA6NER0 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TBC1D3FA6NER0 CYCSP11-201ENST00000436426 315 ntBASIC5.28□□□□□ -1.56
TBC1D3FA6NER0 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.28□□□□□ -1.56
TBC1D3FA6NER0 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC5.28□□□□□ -1.56
TBC1D3FA6NER0 PSMD10P3-201ENST00000437000 448 ntBASIC5.28□□□□□ -1.56
TBC1D3FA6NER0 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.28□□□□□ -1.56
TBC1D3FA6NER0 ELOCP13-201ENST00000443934 329 ntBASIC5.28□□□□□ -1.56
TBC1D3FA6NER0 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
TBC1D3FA6NER0 OR51B8P-201ENST00000449892 769 ntBASIC5.28□□□□□ -1.56
TBC1D3FA6NER0 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC5.28□□□□□ -1.56
TBC1D3FA6NER0 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.28□□□□□ -1.56
TBC1D3FA6NER0 RN7SL197P-201ENST00000466981 299 ntBASIC5.28□□□□□ -1.56
TBC1D3FA6NER0 AC020898.1-201ENST00000474167 787 ntBASIC5.28□□□□□ -1.56
TBC1D3FA6NER0 COX6B1P2-201ENST00000489624 230 ntBASIC5.28□□□□□ -1.56
TBC1D3FA6NER0 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.28□□□□□ -1.56
TBC1D3FA6NER0 AC113420.1-201ENST00000507903 571 ntBASIC5.28□□□□□ -1.56
TBC1D3FA6NER0 AC021106.1-201ENST00000509020 1058 ntBASIC5.28□□□□□ -1.56
TBC1D3FA6NER0 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC5.28□□□□□ -1.56
TBC1D3FA6NER0 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.28□□□□□ -1.56
TBC1D3FA6NER0 RNU6-1028P-201ENST00000517164 93 ntBASIC5.28□□□□□ -1.56
TBC1D3FA6NER0 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.28□□□□□ -1.56
TBC1D3FA6NER0 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC5.28□□□□□ -1.56
TBC1D3FA6NER0 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC5.28□□□□□ -1.56
TBC1D3FA6NER0 OR10V3P-201ENST00000525712 725 ntBASIC5.28□□□□□ -1.56
TBC1D3FA6NER0 AP000676.2-201ENST00000529711 301 ntBASIC5.28□□□□□ -1.56
TBC1D3FA6NER0 OR8K4P-201ENST00000534608 872 ntBASIC5.28□□□□□ -1.56
TBC1D3FA6NER0 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC5.28□□□□□ -1.56
TBC1D3FA6NER0 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC5.28□□□□□ -1.56
TBC1D3FA6NER0 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
TBC1D3FA6NER0 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
TBC1D3FA6NER0 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC5.28□□□□□ -1.56
TBC1D3FA6NER0 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.28□□□□□ -1.56
TBC1D3FA6NER0 AC011447.4-201ENST00000587562 111 ntBASIC5.28□□□□□ -1.56
TBC1D3FA6NER0 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.28□□□□□ -1.56
TBC1D3FA6NER0 AC010487.1-201ENST00000594408 1172 ntBASIC5.28□□□□□ -1.56
TBC1D3FA6NER0 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC5.28□□□□□ -1.56
TBC1D3FA6NER0 AL450336.1-201ENST00000605180 586 ntBASIC5.28□□□□□ -1.56
TBC1D3FA6NER0 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.28□□□□□ -1.56
TBC1D3FA6NER0 AC116651.1-201ENST00000609724 556 ntBASIC5.28□□□□□ -1.56
TBC1D3FA6NER0 Mico1.1-201ENST00000611698 204 ntBASIC5.28□□□□□ -1.56
TBC1D3FA6NER0 AL035461.2-201ENST00000619201 524 ntBASIC5.28□□□□□ -1.56
TBC1D3FA6NER0 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.28□□□□□ -1.56
TBC1D3FA6NER0 AC007342.8-201ENST00000623278 678 ntBASIC5.28□□□□□ -1.56
TBC1D3FA6NER0 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.28□□□□□ -1.56
TBC1D3FA6NER0 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TBC1D3FA6NER0 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.28□□□□□ -1.56
TBC1D3FA6NER0 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TBC1D3FA6NER0 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.28□□□□□ -1.56
TBC1D3FA6NER0 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TBC1D3FA6NER0 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.28□□□□□ -1.56
TBC1D3FA6NER0 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.28□□□□□ -1.56
TBC1D3FA6NER0 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
TBC1D3FA6NER0 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.28□□□□□ -1.56
TBC1D3FA6NER0 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.27□□□□□ -1.57
TBC1D3FA6NER0 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
TBC1D3FA6NER0 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.27□□□□□ -1.57
TBC1D3FA6NER0 ABCC13-202ENST00000463099 3842 ntBASIC5.27□□□□□ -1.57
TBC1D3FA6NER0 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
TBC1D3FA6NER0 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
TBC1D3FA6NER0 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.27□□□□□ -1.57
TBC1D3FA6NER0 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 129.1 ms