Protein–RNA interactions for Protein: Q9UN37

VPS4A, Vacuolar protein sorting-associated protein 4A, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4AQ9UN37 AC024023.1-201ENST00000624530 922 ntBASIC5.34□□□□□ -1.55
VPS4AQ9UN37 AL390318.1-201ENST00000624564 687 ntBASIC5.34□□□□□ -1.55
VPS4AQ9UN37 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.34□□□□□ -1.55
VPS4AQ9UN37 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.34□□□□□ -1.55
VPS4AQ9UN37 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.34□□□□□ -1.55
VPS4AQ9UN37 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
VPS4AQ9UN37 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.34□□□□□ -1.56
VPS4AQ9UN37 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
VPS4AQ9UN37 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
VPS4AQ9UN37 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
VPS4AQ9UN37 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
VPS4AQ9UN37 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
VPS4AQ9UN37 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
VPS4AQ9UN37 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
VPS4AQ9UN37 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
VPS4AQ9UN37 MTCO1P18-201ENST00000455518 1419 ntBASIC5.33□□□□□ -1.56
VPS4AQ9UN37 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.33□□□□□ -1.56
VPS4AQ9UN37 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
VPS4AQ9UN37 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.33□□□□□ -1.56
VPS4AQ9UN37 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
VPS4AQ9UN37 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
VPS4AQ9UN37 U6.112-201ENST00000384129 70 ntBASIC5.33□□□□□ -1.56
VPS4AQ9UN37 RNU6-729P-201ENST00000384399 107 ntBASIC5.33□□□□□ -1.56
VPS4AQ9UN37 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
VPS4AQ9UN37 AC009804.1-201ENST00000400949 179 ntBASIC5.33□□□□□ -1.56
VPS4AQ9UN37 SETP15-201ENST00000412724 337 ntBASIC5.33□□□□□ -1.56
VPS4AQ9UN37 AL596448.1-201ENST00000415024 392 ntBASIC5.33□□□□□ -1.56
VPS4AQ9UN37 RPL23AP27-201ENST00000415161 451 ntBASIC5.33□□□□□ -1.56
VPS4AQ9UN37 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC5.33□□□□□ -1.56
VPS4AQ9UN37 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC5.33□□□□□ -1.56
VPS4AQ9UN37 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.33□□□□□ -1.56
VPS4AQ9UN37 MTCYBP31-201ENST00000438855 1122 ntBASIC5.33□□□□□ -1.56
VPS4AQ9UN37 CR769776.1-201ENST00000441254 787 ntBASIC5.33□□□□□ -1.56
VPS4AQ9UN37 AC005297.1-201ENST00000444765 862 ntBASIC5.33□□□□□ -1.56
VPS4AQ9UN37 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.33□□□□□ -1.56
VPS4AQ9UN37 AC091685.2-201ENST00000454924 864 ntBASIC5.33□□□□□ -1.56
VPS4AQ9UN37 AC011225.1-201ENST00000457751 369 ntBASIC5.33□□□□□ -1.56
VPS4AQ9UN37 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.33□□□□□ -1.56
VPS4AQ9UN37 PSMC1P13-201ENST00000458195 985 ntBASIC5.33□□□□□ -1.56
VPS4AQ9UN37 AC100832.1-201ENST00000471945 383 ntBASIC5.33□□□□□ -1.56
VPS4AQ9UN37 RPL5P22-201ENST00000480199 884 ntBASIC5.33□□□□□ -1.56
VPS4AQ9UN37 RPL32P33-201ENST00000487023 394 ntBASIC5.33□□□□□ -1.56
VPS4AQ9UN37 AC073610.1-201ENST00000489971 396 ntBASIC5.33□□□□□ -1.56
VPS4AQ9UN37 RN7SL547P-201ENST00000490793 290 ntBASIC5.33□□□□□ -1.56
VPS4AQ9UN37 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC5.33□□□□□ -1.56
VPS4AQ9UN37 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
VPS4AQ9UN37 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.33□□□□□ -1.56
VPS4AQ9UN37 RN7SKP253-201ENST00000516424 309 ntBASIC5.33□□□□□ -1.56
VPS4AQ9UN37 SCARNA6.1-201ENST00000516989 238 ntBASIC5.33□□□□□ -1.56
VPS4AQ9UN37 AC021678.3-201ENST00000517893 476 ntBASIC5.33□□□□□ -1.56
VPS4AQ9UN37 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC5.33□□□□□ -1.56
VPS4AQ9UN37 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC5.33□□□□□ -1.56
VPS4AQ9UN37 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC5.33□□□□□ -1.56
VPS4AQ9UN37 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC5.33□□□□□ -1.56
VPS4AQ9UN37 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.33□□□□□ -1.56
VPS4AQ9UN37 CCDC58P3-201ENST00000590792 430 ntBASIC5.33□□□□□ -1.56
VPS4AQ9UN37 GAS5-AS1-201ENST00000602767 694 ntBASIC5.33□□□□□ -1.56
VPS4AQ9UN37 AC104785.1-201ENST00000603220 588 ntBASIC5.33□□□□□ -1.56
VPS4AQ9UN37 Z82195.1-201ENST00000604558 398 ntBASIC5.33□□□□□ -1.56
VPS4AQ9UN37 PART1_2.1-201ENST00000612397 250 ntBASIC5.33□□□□□ -1.56
VPS4AQ9UN37 AC009039.2-201ENST00000624524 529 ntBASIC5.33□□□□□ -1.56
VPS4AQ9UN37 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.33□□□□□ -1.56
VPS4AQ9UN37 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
VPS4AQ9UN37 SMG1P7-201ENST00000565246 2704 ntBASIC5.33□□□□□ -1.56
VPS4AQ9UN37 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.33□□□□□ -1.56
VPS4AQ9UN37 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.33□□□□□ -1.56
VPS4AQ9UN37 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
VPS4AQ9UN37 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.33□□□□□ -1.56
VPS4AQ9UN37 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
VPS4AQ9UN37 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.33□□□□□ -1.56
VPS4AQ9UN37 AC097461.1-201ENST00000568928 2821 ntBASIC5.33□□□□□ -1.56
VPS4AQ9UN37 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
VPS4AQ9UN37 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
VPS4AQ9UN37 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.32□□□□□ -1.56
VPS4AQ9UN37 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
VPS4AQ9UN37 PWAR1-201ENST00000624188 2414 ntBASIC5.32□□□□□ -1.56
VPS4AQ9UN37 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
VPS4AQ9UN37 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.32□□□□□ -1.56
VPS4AQ9UN37 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.32□□□□□ -1.56
VPS4AQ9UN37 AP001029.2-203ENST00000589795 4910 ntBASIC5.32□□□□□ -1.56
VPS4AQ9UN37 AC103591.2-201ENST00000265259 766 ntBASIC5.32□□□□□ -1.56
VPS4AQ9UN37 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
VPS4AQ9UN37 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
VPS4AQ9UN37 AL159987.1-201ENST00000347911 293 ntBASIC5.32□□□□□ -1.56
VPS4AQ9UN37 RNA5SP319-201ENST00000362768 119 ntBASIC5.32□□□□□ -1.56
VPS4AQ9UN37 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
VPS4AQ9UN37 RNU4-31P-201ENST00000384211 141 ntBASIC5.32□□□□□ -1.56
VPS4AQ9UN37 AC119751.3-201ENST00000399720 670 ntBASIC5.32□□□□□ -1.56
VPS4AQ9UN37 RN7SKP97-201ENST00000410966 333 ntBASIC5.32□□□□□ -1.56
VPS4AQ9UN37 AC092638.1-201ENST00000411966 1275 ntBASIC5.32□□□□□ -1.56
VPS4AQ9UN37 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC5.32□□□□□ -1.56
VPS4AQ9UN37 RPS6P23-201ENST00000413224 722 ntBASIC5.32□□□□□ -1.56
VPS4AQ9UN37 AL139128.1-201ENST00000413921 941 ntBASIC5.32□□□□□ -1.56
VPS4AQ9UN37 AC079809.1-201ENST00000415468 276 ntBASIC5.32□□□□□ -1.56
VPS4AQ9UN37 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
VPS4AQ9UN37 AC005005.2-201ENST00000420779 380 ntBASIC5.32□□□□□ -1.56
VPS4AQ9UN37 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC5.32□□□□□ -1.56
VPS4AQ9UN37 AL139148.1-201ENST00000427122 680 ntBASIC5.32□□□□□ -1.56
VPS4AQ9UN37 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC5.32□□□□□ -1.56
VPS4AQ9UN37 PTGES3P1-201ENST00000439531 483 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 391.3 ms