Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 RPS27P20-201ENST00000492051 246 ntBASIC2.3□□□□□ -2.04
LINC01558Q9Y6Z2 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC2.3□□□□□ -2.04
LINC01558Q9Y6Z2 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC2.3□□□□□ -2.04
LINC01558Q9Y6Z2 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC2.3□□□□□ -2.04
LINC01558Q9Y6Z2 AC025458.1-201ENST00000506046 166 ntBASIC2.3□□□□□ -2.04
LINC01558Q9Y6Z2 AC026784.1-201ENST00000507986 352 ntBASIC2.3□□□□□ -2.04
LINC01558Q9Y6Z2 OSTC-204ENST00000512478 663 ntTSL 5 BASIC2.3□□□□□ -2.04
LINC01558Q9Y6Z2 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC2.3□□□□□ -2.04
LINC01558Q9Y6Z2 IGHVIII-38-1-201ENST00000521454 282 ntBASIC2.3□□□□□ -2.04
LINC01558Q9Y6Z2 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC2.3□□□□□ -2.04
LINC01558Q9Y6Z2 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC2.3□□□□□ -2.04
LINC01558Q9Y6Z2 AC106785.3-201ENST00000564064 847 ntBASIC2.3□□□□□ -2.04
LINC01558Q9Y6Z2 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC2.3□□□□□ -2.04
LINC01558Q9Y6Z2 AC016180.1-201ENST00000567945 403 ntBASIC2.3□□□□□ -2.04
LINC01558Q9Y6Z2 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC2.3□□□□□ -2.04
LINC01558Q9Y6Z2 RPL23AP97-201ENST00000568955 471 ntBASIC2.3□□□□□ -2.04
LINC01558Q9Y6Z2 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC2.3□□□□□ -2.04
LINC01558Q9Y6Z2 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC2.3□□□□□ -2.04
LINC01558Q9Y6Z2 AF001548.1-201ENST00000577048 550 ntTSL 4 BASIC2.3□□□□□ -2.04
LINC01558Q9Y6Z2 AC024614.1-201ENST00000577546 307 ntBASIC2.3□□□□□ -2.04
LINC01558Q9Y6Z2 AC091027.2-201ENST00000578030 179 ntTSL 5 BASIC2.3□□□□□ -2.04
LINC01558Q9Y6Z2 AC011840.3-201ENST00000579378 280 ntTSL 3 BASIC2.3□□□□□ -2.04
LINC01558Q9Y6Z2 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC2.3□□□□□ -2.04
LINC01558Q9Y6Z2 AP001120.4-201ENST00000590231 108 ntBASIC2.3□□□□□ -2.04
LINC01558Q9Y6Z2 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC2.3□□□□□ -2.04
LINC01558Q9Y6Z2 AL031429.2-201ENST00000602605 649 ntBASIC2.3□□□□□ -2.04
LINC01558Q9Y6Z2 AC211469.1-201ENST00000604263 394 ntBASIC2.3□□□□□ -2.04
LINC01558Q9Y6Z2 AL365503.1-201ENST00000605247 905 ntBASIC2.3□□□□□ -2.04
LINC01558Q9Y6Z2 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC2.3□□□□□ -2.04
LINC01558Q9Y6Z2 AC092681.3-201ENST00000609463 678 ntBASIC2.3□□□□□ -2.04
LINC01558Q9Y6Z2 AL627230.1-201ENST00000613077 211 ntBASIC2.3□□□□□ -2.04
LINC01558Q9Y6Z2 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
LINC01558Q9Y6Z2 AC019278.1-201ENST00000623516 479 ntBASIC2.3□□□□□ -2.04
LINC01558Q9Y6Z2 AC021106.3-201ENST00000623925 531 ntBASIC2.3□□□□□ -2.04
LINC01558Q9Y6Z2 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC2.3□□□□□ -2.04
LINC01558Q9Y6Z2 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
LINC01558Q9Y6Z2 MFSD4BP1-201ENST00000513330 1552 ntBASIC2.3□□□□□ -2.04
LINC01558Q9Y6Z2 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC2.3□□□□□ -2.04
LINC01558Q9Y6Z2 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC2.3□□□□□ -2.04
LINC01558Q9Y6Z2 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
LINC01558Q9Y6Z2 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC2.3□□□□□ -2.04
LINC01558Q9Y6Z2 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC2.3□□□□□ -2.04
LINC01558Q9Y6Z2 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
LINC01558Q9Y6Z2 MRE11P1-201ENST00000464884 2127 ntBASIC2.29□□□□□ -2.04
LINC01558Q9Y6Z2 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC2.29□□□□□ -2.04
LINC01558Q9Y6Z2 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
LINC01558Q9Y6Z2 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC2.29□□□□□ -2.04
LINC01558Q9Y6Z2 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
LINC01558Q9Y6Z2 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
LINC01558Q9Y6Z2 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
LINC01558Q9Y6Z2 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
LINC01558Q9Y6Z2 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
LINC01558Q9Y6Z2 RNU1-5P-201ENST00000362684 144 ntBASIC2.29□□□□□ -2.04
LINC01558Q9Y6Z2 RNA5SP500-201ENST00000364486 119 ntBASIC2.29□□□□□ -2.04
LINC01558Q9Y6Z2 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC2.29□□□□□ -2.04
LINC01558Q9Y6Z2 RNA5SP332-201ENST00000391063 115 ntBASIC2.29□□□□□ -2.04
LINC01558Q9Y6Z2 RNA5SP203-201ENST00000410451 136 ntBASIC2.29□□□□□ -2.04
LINC01558Q9Y6Z2 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC2.29□□□□□ -2.04
LINC01558Q9Y6Z2 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC2.29□□□□□ -2.04
LINC01558Q9Y6Z2 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC2.29□□□□□ -2.04
LINC01558Q9Y6Z2 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC2.29□□□□□ -2.04
LINC01558Q9Y6Z2 PPP2R2DP1-201ENST00000420526 637 ntBASIC2.29□□□□□ -2.04
LINC01558Q9Y6Z2 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC2.29□□□□□ -2.04
LINC01558Q9Y6Z2 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC2.29□□□□□ -2.04
LINC01558Q9Y6Z2 GAPDHP37-201ENST00000442317 968 ntBASIC2.29□□□□□ -2.04
LINC01558Q9Y6Z2 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
LINC01558Q9Y6Z2 AL133215.1-201ENST00000447344 342 ntTSL 3 BASIC2.29□□□□□ -2.04
LINC01558Q9Y6Z2 LRRC37A14P-201ENST00000452297 462 ntBASIC2.29□□□□□ -2.04
LINC01558Q9Y6Z2 DDX39BP2-208ENST00000453923 258 ntBASIC2.29□□□□□ -2.04
LINC01558Q9Y6Z2 MTND6P32-201ENST00000457611 483 ntBASIC2.29□□□□□ -2.04
LINC01558Q9Y6Z2 AC011476.1-201ENST00000466725 307 ntBASIC2.29□□□□□ -2.04
LINC01558Q9Y6Z2 SNRPGP3-201ENST00000469405 227 ntBASIC2.29□□□□□ -2.04
LINC01558Q9Y6Z2 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC2.29□□□□□ -2.04
LINC01558Q9Y6Z2 RN7SL702P-201ENST00000488394 292 ntBASIC2.29□□□□□ -2.04
LINC01558Q9Y6Z2 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC2.29□□□□□ -2.04
LINC01558Q9Y6Z2 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC2.29□□□□□ -2.04
LINC01558Q9Y6Z2 AC080079.1-201ENST00000509326 1045 ntBASIC2.29□□□□□ -2.04
LINC01558Q9Y6Z2 AC108103.1-201ENST00000511286 446 ntBASIC2.29□□□□□ -2.04
LINC01558Q9Y6Z2 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC2.29□□□□□ -2.04
LINC01558Q9Y6Z2 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC2.29□□□□□ -2.04
LINC01558Q9Y6Z2 RN7SKP60-201ENST00000516985 239 ntBASIC2.29□□□□□ -2.04
LINC01558Q9Y6Z2 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC2.29□□□□□ -2.04
LINC01558Q9Y6Z2 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC2.29□□□□□ -2.04
LINC01558Q9Y6Z2 AC024405.1-201ENST00000532521 1042 ntBASIC2.29□□□□□ -2.04
LINC01558Q9Y6Z2 PCNAP4-201ENST00000532690 730 ntBASIC2.29□□□□□ -2.04
LINC01558Q9Y6Z2 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC2.29□□□□□ -2.04
LINC01558Q9Y6Z2 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
LINC01558Q9Y6Z2 AC023161.1-201ENST00000549532 420 ntTSL 3 BASIC2.29□□□□□ -2.04
LINC01558Q9Y6Z2 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC2.29□□□□□ -2.04
LINC01558Q9Y6Z2 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC2.29□□□□□ -2.04
LINC01558Q9Y6Z2 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC2.29□□□□□ -2.04
LINC01558Q9Y6Z2 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC2.29□□□□□ -2.04
LINC01558Q9Y6Z2 DNM1P47-201ENST00000560757 334 ntTSL 3 BASIC2.29□□□□□ -2.04
LINC01558Q9Y6Z2 AL133457.1-201ENST00000564251 987 ntBASIC2.29□□□□□ -2.04
LINC01558Q9Y6Z2 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC2.29□□□□□ -2.04
LINC01558Q9Y6Z2 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC2.29□□□□□ -2.04
LINC01558Q9Y6Z2 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC2.29□□□□□ -2.04
LINC01558Q9Y6Z2 AC009950.1-209ENST00000595586 777 ntTSL 5 BASIC2.29□□□□□ -2.04
LINC01558Q9Y6Z2 AC005154.6-201ENST00000598361 687 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
LINC01558Q9Y6Z2 EIF1P6-201ENST00000600054 334 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms