Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RNF31Q96EP0 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
RNF31Q96EP0 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.51□□□□□ -1.53
RNF31Q96EP0 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
RNF31Q96EP0 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RNF31Q96EP0 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RNF31Q96EP0 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RNF31Q96EP0 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
RNF31Q96EP0 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.5□□□□□ -1.53
RNF31Q96EP0 MTCO1P18-201ENST00000455518 1419 ntBASIC5.5□□□□□ -1.53
RNF31Q96EP0 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RNF31Q96EP0 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.5□□□□□ -1.53
RNF31Q96EP0 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.5□□□□□ -1.53
RNF31Q96EP0 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.5□□□□□ -1.53
RNF31Q96EP0 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RNF31Q96EP0 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RNF31Q96EP0 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
RNF31Q96EP0 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RNF31Q96EP0 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC5.5□□□□□ -1.53
RNF31Q96EP0 RNA5SP46-201ENST00000362370 120 ntBASIC5.5□□□□□ -1.53
RNF31Q96EP0 RN7SKP162-201ENST00000363605 345 ntBASIC5.5□□□□□ -1.53
RNF31Q96EP0 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
RNF31Q96EP0 CHMP1B2P-201ENST00000399581 597 ntBASIC5.5□□□□□ -1.53
RNF31Q96EP0 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
RNF31Q96EP0 NUDT19P3-201ENST00000404698 555 ntBASIC5.5□□□□□ -1.53
RNF31Q96EP0 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC5.5□□□□□ -1.53
RNF31Q96EP0 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.5□□□□□ -1.53
RNF31Q96EP0 PTP4A1P1-201ENST00000420539 515 ntBASIC5.5□□□□□ -1.53
RNF31Q96EP0 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC5.5□□□□□ -1.53
RNF31Q96EP0 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.5□□□□□ -1.53
RNF31Q96EP0 AL035407.1-201ENST00000429211 571 ntBASIC5.5□□□□□ -1.53
RNF31Q96EP0 BX276092.6-201ENST00000430476 250 ntBASIC5.5□□□□□ -1.53
RNF31Q96EP0 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC5.5□□□□□ -1.53
RNF31Q96EP0 MTND1P32-201ENST00000433043 938 ntBASIC5.5□□□□□ -1.53
RNF31Q96EP0 AL731534.1-201ENST00000434711 269 ntBASIC5.5□□□□□ -1.53
RNF31Q96EP0 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.5□□□□□ -1.53
RNF31Q96EP0 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC5.5□□□□□ -1.53
RNF31Q96EP0 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC5.5□□□□□ -1.53
RNF31Q96EP0 MTND5P2-201ENST00000442927 1142 ntBASIC5.5□□□□□ -1.53
RNF31Q96EP0 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.5□□□□□ -1.53
RNF31Q96EP0 ELOCP30-201ENST00000447108 299 ntBASIC5.5□□□□□ -1.53
RNF31Q96EP0 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RNF31Q96EP0 BX276092.8-201ENST00000455722 250 ntBASIC5.5□□□□□ -1.53
RNF31Q96EP0 AC004129.2-201ENST00000457229 287 ntBASIC5.5□□□□□ -1.53
RNF31Q96EP0 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RNF31Q96EP0 AC108734.3-201ENST00000481241 1165 ntBASIC5.5□□□□□ -1.53
RNF31Q96EP0 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.5□□□□□ -1.53
RNF31Q96EP0 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RNF31Q96EP0 ST13P12-201ENST00000508958 1094 ntBASIC5.5□□□□□ -1.53
RNF31Q96EP0 XKRY-201ENST00000510392 1100 ntBASIC5.5□□□□□ -1.53
RNF31Q96EP0 MTCYBP37-201ENST00000510642 1133 ntBASIC5.5□□□□□ -1.53
RNF31Q96EP0 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.5□□□□□ -1.53
RNF31Q96EP0 AC020937.1-201ENST00000519677 1013 ntBASIC5.5□□□□□ -1.53
RNF31Q96EP0 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.5□□□□□ -1.53
RNF31Q96EP0 MTCO1P49-201ENST00000523429 802 ntBASIC5.5□□□□□ -1.53
RNF31Q96EP0 MRPS16P1-201ENST00000523462 412 ntBASIC5.5□□□□□ -1.53
RNF31Q96EP0 OR6M2P-201ENST00000529831 871 ntBASIC5.5□□□□□ -1.53
RNF31Q96EP0 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RNF31Q96EP0 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.5□□□□□ -1.53
RNF31Q96EP0 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.5□□□□□ -1.53
RNF31Q96EP0 AC024909.2-201ENST00000553035 286 ntBASIC5.5□□□□□ -1.53
RNF31Q96EP0 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.5□□□□□ -1.53
RNF31Q96EP0 AC007225.2-201ENST00000562529 256 ntBASIC5.5□□□□□ -1.53
RNF31Q96EP0 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC5.5□□□□□ -1.53
RNF31Q96EP0 AC022662.1-201ENST00000580252 331 ntBASIC5.5□□□□□ -1.53
RNF31Q96EP0 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.5□□□□□ -1.53
RNF31Q96EP0 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC5.5□□□□□ -1.53
RNF31Q96EP0 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.5□□□□□ -1.53
RNF31Q96EP0 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RNF31Q96EP0 AC124312.4-201ENST00000605533 310 ntBASIC5.5□□□□□ -1.53
RNF31Q96EP0 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RNF31Q96EP0 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.5□□□□□ -1.53
RNF31Q96EP0 AL159169.2-201ENST00000610061 1269 ntBASIC5.5□□□□□ -1.53
RNF31Q96EP0 AL354976.1-201ENST00000613843 387 ntBASIC5.5□□□□□ -1.53
RNF31Q96EP0 AL139099.4-201ENST00000614802 114 ntBASIC5.5□□□□□ -1.53
RNF31Q96EP0 AC005840.5-201ENST00000619166 599 ntBASIC5.5□□□□□ -1.53
RNF31Q96EP0 AL691477.1-201ENST00000624398 162 ntBASIC5.5□□□□□ -1.53
RNF31Q96EP0 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.5□□□□□ -1.53
RNF31Q96EP0 LINC01808-202ENST00000641680 1116 ntBASIC5.5□□□□□ -1.53
RNF31Q96EP0 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
RNF31Q96EP0 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
RNF31Q96EP0 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RNF31Q96EP0 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.5□□□□□ -1.53
RNF31Q96EP0 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.5□□□□□ -1.53
RNF31Q96EP0 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RNF31Q96EP0 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.5□□□□□ -1.53
RNF31Q96EP0 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
RNF31Q96EP0 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RNF31Q96EP0 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RNF31Q96EP0 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RNF31Q96EP0 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RNF31Q96EP0 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
RNF31Q96EP0 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RNF31Q96EP0 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.49□□□□□ -1.53
RNF31Q96EP0 RNU2-22P-201ENST00000411266 212 ntBASIC5.49□□□□□ -1.53
RNF31Q96EP0 RPS6P23-201ENST00000413224 722 ntBASIC5.49□□□□□ -1.53
RNF31Q96EP0 NPM1P4-201ENST00000414095 812 ntBASIC5.49□□□□□ -1.53
RNF31Q96EP0 LINC01347-201ENST00000417964 355 ntBASIC5.49□□□□□ -1.53
RNF31Q96EP0 AK4P4-201ENST00000419465 646 ntBASIC5.49□□□□□ -1.53
RNF31Q96EP0 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms