Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
CSMD1Q96PZ7 MIR3065-201ENST00000390137 79 ntBASIC3.74□□□□□ -1.81
CSMD1Q96PZ7 AC233982.1-201ENST00000451247 436 ntBASIC3.74□□□□□ -1.81
CSMD1Q96PZ7 RPL7P9-201ENST00000468715 747 ntBASIC3.74□□□□□ -1.81
CSMD1Q96PZ7 RPL35P6-201ENST00000490024 372 ntBASIC3.74□□□□□ -1.81
CSMD1Q96PZ7 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.74□□□□□ -1.81
CSMD1Q96PZ7 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC3.74□□□□□ -1.81
CSMD1Q96PZ7 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.74□□□□□ -1.81
CSMD1Q96PZ7 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CSMD1Q96PZ7 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.74□□□□□ -1.81
CSMD1Q96PZ7 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CSMD1Q96PZ7 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CSMD1Q96PZ7 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC3.73□□□□□ -1.81
CSMD1Q96PZ7 CEP63-202ENST00000337090 5632 ntAPPRIS P3 TSL 5 BASIC3.73□□□□□ -1.81
CSMD1Q96PZ7 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CSMD1Q96PZ7 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC3.73□□□□□ -1.81
CSMD1Q96PZ7 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CSMD1Q96PZ7 RN7SKP74-201ENST00000362849 309 ntBASIC3.73□□□□□ -1.81
CSMD1Q96PZ7 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CSMD1Q96PZ7 VN1R51P-201ENST00000411675 945 ntBASIC3.73□□□□□ -1.81
CSMD1Q96PZ7 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.73□□□□□ -1.81
CSMD1Q96PZ7 EIF2S2P5-201ENST00000457635 968 ntBASIC3.73□□□□□ -1.81
CSMD1Q96PZ7 ALG13-211ENST00000473389 693 ntTSL 2 BASIC3.73□□□□□ -1.81
CSMD1Q96PZ7 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.73□□□□□ -1.81
CSMD1Q96PZ7 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC3.73□□□□□ -1.81
CSMD1Q96PZ7 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CSMD1Q96PZ7 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CSMD1Q96PZ7 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
CSMD1Q96PZ7 PBRM1-203ENST00000356770 7523 ntAPPRIS ALT1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CSMD1Q96PZ7 AKR1C1-202ENST00000380872 6705 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CSMD1Q96PZ7 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
CSMD1Q96PZ7 GAPDHP14-201ENST00000450472 937 ntBASIC3.73□□□□□ -1.81
CSMD1Q96PZ7 AC074250.1-201ENST00000511117 192 ntBASIC3.73□□□□□ -1.81
CSMD1Q96PZ7 RNU4ATAC18P-201ENST00000516179 126 ntBASIC3.73□□□□□ -1.81
CSMD1Q96PZ7 DYNLL1P4-201ENST00000549314 266 ntBASIC3.73□□□□□ -1.81
CSMD1Q96PZ7 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC3.73□□□□□ -1.81
CSMD1Q96PZ7 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC3.73□□□□□ -1.81
CSMD1Q96PZ7 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CSMD1Q96PZ7 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CSMD1Q96PZ7 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CSMD1Q96PZ7 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC3.73□□□□□ -1.81
CSMD1Q96PZ7 ARHGAP42P1-201ENST00000507474 1976 ntBASIC3.73□□□□□ -1.81
CSMD1Q96PZ7 AL731532.2-201ENST00000623542 1953 ntBASIC3.73□□□□□ -1.81
CSMD1Q96PZ7 FREM1-204ENST00000422223 10086 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
CSMD1Q96PZ7 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC3.73□□□□□ -1.81
CSMD1Q96PZ7 MAPK10-253ENST00000641010 4072 ntBASIC3.73□□□□□ -1.81
CSMD1Q96PZ7 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CSMD1Q96PZ7 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CSMD1Q96PZ7 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CSMD1Q96PZ7 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
CSMD1Q96PZ7 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
CSMD1Q96PZ7 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.73□□□□□ -1.81
CSMD1Q96PZ7 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CSMD1Q96PZ7 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.73□□□□□ -1.81
CSMD1Q96PZ7 AL358832.1-201ENST00000497800 389 ntBASIC3.73□□□□□ -1.81
CSMD1Q96PZ7 PGBD4P4-201ENST00000509673 613 ntBASIC3.73□□□□□ -1.81
CSMD1Q96PZ7 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.73□□□□□ -1.81
CSMD1Q96PZ7 EIF4A2P1-201ENST00000587313 1063 ntBASIC3.73□□□□□ -1.81
CSMD1Q96PZ7 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC3.73□□□□□ -1.81
CSMD1Q96PZ7 RAB21-201ENST00000261263 15546 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CSMD1Q96PZ7 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CSMD1Q96PZ7 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC3.72□□□□□ -1.81
CSMD1Q96PZ7 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CSMD1Q96PZ7 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC3.72□□□□□ -1.81
CSMD1Q96PZ7 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC3.72□□□□□ -1.81
CSMD1Q96PZ7 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC3.72□□□□□ -1.81
CSMD1Q96PZ7 AC116553.2-201ENST00000564203 463 ntBASIC3.72□□□□□ -1.81
CSMD1Q96PZ7 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC3.72□□□□□ -1.81
CSMD1Q96PZ7 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CSMD1Q96PZ7 BMPR1APS1-201ENST00000403332 1598 ntBASIC3.72□□□□□ -1.81
CSMD1Q96PZ7 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC3.72□□□□□ -1.81
CSMD1Q96PZ7 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC3.72□□□□□ -1.81
CSMD1Q96PZ7 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CSMD1Q96PZ7 AL603766.1-201ENST00000407763 664 ntBASIC3.72□□□□□ -1.81
CSMD1Q96PZ7 AC016772.1-201ENST00000444170 1261 ntBASIC3.72□□□□□ -1.81
CSMD1Q96PZ7 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CSMD1Q96PZ7 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC3.72□□□□□ -1.81
CSMD1Q96PZ7 WNT2B-203ENST00000369686 10879 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CSMD1Q96PZ7 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CSMD1Q96PZ7 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
CSMD1Q96PZ7 VLDLR-203ENST00000382100 9163 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
CSMD1Q96PZ7 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC3.72□□□□□ -1.81
CSMD1Q96PZ7 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC3.72□□□□□ -1.81
CSMD1Q96PZ7 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.72□□□□□ -1.81
CSMD1Q96PZ7 MIR3651-201ENST00000630427 90 ntBASIC3.72□□□□□ -1.81
CSMD1Q96PZ7 AC055839.1-201ENST00000634467 498 ntBASIC3.72□□□□□ -1.81
CSMD1Q96PZ7 OR2M4-202ENST00000641868 5934 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
CSMD1Q96PZ7 KIF1B-202ENST00000377081 8746 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
CSMD1Q96PZ7 ZCCHC11-201ENST00000257177 5743 ntAPPRIS P4 TSL 1 (best) BASIC3.71□□□□□ -1.81
CSMD1Q96PZ7 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
CSMD1Q96PZ7 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
CSMD1Q96PZ7 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
CSMD1Q96PZ7 MARK2P15-201ENST00000432204 2186 ntBASIC3.71□□□□□ -1.82
CSMD1Q96PZ7 RNA5SP513-201ENST00000364648 118 ntBASIC3.71□□□□□ -1.82
CSMD1Q96PZ7 SNORA5A-201ENST00000384111 134 ntBASIC3.71□□□□□ -1.82
CSMD1Q96PZ7 RNVU1-14-201ENST00000384770 164 ntBASIC3.71□□□□□ -1.82
CSMD1Q96PZ7 AL035079.1-201ENST00000405210 287 ntBASIC3.71□□□□□ -1.82
CSMD1Q96PZ7 HNRNPA1P29-201ENST00000426409 879 ntBASIC3.71□□□□□ -1.82
CSMD1Q96PZ7 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC3.71□□□□□ -1.82
CSMD1Q96PZ7 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms