Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.75□□□□□ -1.49
SCN11AQ9UI33 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.75□□□□□ -1.49
SCN11AQ9UI33 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.75□□□□□ -1.49
SCN11AQ9UI33 SNORA31.9-201ENST00000516429 84 ntBASIC5.75□□□□□ -1.49
SCN11AQ9UI33 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.75□□□□□ -1.49
SCN11AQ9UI33 AC034105.4-201ENST00000568304 277 ntBASIC5.75□□□□□ -1.49
SCN11AQ9UI33 ADAD1P2-201ENST00000588476 646 ntBASIC5.75□□□□□ -1.49
SCN11AQ9UI33 AC010201.1-201ENST00000605051 540 ntBASIC5.75□□□□□ -1.49
SCN11AQ9UI33 RNA5SP196-201ENST00000625967 102 ntBASIC5.75□□□□□ -1.49
SCN11AQ9UI33 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
SCN11AQ9UI33 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SCN11AQ9UI33 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
SCN11AQ9UI33 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SCN11AQ9UI33 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC5.74□□□□□ -1.49
SCN11AQ9UI33 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.74□□□□□ -1.49
SCN11AQ9UI33 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SCN11AQ9UI33 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.74□□□□□ -1.49
SCN11AQ9UI33 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SCN11AQ9UI33 RNA5SP307-201ENST00000362863 116 ntBASIC5.74□□□□□ -1.49
SCN11AQ9UI33 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SCN11AQ9UI33 RPS26P8-201ENST00000393490 348 ntBASIC5.74□□□□□ -1.49
SCN11AQ9UI33 AC009237.10-201ENST00000414112 510 ntBASIC5.74□□□□□ -1.49
SCN11AQ9UI33 AC009237.5-201ENST00000414271 501 ntBASIC5.74□□□□□ -1.49
SCN11AQ9UI33 AC012671.1-201ENST00000451912 203 ntBASIC5.74□□□□□ -1.49
SCN11AQ9UI33 AC093815.1-201ENST00000508637 280 ntBASIC5.74□□□□□ -1.49
SCN11AQ9UI33 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SCN11AQ9UI33 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC5.74□□□□□ -1.49
SCN11AQ9UI33 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SCN11AQ9UI33 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SCN11AQ9UI33 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.74□□□□□ -1.49
SCN11AQ9UI33 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC5.74□□□□□ -1.49
SCN11AQ9UI33 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.74□□□□□ -1.49
SCN11AQ9UI33 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.74□□□□□ -1.49
SCN11AQ9UI33 AL136164.3-201ENST00000624429 3978 ntBASIC5.74□□□□□ -1.49
SCN11AQ9UI33 AC090506.2-201ENST00000624521 419 ntBASIC5.74□□□□□ -1.49
SCN11AQ9UI33 LINC01808-202ENST00000641680 1116 ntBASIC5.74□□□□□ -1.49
SCN11AQ9UI33 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC5.74□□□□□ -1.49
SCN11AQ9UI33 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.74□□□□□ -1.49
SCN11AQ9UI33 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.74□□□□□ -1.49
SCN11AQ9UI33 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SCN11AQ9UI33 AL672167.1-204ENST00000641875 3017 ntBASIC5.73□□□□□ -1.49
SCN11AQ9UI33 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.73□□□□□ -1.49
SCN11AQ9UI33 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SCN11AQ9UI33 AL132765.1-201ENST00000434165 553 ntBASIC5.73□□□□□ -1.49
SCN11AQ9UI33 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC5.73□□□□□ -1.49
SCN11AQ9UI33 PPP1R11P1-201ENST00000486095 376 ntBASIC5.73□□□□□ -1.49
SCN11AQ9UI33 AP002812.1-201ENST00000495378 474 ntBASIC5.73□□□□□ -1.49
SCN11AQ9UI33 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
SCN11AQ9UI33 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.73□□□□□ -1.49
SCN11AQ9UI33 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC5.73□□□□□ -1.49
SCN11AQ9UI33 ARL6IP1P1-201ENST00000545836 610 ntBASIC5.73□□□□□ -1.49
SCN11AQ9UI33 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC5.73□□□□□ -1.49
SCN11AQ9UI33 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
SCN11AQ9UI33 AC112200.1-201ENST00000625015 234 ntBASIC5.73□□□□□ -1.49
SCN11AQ9UI33 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SCN11AQ9UI33 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
SCN11AQ9UI33 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SCN11AQ9UI33 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.73□□□□□ -1.49
SCN11AQ9UI33 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
SCN11AQ9UI33 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.73□□□□□ -1.49
SCN11AQ9UI33 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
SCN11AQ9UI33 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SCN11AQ9UI33 RN7SKP235-201ENST00000410662 305 ntBASIC5.72□□□□□ -1.49
SCN11AQ9UI33 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC5.72□□□□□ -1.49
SCN11AQ9UI33 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SCN11AQ9UI33 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC5.72□□□□□ -1.49
SCN11AQ9UI33 MRPS21P3-201ENST00000436696 262 ntBASIC5.72□□□□□ -1.49
SCN11AQ9UI33 AC004938.1-201ENST00000438468 308 ntBASIC5.72□□□□□ -1.49
SCN11AQ9UI33 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC5.72□□□□□ -1.49
SCN11AQ9UI33 TPT1P3-201ENST00000492841 512 ntBASIC5.72□□□□□ -1.49
SCN11AQ9UI33 AP002360.3-201ENST00000607673 710 ntBASIC5.72□□□□□ -1.49
SCN11AQ9UI33 MIR6867-201ENST00000610636 67 ntBASIC5.72□□□□□ -1.49
SCN11AQ9UI33 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
SCN11AQ9UI33 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SCN11AQ9UI33 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SCN11AQ9UI33 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC5.72□□□□□ -1.49
SCN11AQ9UI33 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
SCN11AQ9UI33 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
SCN11AQ9UI33 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
SCN11AQ9UI33 AC139769.1-204ENST00000472297 1931 ntBASIC5.72□□□□□ -1.49
SCN11AQ9UI33 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SCN11AQ9UI33 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.72□□□□□ -1.49
SCN11AQ9UI33 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SCN11AQ9UI33 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
SCN11AQ9UI33 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC5.72□□□□□ -1.49
SCN11AQ9UI33 RNA5SP387-201ENST00000364226 106 ntBASIC5.72□□□□□ -1.49
SCN11AQ9UI33 AL445189.1-201ENST00000405722 338 ntBASIC5.72□□□□□ -1.49
SCN11AQ9UI33 HYKK-202ENST00000408962 847 ntTSL 5 BASIC5.72□□□□□ -1.49
SCN11AQ9UI33 RN7SKP167-201ENST00000411047 285 ntBASIC5.72□□□□□ -1.49
SCN11AQ9UI33 RPS20P14-201ENST00000412545 360 ntBASIC5.72□□□□□ -1.49
SCN11AQ9UI33 EIF4A1P1-201ENST00000420241 934 ntBASIC5.72□□□□□ -1.49
SCN11AQ9UI33 HSFY6P-201ENST00000445573 403 ntBASIC5.72□□□□□ -1.49
SCN11AQ9UI33 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.72□□□□□ -1.49
SCN11AQ9UI33 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SCN11AQ9UI33 HYKK-203ENST00000563233 734 ntTSL 2 BASIC5.72□□□□□ -1.49
SCN11AQ9UI33 AC090948.2-201ENST00000607363 564 ntBASIC5.72□□□□□ -1.49
SCN11AQ9UI33 AC008013.2-202ENST00000637965 364 ntBASIC5.72□□□□□ -1.49
SCN11AQ9UI33 FP325313.1-201ENST00000638228 703 ntBASIC5.72□□□□□ -1.49
SCN11AQ9UI33 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SCN11AQ9UI33 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms