Protein–RNA interactions for Protein: Q9Y6Q1

CAPN6, Calpain-6, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN6Q9Y6Q1 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
CAPN6Q9Y6Q1 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CAPN6Q9Y6Q1 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CAPN6Q9Y6Q1 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CAPN6Q9Y6Q1 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
CAPN6Q9Y6Q1 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC6.39□□□□□ -1.39
CAPN6Q9Y6Q1 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CAPN6Q9Y6Q1 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.38□□□□□ -1.39
CAPN6Q9Y6Q1 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CAPN6Q9Y6Q1 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
CAPN6Q9Y6Q1 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CAPN6Q9Y6Q1 AC011933.2-201ENST00000578539 2790 ntBASIC6.38□□□□□ -1.39
CAPN6Q9Y6Q1 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC6.38□□□□□ -1.39
CAPN6Q9Y6Q1 Y_RNA.61-201ENST00000362835 102 ntBASIC6.38□□□□□ -1.39
CAPN6Q9Y6Q1 SNORA4.1-201ENST00000364263 144 ntBASIC6.38□□□□□ -1.39
CAPN6Q9Y6Q1 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
CAPN6Q9Y6Q1 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
CAPN6Q9Y6Q1 VIM2P-201ENST00000402383 1294 ntBASIC6.38□□□□□ -1.39
CAPN6Q9Y6Q1 MEAF6P1-201ENST00000416092 327 ntBASIC6.38□□□□□ -1.39
CAPN6Q9Y6Q1 AL354868.1-201ENST00000417077 482 ntBASIC6.38□□□□□ -1.39
CAPN6Q9Y6Q1 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC6.38□□□□□ -1.39
CAPN6Q9Y6Q1 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC6.38□□□□□ -1.39
CAPN6Q9Y6Q1 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC6.38□□□□□ -1.39
CAPN6Q9Y6Q1 GLRXP1-201ENST00000423261 334 ntBASIC6.38□□□□□ -1.39
CAPN6Q9Y6Q1 OR8F1P-201ENST00000425243 930 ntBASIC6.38□□□□□ -1.39
CAPN6Q9Y6Q1 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.38□□□□□ -1.39
CAPN6Q9Y6Q1 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CAPN6Q9Y6Q1 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC6.38□□□□□ -1.39
CAPN6Q9Y6Q1 HMGB1P31-201ENST00000437242 427 ntBASIC6.38□□□□□ -1.39
CAPN6Q9Y6Q1 MTCO3P18-201ENST00000440206 761 ntBASIC6.38□□□□□ -1.39
CAPN6Q9Y6Q1 AL662791.1-201ENST00000441992 928 ntBASIC6.38□□□□□ -1.39
CAPN6Q9Y6Q1 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.38□□□□□ -1.39
CAPN6Q9Y6Q1 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC6.38□□□□□ -1.39
CAPN6Q9Y6Q1 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC6.38□□□□□ -1.39
CAPN6Q9Y6Q1 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC6.38□□□□□ -1.39
CAPN6Q9Y6Q1 AC092001.1-201ENST00000453012 261 ntBASIC6.38□□□□□ -1.39
CAPN6Q9Y6Q1 RN7SL836P-201ENST00000476140 296 ntBASIC6.38□□□□□ -1.39
CAPN6Q9Y6Q1 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC6.38□□□□□ -1.39
CAPN6Q9Y6Q1 RPL34P33-201ENST00000486062 334 ntBASIC6.38□□□□□ -1.39
CAPN6Q9Y6Q1 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC6.38□□□□□ -1.39
CAPN6Q9Y6Q1 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC6.38□□□□□ -1.39
CAPN6Q9Y6Q1 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC6.38□□□□□ -1.39
CAPN6Q9Y6Q1 RNU6-314P-201ENST00000516574 104 ntBASIC6.38□□□□□ -1.39
CAPN6Q9Y6Q1 RNA5SP434-201ENST00000516647 121 ntBASIC6.38□□□□□ -1.39
CAPN6Q9Y6Q1 AC104383.1-201ENST00000530297 370 ntBASIC6.38□□□□□ -1.39
CAPN6Q9Y6Q1 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC6.38□□□□□ -1.39
CAPN6Q9Y6Q1 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC6.38□□□□□ -1.39
CAPN6Q9Y6Q1 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC6.38□□□□□ -1.39
CAPN6Q9Y6Q1 AC060780.2-201ENST00000589047 198 ntBASIC6.38□□□□□ -1.39
CAPN6Q9Y6Q1 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC6.38□□□□□ -1.39
CAPN6Q9Y6Q1 AC112220.3-201ENST00000605502 502 ntBASIC6.38□□□□□ -1.39
CAPN6Q9Y6Q1 SNORA74.4-201ENST00000607595 199 ntBASIC6.38□□□□□ -1.39
CAPN6Q9Y6Q1 AC091304.9-201ENST00000612091 226 ntBASIC6.38□□□□□ -1.39
CAPN6Q9Y6Q1 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
CAPN6Q9Y6Q1 AC012150.2-201ENST00000621300 544 ntBASIC6.38□□□□□ -1.39
CAPN6Q9Y6Q1 AC027506.1-201ENST00000621395 198 ntBASIC6.38□□□□□ -1.39
CAPN6Q9Y6Q1 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.38□□□□□ -1.39
CAPN6Q9Y6Q1 MTND1P37-201ENST00000636562 264 ntBASIC6.38□□□□□ -1.39
CAPN6Q9Y6Q1 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.38□□□□□ -1.39
CAPN6Q9Y6Q1 AC090181.3-201ENST00000624777 1514 ntBASIC6.38□□□□□ -1.39
CAPN6Q9Y6Q1 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.38□□□□□ -1.39
CAPN6Q9Y6Q1 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CAPN6Q9Y6Q1 MTND5P26-201ENST00000426018 1752 ntBASIC6.38□□□□□ -1.39
CAPN6Q9Y6Q1 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC6.38□□□□□ -1.39
CAPN6Q9Y6Q1 DLD-205ENST00000440410 1993 ntTSL 2 BASIC6.38□□□□□ -1.39
CAPN6Q9Y6Q1 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC6.38□□□□□ -1.39
CAPN6Q9Y6Q1 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
CAPN6Q9Y6Q1 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC6.38□□□□□ -1.39
CAPN6Q9Y6Q1 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
CAPN6Q9Y6Q1 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
CAPN6Q9Y6Q1 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CAPN6Q9Y6Q1 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
CAPN6Q9Y6Q1 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.37□□□□□ -1.39
CAPN6Q9Y6Q1 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
CAPN6Q9Y6Q1 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
CAPN6Q9Y6Q1 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.37□□□□□ -1.39
CAPN6Q9Y6Q1 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.37□□□□□ -1.39
CAPN6Q9Y6Q1 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
CAPN6Q9Y6Q1 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
CAPN6Q9Y6Q1 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CAPN6Q9Y6Q1 CDY11P-201ENST00000447168 1651 ntBASIC6.37□□□□□ -1.39
CAPN6Q9Y6Q1 TEX21P-201ENST00000447107 1476 ntBASIC6.37□□□□□ -1.39
CAPN6Q9Y6Q1 AL354685.2-201ENST00000448218 1447 ntBASIC6.37□□□□□ -1.39
CAPN6Q9Y6Q1 EED-206ENST00000527888 1422 ntTSL 2 BASIC6.37□□□□□ -1.39
CAPN6Q9Y6Q1 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
CAPN6Q9Y6Q1 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CAPN6Q9Y6Q1 RN7SKP128-201ENST00000364270 303 ntBASIC6.37□□□□□ -1.39
CAPN6Q9Y6Q1 Y_RNA.311-201ENST00000365068 96 ntBASIC6.37□□□□□ -1.39
CAPN6Q9Y6Q1 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CAPN6Q9Y6Q1 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CAPN6Q9Y6Q1 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
CAPN6Q9Y6Q1 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CAPN6Q9Y6Q1 AC002524.1-201ENST00000411687 547 ntBASIC6.37□□□□□ -1.39
CAPN6Q9Y6Q1 OR51A5P-201ENST00000415429 942 ntBASIC6.37□□□□□ -1.39
CAPN6Q9Y6Q1 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.37□□□□□ -1.39
CAPN6Q9Y6Q1 MTATP6P27-201ENST00000416987 621 ntBASIC6.37□□□□□ -1.39
CAPN6Q9Y6Q1 RPA2P2-201ENST00000419698 796 ntBASIC6.37□□□□□ -1.39
CAPN6Q9Y6Q1 AC009480.2-201ENST00000422916 432 ntBASIC6.37□□□□□ -1.39
CAPN6Q9Y6Q1 AL139158.1-201ENST00000424719 340 ntBASIC6.37□□□□□ -1.39
CAPN6Q9Y6Q1 HNRNPA1P29-201ENST00000426409 879 ntBASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms