Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
VPS9D1Q9Y2B5 TRBV30-201ENST00000417977 447 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
VPS9D1Q9Y2B5 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC7.68□□□□□ -1.18
VPS9D1Q9Y2B5 AC007679.2-201ENST00000422116 781 ntTSL 3 BASIC7.68□□□□□ -1.18
VPS9D1Q9Y2B5 AL355607.1-201ENST00000427745 295 ntTSL 3 BASIC7.68□□□□□ -1.18
VPS9D1Q9Y2B5 FTH1P20-201ENST00000434913 548 ntBASIC7.68□□□□□ -1.18
VPS9D1Q9Y2B5 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC7.68□□□□□ -1.18
VPS9D1Q9Y2B5 AL512882.1-201ENST00000436086 832 ntBASIC7.68□□□□□ -1.18
VPS9D1Q9Y2B5 FTH1P25-201ENST00000447665 469 ntBASIC7.68□□□□□ -1.18
VPS9D1Q9Y2B5 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
VPS9D1Q9Y2B5 CDKN2AIPNLP1-201ENST00000460287 302 ntBASIC7.68□□□□□ -1.18
VPS9D1Q9Y2B5 GGTA1P-204ENST00000488429 1104 ntBASIC7.68□□□□□ -1.18
VPS9D1Q9Y2B5 AC024451.1-201ENST00000508013 779 ntBASIC7.68□□□□□ -1.18
VPS9D1Q9Y2B5 AC138517.1-201ENST00000515724 568 ntBASIC7.68□□□□□ -1.18
VPS9D1Q9Y2B5 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC7.68□□□□□ -1.18
VPS9D1Q9Y2B5 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC7.68□□□□□ -1.18
VPS9D1Q9Y2B5 AP004833.3-201ENST00000531893 322 ntBASIC7.68□□□□□ -1.18
VPS9D1Q9Y2B5 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
VPS9D1Q9Y2B5 AC055736.1-201ENST00000548135 629 ntTSL 3 BASIC7.68□□□□□ -1.18
VPS9D1Q9Y2B5 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
VPS9D1Q9Y2B5 RPL21P7-201ENST00000557463 483 ntBASIC7.68□□□□□ -1.18
VPS9D1Q9Y2B5 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
VPS9D1Q9Y2B5 AC009171.1-201ENST00000572673 266 ntBASIC7.68□□□□□ -1.18
VPS9D1Q9Y2B5 AC027796.5-201ENST00000573568 560 ntTSL 5 BASIC7.68□□□□□ -1.18
VPS9D1Q9Y2B5 AC008770.1-209ENST00000591898 356 ntTSL 3 BASIC7.68□□□□□ -1.18
VPS9D1Q9Y2B5 AC003002.3-201ENST00000597410 521 ntAPPRIS P1 TSL 3 BASIC7.68□□□□□ -1.18
VPS9D1Q9Y2B5 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC7.68□□□□□ -1.18
VPS9D1Q9Y2B5 AL512329.2-201ENST00000607350 548 ntBASIC7.68□□□□□ -1.18
VPS9D1Q9Y2B5 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC7.68□□□□□ -1.18
VPS9D1Q9Y2B5 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
VPS9D1Q9Y2B5 ADGRF2-204ENST00000507065 3043 ntTSL 5 BASIC7.68□□□□□ -1.18
VPS9D1Q9Y2B5 TTLL5-207ENST00000554510 2624 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
VPS9D1Q9Y2B5 RNF219-201ENST00000282003 3529 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
VPS9D1Q9Y2B5 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
VPS9D1Q9Y2B5 AC090017.1-201ENST00000548612 1779 ntBASIC7.68□□□□□ -1.18
VPS9D1Q9Y2B5 CDK15-203ENST00000434439 2240 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
VPS9D1Q9Y2B5 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC7.68□□□□□ -1.18
VPS9D1Q9Y2B5 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
VPS9D1Q9Y2B5 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
VPS9D1Q9Y2B5 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC7.68□□□□□ -1.18
VPS9D1Q9Y2B5 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
VPS9D1Q9Y2B5 OR2A20P-201ENST00000479887 2913 ntBASIC7.68□□□□□ -1.18
VPS9D1Q9Y2B5 FAM13A-AS1-202ENST00000511543 2453 ntTSL 2 BASIC7.68□□□□□ -1.18
VPS9D1Q9Y2B5 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
VPS9D1Q9Y2B5 NAT10-201ENST00000257829 4002 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
VPS9D1Q9Y2B5 TPD52-202ENST00000379097 2563 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
VPS9D1Q9Y2B5 FCGR3A-201ENST00000367967 2086 ntAPPRIS P1 TSL 3 BASIC7.67□□□□□ -1.18
VPS9D1Q9Y2B5 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
VPS9D1Q9Y2B5 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC7.67□□□□□ -1.18
VPS9D1Q9Y2B5 HEPACAM2-202ENST00000394468 2148 ntAPPRIS ALT2 TSL 2 BASIC7.67□□□□□ -1.18
VPS9D1Q9Y2B5 WDCP-202ENST00000406895 3700 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
VPS9D1Q9Y2B5 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC7.67□□□□□ -1.18
VPS9D1Q9Y2B5 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
VPS9D1Q9Y2B5 GRIA4-206ENST00000525187 2822 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
VPS9D1Q9Y2B5 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC7.67□□□□□ -1.18
VPS9D1Q9Y2B5 OR52K3P-202ENST00000641797 1729 ntBASIC7.67□□□□□ -1.18
VPS9D1Q9Y2B5 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
VPS9D1Q9Y2B5 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
VPS9D1Q9Y2B5 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
VPS9D1Q9Y2B5 CCT5-201ENST00000280326 3675 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
VPS9D1Q9Y2B5 TDRD3-209ENST00000621840 2497 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
VPS9D1Q9Y2B5 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
VPS9D1Q9Y2B5 PRLR-202ENST00000310101 1297 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
VPS9D1Q9Y2B5 Y_RNA.106-201ENST00000363189 100 ntBASIC7.67□□□□□ -1.18
VPS9D1Q9Y2B5 Y_RNA.485-201ENST00000384395 102 ntBASIC7.67□□□□□ -1.18
VPS9D1Q9Y2B5 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
VPS9D1Q9Y2B5 RNU6-903P-201ENST00000391270 109 ntBASIC7.67□□□□□ -1.18
VPS9D1Q9Y2B5 PCNPP3-201ENST00000393579 471 ntBASIC7.67□□□□□ -1.18
VPS9D1Q9Y2B5 PPIAP9-201ENST00000403866 498 ntBASIC7.67□□□□□ -1.18
VPS9D1Q9Y2B5 MIR1303-201ENST00000408625 86 ntBASIC7.67□□□□□ -1.18
VPS9D1Q9Y2B5 UNC50-203ENST00000409347 1276 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
VPS9D1Q9Y2B5 RNU2-36P-201ENST00000410361 191 ntBASIC7.67□□□□□ -1.18
VPS9D1Q9Y2B5 UBE2FP1-201ENST00000416536 447 ntBASIC7.67□□□□□ -1.18
VPS9D1Q9Y2B5 LINC01384-201ENST00000422494 659 ntTSL 3 BASIC7.67□□□□□ -1.18
VPS9D1Q9Y2B5 AC092832.1-201ENST00000422934 400 ntBASIC7.67□□□□□ -1.18
VPS9D1Q9Y2B5 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC7.67□□□□□ -1.18
VPS9D1Q9Y2B5 AC099344.1-201ENST00000433548 492 ntBASIC7.67□□□□□ -1.18
VPS9D1Q9Y2B5 AQP4-203ENST00000440832 1169 ntTSL 5 BASIC7.67□□□□□ -1.18
VPS9D1Q9Y2B5 AC074286.1-202ENST00000441205 567 ntTSL 5 BASIC7.67□□□□□ -1.18
VPS9D1Q9Y2B5 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC7.67□□□□□ -1.18
VPS9D1Q9Y2B5 RPL31P44-201ENST00000447680 377 ntBASIC7.67□□□□□ -1.18
VPS9D1Q9Y2B5 RN7SL55P-201ENST00000464534 297 ntBASIC7.67□□□□□ -1.18
VPS9D1Q9Y2B5 RN7SL12P-201ENST00000473849 290 ntBASIC7.67□□□□□ -1.18
VPS9D1Q9Y2B5 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC7.67□□□□□ -1.18
VPS9D1Q9Y2B5 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC7.67□□□□□ -1.18
VPS9D1Q9Y2B5 RNU6-1038P-201ENST00000516516 104 ntBASIC7.67□□□□□ -1.18
VPS9D1Q9Y2B5 IGKV2D-23-201ENST00000518179 286 ntBASIC7.67□□□□□ -1.18
VPS9D1Q9Y2B5 AP001922.4-201ENST00000526967 290 ntBASIC7.67□□□□□ -1.18
VPS9D1Q9Y2B5 AL137161.1-201ENST00000532231 390 ntBASIC7.67□□□□□ -1.18
VPS9D1Q9Y2B5 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC7.67□□□□□ -1.18
VPS9D1Q9Y2B5 AC090312.1-201ENST00000580637 348 ntBASIC7.67□□□□□ -1.18
VPS9D1Q9Y2B5 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC7.67□□□□□ -1.18
VPS9D1Q9Y2B5 AC023043.2-201ENST00000589678 1026 ntBASIC7.67□□□□□ -1.18
VPS9D1Q9Y2B5 GLUD1P4-201ENST00000590914 418 ntBASIC7.67□□□□□ -1.18
VPS9D1Q9Y2B5 AC018737.1-201ENST00000603900 204 ntBASIC7.67□□□□□ -1.18
VPS9D1Q9Y2B5 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC7.67□□□□□ -1.18
VPS9D1Q9Y2B5 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC7.67□□□□□ -1.18
VPS9D1Q9Y2B5 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
VPS9D1Q9Y2B5 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
VPS9D1Q9Y2B5 AFP-201ENST00000226359 1914 ntTSL 5 BASIC7.67□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms