Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC7.17□□□□□ -1.26
TRAIPQ9BWF2 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC7.17□□□□□ -1.26
TRAIPQ9BWF2 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
TRAIPQ9BWF2 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
TRAIPQ9BWF2 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
TRAIPQ9BWF2 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
TRAIPQ9BWF2 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC7.17□□□□□ -1.26
TRAIPQ9BWF2 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
TRAIPQ9BWF2 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
TRAIPQ9BWF2 SNORD35A-201ENST00000363389 86 ntBASIC7.17□□□□□ -1.26
TRAIPQ9BWF2 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
TRAIPQ9BWF2 AL121972.1-201ENST00000402023 252 ntBASIC7.17□□□□□ -1.26
TRAIPQ9BWF2 RPL7P58-201ENST00000402913 758 ntBASIC7.17□□□□□ -1.26
TRAIPQ9BWF2 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC7.17□□□□□ -1.26
TRAIPQ9BWF2 AC007899.1-201ENST00000412776 775 ntBASIC7.17□□□□□ -1.26
TRAIPQ9BWF2 RPL17P12-201ENST00000413391 526 ntBASIC7.17□□□□□ -1.26
TRAIPQ9BWF2 AC004022.2-201ENST00000413824 193 ntBASIC7.17□□□□□ -1.26
TRAIPQ9BWF2 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
TRAIPQ9BWF2 RPL21P50-201ENST00000417698 477 ntBASIC7.17□□□□□ -1.26
TRAIPQ9BWF2 AL512649.1-201ENST00000428997 581 ntBASIC7.17□□□□□ -1.26
TRAIPQ9BWF2 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC7.17□□□□□ -1.26
TRAIPQ9BWF2 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC7.17□□□□□ -1.26
TRAIPQ9BWF2 MUPP-201ENST00000438111 566 ntBASIC7.17□□□□□ -1.26
TRAIPQ9BWF2 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC7.17□□□□□ -1.26
TRAIPQ9BWF2 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC7.17□□□□□ -1.26
TRAIPQ9BWF2 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC7.17□□□□□ -1.26
TRAIPQ9BWF2 OR52J1P-201ENST00000450596 932 ntBASIC7.17□□□□□ -1.26
TRAIPQ9BWF2 RPL5P32-201ENST00000454085 879 ntBASIC7.17□□□□□ -1.26
TRAIPQ9BWF2 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC7.17□□□□□ -1.26
TRAIPQ9BWF2 AC017015.1-201ENST00000477387 286 ntBASIC7.17□□□□□ -1.26
TRAIPQ9BWF2 RPL5P14-201ENST00000494197 878 ntBASIC7.17□□□□□ -1.26
TRAIPQ9BWF2 AC073581.1-201ENST00000519036 575 ntBASIC7.17□□□□□ -1.26
TRAIPQ9BWF2 IGHV7-34-1-201ENST00000519200 350 ntBASIC7.17□□□□□ -1.26
TRAIPQ9BWF2 TBCA-209ENST00000522370 435 ntTSL 3 BASIC7.17□□□□□ -1.26
TRAIPQ9BWF2 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC7.17□□□□□ -1.26
TRAIPQ9BWF2 AL133399.1-201ENST00000527476 298 ntBASIC7.17□□□□□ -1.26
TRAIPQ9BWF2 OR4A45P-201ENST00000529954 901 ntBASIC7.17□□□□□ -1.26
TRAIPQ9BWF2 AC068587.4-201ENST00000533893 186 ntBASIC7.17□□□□□ -1.26
TRAIPQ9BWF2 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC7.17□□□□□ -1.26
TRAIPQ9BWF2 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC7.17□□□□□ -1.26
TRAIPQ9BWF2 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC7.17□□□□□ -1.26
TRAIPQ9BWF2 DEFB131E-202ENST00000602581 683 ntBASIC7.17□□□□□ -1.26
TRAIPQ9BWF2 uc_338.31-201ENST00000615595 186 ntBASIC7.17□□□□□ -1.26
TRAIPQ9BWF2 U1.41-201ENST00000617626 165 ntBASIC7.17□□□□□ -1.26
TRAIPQ9BWF2 AC068792.1-201ENST00000621354 417 ntBASIC7.17□□□□□ -1.26
TRAIPQ9BWF2 PACRG-211ENST00000621363 360 ntTSL 5 BASIC7.17□□□□□ -1.26
TRAIPQ9BWF2 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
TRAIPQ9BWF2 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC7.17□□□□□ -1.26
TRAIPQ9BWF2 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC7.17□□□□□ -1.26
TRAIPQ9BWF2 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC7.17□□□□□ -1.26
TRAIPQ9BWF2 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC7.17□□□□□ -1.26
TRAIPQ9BWF2 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC7.17□□□□□ -1.26
TRAIPQ9BWF2 TEK-202ENST00000406359 3935 ntTSL 2 BASIC7.17□□□□□ -1.26
TRAIPQ9BWF2 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC7.17□□□□□ -1.26
TRAIPQ9BWF2 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC7.17□□□□□ -1.26
TRAIPQ9BWF2 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
TRAIPQ9BWF2 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
TRAIPQ9BWF2 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
TRAIPQ9BWF2 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
TRAIPQ9BWF2 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
TRAIPQ9BWF2 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
TRAIPQ9BWF2 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC7.16□□□□□ -1.26
TRAIPQ9BWF2 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
TRAIPQ9BWF2 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC7.16□□□□□ -1.26
TRAIPQ9BWF2 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC7.16□□□□□ -1.26
TRAIPQ9BWF2 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC7.16□□□□□ -1.26
TRAIPQ9BWF2 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
TRAIPQ9BWF2 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
TRAIPQ9BWF2 RNA5SP232-201ENST00000364144 119 ntBASIC7.16□□□□□ -1.26
TRAIPQ9BWF2 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
TRAIPQ9BWF2 RNU6-1042P-201ENST00000384204 107 ntBASIC7.16□□□□□ -1.26
TRAIPQ9BWF2 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
TRAIPQ9BWF2 AL713922.1-201ENST00000416477 747 ntBASIC7.16□□□□□ -1.26
TRAIPQ9BWF2 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
TRAIPQ9BWF2 AL590609.2-201ENST00000421430 368 ntBASIC7.16□□□□□ -1.26
TRAIPQ9BWF2 RPS27AP7-201ENST00000422792 455 ntBASIC7.16□□□□□ -1.26
TRAIPQ9BWF2 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC7.16□□□□□ -1.26
TRAIPQ9BWF2 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
TRAIPQ9BWF2 CYCSP51-201ENST00000443545 318 ntBASIC7.16□□□□□ -1.26
TRAIPQ9BWF2 IGBP1P3-201ENST00000447449 1000 ntBASIC7.16□□□□□ -1.26
TRAIPQ9BWF2 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC7.16□□□□□ -1.26
TRAIPQ9BWF2 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC7.16□□□□□ -1.26
TRAIPQ9BWF2 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
TRAIPQ9BWF2 RN7SL39P-201ENST00000462264 297 ntBASIC7.16□□□□□ -1.26
TRAIPQ9BWF2 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC7.16□□□□□ -1.26
TRAIPQ9BWF2 AC104339.1-201ENST00000465478 348 ntBASIC7.16□□□□□ -1.26
TRAIPQ9BWF2 RPS15AP17-201ENST00000470598 390 ntBASIC7.16□□□□□ -1.26
TRAIPQ9BWF2 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC7.16□□□□□ -1.26
TRAIPQ9BWF2 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC7.16□□□□□ -1.26
TRAIPQ9BWF2 OR7E99P-201ENST00000505750 922 ntBASIC7.16□□□□□ -1.26
TRAIPQ9BWF2 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC7.16□□□□□ -1.26
TRAIPQ9BWF2 AC006499.2-201ENST00000513470 337 ntBASIC7.16□□□□□ -1.26
TRAIPQ9BWF2 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC7.16□□□□□ -1.26
TRAIPQ9BWF2 AC008429.2-201ENST00000523057 864 ntBASIC7.16□□□□□ -1.26
TRAIPQ9BWF2 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC7.16□□□□□ -1.26
TRAIPQ9BWF2 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC7.16□□□□□ -1.26
TRAIPQ9BWF2 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC7.16□□□□□ -1.26
TRAIPQ9BWF2 AC078795.2-201ENST00000602835 1252 ntBASIC7.16□□□□□ -1.26
TRAIPQ9BWF2 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC7.16□□□□□ -1.26
TRAIPQ9BWF2 AC090181.2-201ENST00000602975 672 ntBASIC7.16□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms