Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.11□□□□□ -1.75
KIAA1549Q9HCM3 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.11□□□□□ -1.75
KIAA1549Q9HCM3 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC4.11□□□□□ -1.75
KIAA1549Q9HCM3 AC069061.3-201ENST00000582254 823 ntBASIC4.11□□□□□ -1.75
KIAA1549Q9HCM3 MIR3939-201ENST00000582614 106 ntBASIC4.11□□□□□ -1.75
KIAA1549Q9HCM3 AC005034.4-201ENST00000603612 899 ntBASIC4.11□□□□□ -1.75
KIAA1549Q9HCM3 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
KIAA1549Q9HCM3 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
KIAA1549Q9HCM3 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
KIAA1549Q9HCM3 AC090017.1-201ENST00000548612 1779 ntBASIC4.1□□□□□ -1.75
KIAA1549Q9HCM3 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
KIAA1549Q9HCM3 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
KIAA1549Q9HCM3 GVINP1-202ENST00000531871 7271 ntBASIC4.1□□□□□ -1.75
KIAA1549Q9HCM3 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
KIAA1549Q9HCM3 AC019072.1-201ENST00000604535 1551 ntBASIC4.1□□□□□ -1.75
KIAA1549Q9HCM3 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
KIAA1549Q9HCM3 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.1□□□□□ -1.75
KIAA1549Q9HCM3 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.1□□□□□ -1.75
KIAA1549Q9HCM3 SALL4P2-201ENST00000423288 2910 ntBASIC4.1□□□□□ -1.75
KIAA1549Q9HCM3 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
KIAA1549Q9HCM3 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
KIAA1549Q9HCM3 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.1□□□□□ -1.75
KIAA1549Q9HCM3 AC004975.1-201ENST00000428733 208 ntBASIC4.1□□□□□ -1.75
KIAA1549Q9HCM3 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.1□□□□□ -1.75
KIAA1549Q9HCM3 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.1□□□□□ -1.75
KIAA1549Q9HCM3 Z95152.1-201ENST00000453556 656 ntBASIC4.1□□□□□ -1.75
KIAA1549Q9HCM3 PPIAP21-201ENST00000464473 501 ntBASIC4.1□□□□□ -1.75
KIAA1549Q9HCM3 AC090142.1-201ENST00000465776 462 ntBASIC4.1□□□□□ -1.75
KIAA1549Q9HCM3 MTND4LP2-201ENST00000502312 285 ntBASIC4.1□□□□□ -1.75
KIAA1549Q9HCM3 PRELID3BP5-201ENST00000508612 460 ntBASIC4.1□□□□□ -1.75
KIAA1549Q9HCM3 MIR4715-201ENST00000584117 79 ntBASIC4.1□□□□□ -1.75
KIAA1549Q9HCM3 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.1□□□□□ -1.75
KIAA1549Q9HCM3 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC4.1□□□□□ -1.75
KIAA1549Q9HCM3 MIR8069-1-201ENST00000616627 86 ntBASIC4.1□□□□□ -1.75
KIAA1549Q9HCM3 MIR8069-2-201ENST00000621412 86 ntBASIC4.1□□□□□ -1.75
KIAA1549Q9HCM3 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
KIAA1549Q9HCM3 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
KIAA1549Q9HCM3 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
KIAA1549Q9HCM3 AP001642.1-201ENST00000624727 2117 ntBASIC4.1□□□□□ -1.75
KIAA1549Q9HCM3 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.1□□□□□ -1.75
KIAA1549Q9HCM3 AC120338.1-201ENST00000625074 1541 ntBASIC4.1□□□□□ -1.75
KIAA1549Q9HCM3 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
KIAA1549Q9HCM3 AL356317.1-201ENST00000396110 1436 ntBASIC4.1□□□□□ -1.75
KIAA1549Q9HCM3 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.1□□□□□ -1.75
KIAA1549Q9HCM3 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC4.09□□□□□ -1.75
KIAA1549Q9HCM3 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
KIAA1549Q9HCM3 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
KIAA1549Q9HCM3 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
KIAA1549Q9HCM3 RNA5SP307-201ENST00000362863 116 ntBASIC4.09□□□□□ -1.75
KIAA1549Q9HCM3 EI24P3-201ENST00000399046 1062 ntBASIC4.09□□□□□ -1.75
KIAA1549Q9HCM3 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.09□□□□□ -1.75
KIAA1549Q9HCM3 RPEP2-201ENST00000432149 701 ntBASIC4.09□□□□□ -1.75
KIAA1549Q9HCM3 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
KIAA1549Q9HCM3 AC020898.1-201ENST00000474167 787 ntBASIC4.09□□□□□ -1.75
KIAA1549Q9HCM3 AC093840.1-201ENST00000511599 336 ntBASIC4.09□□□□□ -1.75
KIAA1549Q9HCM3 AC138832.1-201ENST00000522871 556 ntBASIC4.09□□□□□ -1.75
KIAA1549Q9HCM3 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.09□□□□□ -1.75
KIAA1549Q9HCM3 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.09□□□□□ -1.75
KIAA1549Q9HCM3 AC069366.1-201ENST00000583159 838 ntBASIC4.09□□□□□ -1.75
KIAA1549Q9HCM3 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.09□□□□□ -1.75
KIAA1549Q9HCM3 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.09□□□□□ -1.75
KIAA1549Q9HCM3 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
KIAA1549Q9HCM3 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.09□□□□□ -1.75
KIAA1549Q9HCM3 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
KIAA1549Q9HCM3 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
KIAA1549Q9HCM3 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
KIAA1549Q9HCM3 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
KIAA1549Q9HCM3 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
KIAA1549Q9HCM3 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
KIAA1549Q9HCM3 AC027290.2-201ENST00000623210 18662 ntBASIC4.09□□□□□ -1.75
KIAA1549Q9HCM3 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
KIAA1549Q9HCM3 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.09□□□□□ -1.76
KIAA1549Q9HCM3 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC4.09□□□□□ -1.76
KIAA1549Q9HCM3 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.76
KIAA1549Q9HCM3 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC4.09□□□□□ -1.76
KIAA1549Q9HCM3 RPL12P34-201ENST00000424532 479 ntBASIC4.09□□□□□ -1.76
KIAA1549Q9HCM3 AC023141.6-201ENST00000429418 337 ntBASIC4.09□□□□□ -1.76
KIAA1549Q9HCM3 ISCUP1-201ENST00000454451 448 ntBASIC4.09□□□□□ -1.76
KIAA1549Q9HCM3 RPL7AP10-201ENST00000481016 791 ntBASIC4.09□□□□□ -1.76
KIAA1549Q9HCM3 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.09□□□□□ -1.76
KIAA1549Q9HCM3 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC4.09□□□□□ -1.76
KIAA1549Q9HCM3 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
KIAA1549Q9HCM3 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.09□□□□□ -1.76
KIAA1549Q9HCM3 AC015871.5-202ENST00000623252 701 ntBASIC4.09□□□□□ -1.76
KIAA1549Q9HCM3 AC068724.3-201ENST00000625906 87 ntBASIC4.09□□□□□ -1.76
KIAA1549Q9HCM3 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.09□□□□□ -1.76
KIAA1549Q9HCM3 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.09□□□□□ -1.76
KIAA1549Q9HCM3 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
KIAA1549Q9HCM3 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.76
KIAA1549Q9HCM3 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
KIAA1549Q9HCM3 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
KIAA1549Q9HCM3 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
KIAA1549Q9HCM3 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
KIAA1549Q9HCM3 ZNF137P-201ENST00000456718 1920 ntBASIC4.08□□□□□ -1.76
KIAA1549Q9HCM3 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
KIAA1549Q9HCM3 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.08□□□□□ -1.76
KIAA1549Q9HCM3 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
KIAA1549Q9HCM3 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.08□□□□□ -1.76
KIAA1549Q9HCM3 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC4.08□□□□□ -1.76
KIAA1549Q9HCM3 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms