Protein–RNA interactions for Protein: Q96QK1

VPS35, Vacuolar protein sorting-associated protein 35, humanhuman

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35Q96QK1 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
VPS35Q96QK1 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.83□□□□□ -1.64
VPS35Q96QK1 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
VPS35Q96QK1 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
VPS35Q96QK1 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
VPS35Q96QK1 RNU6-564P-201ENST00000410983 104 ntBASIC4.83□□□□□ -1.64
VPS35Q96QK1 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.83□□□□□ -1.64
VPS35Q96QK1 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.83□□□□□ -1.64
VPS35Q96QK1 MTCYBP7-201ENST00000419540 1134 ntBASIC4.83□□□□□ -1.64
VPS35Q96QK1 AL590762.4-201ENST00000425885 253 ntBASIC4.83□□□□□ -1.64
VPS35Q96QK1 PA2G4P6-201ENST00000438325 1197 ntBASIC4.83□□□□□ -1.64
VPS35Q96QK1 XKRYP6-201ENST00000440468 1116 ntBASIC4.83□□□□□ -1.64
VPS35Q96QK1 XKRYP3-201ENST00000442113 1116 ntBASIC4.83□□□□□ -1.64
VPS35Q96QK1 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.83□□□□□ -1.64
VPS35Q96QK1 AL591363.1-201ENST00000450091 483 ntBASIC4.83□□□□□ -1.64
VPS35Q96QK1 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.83□□□□□ -1.64
VPS35Q96QK1 AC069277.2-201ENST00000454211 432 ntBASIC4.83□□□□□ -1.64
VPS35Q96QK1 STRADBP1-201ENST00000478954 1281 ntBASIC4.83□□□□□ -1.64
VPS35Q96QK1 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.83□□□□□ -1.64
VPS35Q96QK1 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.83□□□□□ -1.64
VPS35Q96QK1 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.83□□□□□ -1.64
VPS35Q96QK1 BRD9P1-201ENST00000529855 560 ntBASIC4.83□□□□□ -1.64
VPS35Q96QK1 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.83□□□□□ -1.64
VPS35Q96QK1 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.83□□□□□ -1.64
VPS35Q96QK1 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.83□□□□□ -1.64
VPS35Q96QK1 CD24P2-201ENST00000565486 219 ntBASIC4.83□□□□□ -1.64
VPS35Q96QK1 MIR4436B2-201ENST00000581415 91 ntBASIC4.83□□□□□ -1.64
VPS35Q96QK1 MIR4436B1-201ENST00000583272 91 ntBASIC4.83□□□□□ -1.64
VPS35Q96QK1 SNX6P1-201ENST00000601728 1224 ntBASIC4.83□□□□□ -1.64
VPS35Q96QK1 AL133406.3-201ENST00000606817 541 ntBASIC4.83□□□□□ -1.64
VPS35Q96QK1 AC007497.1-201ENST00000610421 561 ntBASIC4.83□□□□□ -1.64
VPS35Q96QK1 AL049539.1-201ENST00000611964 459 ntBASIC4.83□□□□□ -1.64
VPS35Q96QK1 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.83□□□□□ -1.64
VPS35Q96QK1 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.83□□□□□ -1.64
VPS35Q96QK1 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.83□□□□□ -1.64
VPS35Q96QK1 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.83□□□□□ -1.64
VPS35Q96QK1 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.83□□□□□ -1.64
VPS35Q96QK1 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.83□□□□□ -1.64
VPS35Q96QK1 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
VPS35Q96QK1 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
VPS35Q96QK1 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
VPS35Q96QK1 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
VPS35Q96QK1 MTCO1P8-201ENST00000416914 1523 ntBASIC4.82□□□□□ -1.64
VPS35Q96QK1 VPS35P1-201ENST00000563400 1518 ntBASIC4.82□□□□□ -1.64
VPS35Q96QK1 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
VPS35Q96QK1 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
VPS35Q96QK1 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.82□□□□□ -1.64
VPS35Q96QK1 AC009643.2-201ENST00000603543 1448 ntBASIC4.82□□□□□ -1.64
VPS35Q96QK1 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
VPS35Q96QK1 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
VPS35Q96QK1 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.82□□□□□ -1.64
VPS35Q96QK1 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
VPS35Q96QK1 RNU4-7P-201ENST00000364758 141 ntBASIC4.82□□□□□ -1.64
VPS35Q96QK1 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC4.82□□□□□ -1.64
VPS35Q96QK1 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
VPS35Q96QK1 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.82□□□□□ -1.64
VPS35Q96QK1 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
VPS35Q96QK1 RPL10P10-201ENST00000403509 664 ntBASIC4.82□□□□□ -1.64
VPS35Q96QK1 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.82□□□□□ -1.64
VPS35Q96QK1 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
VPS35Q96QK1 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC4.82□□□□□ -1.64
VPS35Q96QK1 MTCO1P45-201ENST00000431457 267 ntBASIC4.82□□□□□ -1.64
VPS35Q96QK1 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
VPS35Q96QK1 BTF3P6-201ENST00000448054 499 ntBASIC4.82□□□□□ -1.64
VPS35Q96QK1 AL157884.3-201ENST00000448273 1184 ntBASIC4.82□□□□□ -1.64
VPS35Q96QK1 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.82□□□□□ -1.64
VPS35Q96QK1 BUD31P2-201ENST00000449374 300 ntBASIC4.82□□□□□ -1.64
VPS35Q96QK1 RPS3AP53-201ENST00000454716 778 ntBASIC4.82□□□□□ -1.64
VPS35Q96QK1 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.82□□□□□ -1.64
VPS35Q96QK1 AL133244.1-201ENST00000456007 258 ntBASIC4.82□□□□□ -1.64
VPS35Q96QK1 GYG1P1-201ENST00000460864 698 ntBASIC4.82□□□□□ -1.64
VPS35Q96QK1 RPL7AP10-201ENST00000481016 791 ntBASIC4.82□□□□□ -1.64
VPS35Q96QK1 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.82□□□□□ -1.64
VPS35Q96QK1 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC4.82□□□□□ -1.64
VPS35Q96QK1 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.82□□□□□ -1.64
VPS35Q96QK1 BUD31P1-201ENST00000521828 359 ntBASIC4.82□□□□□ -1.64
VPS35Q96QK1 AC022784.5-201ENST00000522241 437 ntBASIC4.82□□□□□ -1.64
VPS35Q96QK1 MORF4L1P3-201ENST00000525966 950 ntBASIC4.82□□□□□ -1.64
VPS35Q96QK1 AC009268.1-201ENST00000561352 1203 ntBASIC4.82□□□□□ -1.64
VPS35Q96QK1 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.82□□□□□ -1.64
VPS35Q96QK1 SNORA74C-1-201ENST00000580726 201 ntBASIC4.82□□□□□ -1.64
VPS35Q96QK1 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.82□□□□□ -1.64
VPS35Q96QK1 MIR4737-201ENST00000583979 81 ntBASIC4.82□□□□□ -1.64
VPS35Q96QK1 MIR4443-201ENST00000585052 53 ntBASIC4.82□□□□□ -1.64
VPS35Q96QK1 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.82□□□□□ -1.64
VPS35Q96QK1 AC011453.2-201ENST00000603737 729 ntBASIC4.82□□□□□ -1.64
VPS35Q96QK1 AL356274.1-201ENST00000617064 410 ntBASIC4.82□□□□□ -1.64
VPS35Q96QK1 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.82□□□□□ -1.64
VPS35Q96QK1 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.82□□□□□ -1.64
VPS35Q96QK1 MIR6730-201ENST00000622213 67 ntBASIC4.82□□□□□ -1.64
VPS35Q96QK1 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.82□□□□□ -1.64
VPS35Q96QK1 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
VPS35Q96QK1 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
VPS35Q96QK1 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
VPS35Q96QK1 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.82□□□□□ -1.64
VPS35Q96QK1 SAMMSON-226ENST00000642089 1582 ntBASIC4.82□□□□□ -1.64
VPS35Q96QK1 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
VPS35Q96QK1 OR14L1P-202ENST00000641545 3009 ntBASIC4.81□□□□□ -1.64
VPS35Q96QK1 HSPA8P17-201ENST00000427029 1382 ntBASIC4.81□□□□□ -1.64
VPS35Q96QK1 SDAD1P1-202ENST00000524156 2051 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms