Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AC008083.2-201ENST00000546707 476 ntBASIC6.38□□□□□ -1.39
CHMP4CQ96CF2 AC004825.1-201ENST00000555068 586 ntBASIC6.38□□□□□ -1.39
CHMP4CQ96CF2 CLMN-206ENST00000556441 452 ntTSL 5 BASIC6.38□□□□□ -1.39
CHMP4CQ96CF2 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC6.38□□□□□ -1.39
CHMP4CQ96CF2 AC122134.1-201ENST00000565664 1104 ntBASIC6.38□□□□□ -1.39
CHMP4CQ96CF2 RN7SL356P-201ENST00000582228 248 ntBASIC6.38□□□□□ -1.39
CHMP4CQ96CF2 VN1R87P-201ENST00000596706 487 ntBASIC6.38□□□□□ -1.39
CHMP4CQ96CF2 AP002906.1-201ENST00000603405 233 ntBASIC6.38□□□□□ -1.39
CHMP4CQ96CF2 AC016769.4-201ENST00000616893 535 ntBASIC6.38□□□□□ -1.39
CHMP4CQ96CF2 AC008115.4-201ENST00000619780 775 ntBASIC6.38□□□□□ -1.39
CHMP4CQ96CF2 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CHMP4CQ96CF2 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CHMP4CQ96CF2 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC6.38□□□□□ -1.39
CHMP4CQ96CF2 AC011493.1-201ENST00000596753 1632 ntBASIC6.38□□□□□ -1.39
CHMP4CQ96CF2 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC6.38□□□□□ -1.39
CHMP4CQ96CF2 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CHMP4CQ96CF2 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC6.38□□□□□ -1.39
CHMP4CQ96CF2 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC6.38□□□□□ -1.39
CHMP4CQ96CF2 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
CHMP4CQ96CF2 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC6.38□□□□□ -1.39
CHMP4CQ96CF2 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC6.38□□□□□ -1.39
CHMP4CQ96CF2 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC6.38□□□□□ -1.39
CHMP4CQ96CF2 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
CHMP4CQ96CF2 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CHMP4CQ96CF2 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC6.37□□□□□ -1.39
CHMP4CQ96CF2 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
CHMP4CQ96CF2 Z95331.1-201ENST00000623075 23112 ntBASIC6.37□□□□□ -1.39
CHMP4CQ96CF2 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CHMP4CQ96CF2 AC002525.1-201ENST00000624392 1622 ntBASIC6.37□□□□□ -1.39
CHMP4CQ96CF2 ZNF849P-201ENST00000594711 1566 ntBASIC6.37□□□□□ -1.39
CHMP4CQ96CF2 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CHMP4CQ96CF2 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
CHMP4CQ96CF2 METTL21EP-201ENST00000298105 713 ntBASIC6.37□□□□□ -1.39
CHMP4CQ96CF2 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CHMP4CQ96CF2 OR1L6-202ENST00000373684 1044 ntBASIC6.37□□□□□ -1.39
CHMP4CQ96CF2 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC6.37□□□□□ -1.39
CHMP4CQ96CF2 ANAPC10P1-201ENST00000395991 556 ntBASIC6.37□□□□□ -1.39
CHMP4CQ96CF2 AL603865.2-201ENST00000401679 213 ntBASIC6.37□□□□□ -1.39
CHMP4CQ96CF2 MIR1286-201ENST00000408112 78 ntBASIC6.37□□□□□ -1.39
CHMP4CQ96CF2 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CHMP4CQ96CF2 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC6.37□□□□□ -1.39
CHMP4CQ96CF2 VTA1P1-201ENST00000414044 866 ntBASIC6.37□□□□□ -1.39
CHMP4CQ96CF2 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC6.37□□□□□ -1.39
CHMP4CQ96CF2 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC6.37□□□□□ -1.39
CHMP4CQ96CF2 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC6.37□□□□□ -1.39
CHMP4CQ96CF2 RPL19P16-201ENST00000433839 588 ntBASIC6.37□□□□□ -1.39
CHMP4CQ96CF2 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC6.37□□□□□ -1.39
CHMP4CQ96CF2 HSFY3P-201ENST00000444242 1191 ntBASIC6.37□□□□□ -1.39
CHMP4CQ96CF2 AC105399.1-202ENST00000447303 205 ntBASIC6.37□□□□□ -1.39
CHMP4CQ96CF2 CCNB1IP1P3-201ENST00000454702 829 ntBASIC6.37□□□□□ -1.39
CHMP4CQ96CF2 GTF2IP12-201ENST00000456547 356 ntBASIC6.37□□□□□ -1.39
CHMP4CQ96CF2 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC6.37□□□□□ -1.39
CHMP4CQ96CF2 AC005532.2-201ENST00000467154 373 ntBASIC6.37□□□□□ -1.39
CHMP4CQ96CF2 AC004815.1-201ENST00000484185 331 ntBASIC6.37□□□□□ -1.39
CHMP4CQ96CF2 RPS12P31-201ENST00000491419 398 ntBASIC6.37□□□□□ -1.39
CHMP4CQ96CF2 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC6.37□□□□□ -1.39
CHMP4CQ96CF2 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC6.37□□□□□ -1.39
CHMP4CQ96CF2 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
CHMP4CQ96CF2 AC147055.3-201ENST00000510547 851 ntBASIC6.37□□□□□ -1.39
CHMP4CQ96CF2 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC6.37□□□□□ -1.39
CHMP4CQ96CF2 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC6.37□□□□□ -1.39
CHMP4CQ96CF2 OR11H3P-201ENST00000554547 982 ntBASIC6.37□□□□□ -1.39
CHMP4CQ96CF2 AC127381.1-201ENST00000555979 939 ntBASIC6.37□□□□□ -1.39
CHMP4CQ96CF2 RPL10P14-201ENST00000565265 298 ntBASIC6.37□□□□□ -1.39
CHMP4CQ96CF2 AC005341.1-201ENST00000571086 708 ntBASIC6.37□□□□□ -1.39
CHMP4CQ96CF2 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC6.37□□□□□ -1.39
CHMP4CQ96CF2 MIR3691-201ENST00000578066 90 ntBASIC6.37□□□□□ -1.39
CHMP4CQ96CF2 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC6.37□□□□□ -1.39
CHMP4CQ96CF2 OR7E18P-201ENST00000592589 702 ntBASIC6.37□□□□□ -1.39
CHMP4CQ96CF2 AC073387.2-201ENST00000604797 784 ntBASIC6.37□□□□□ -1.39
CHMP4CQ96CF2 AL445222.1-201ENST00000607259 628 ntBASIC6.37□□□□□ -1.39
CHMP4CQ96CF2 AL451049.1-201ENST00000608672 497 ntBASIC6.37□□□□□ -1.39
CHMP4CQ96CF2 OR2BH1P-201ENST00000608850 864 ntBASIC6.37□□□□□ -1.39
CHMP4CQ96CF2 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC6.37□□□□□ -1.39
CHMP4CQ96CF2 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC6.37□□□□□ -1.39
CHMP4CQ96CF2 CYCSP41-201ENST00000616920 296 ntBASIC6.37□□□□□ -1.39
CHMP4CQ96CF2 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
CHMP4CQ96CF2 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC6.37□□□□□ -1.39
CHMP4CQ96CF2 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC6.37□□□□□ -1.39
CHMP4CQ96CF2 AC007342.8-201ENST00000623278 678 ntBASIC6.37□□□□□ -1.39
CHMP4CQ96CF2 AP003400.3-201ENST00000624904 346 ntBASIC6.37□□□□□ -1.39
CHMP4CQ96CF2 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC6.37□□□□□ -1.39
CHMP4CQ96CF2 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC6.37□□□□□ -1.39
CHMP4CQ96CF2 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CHMP4CQ96CF2 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CHMP4CQ96CF2 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
CHMP4CQ96CF2 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
CHMP4CQ96CF2 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CHMP4CQ96CF2 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CHMP4CQ96CF2 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC6.37□□□□□ -1.39
CHMP4CQ96CF2 LARS-201ENST00000274562 2213 ntTSL 2 BASIC6.37□□□□□ -1.39
CHMP4CQ96CF2 CASC19-284ENST00000642142 1868 ntBASIC6.36□□□□□ -1.39
CHMP4CQ96CF2 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC6.36□□□□□ -1.39
CHMP4CQ96CF2 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CHMP4CQ96CF2 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC6.36□□□□□ -1.39
CHMP4CQ96CF2 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC6.36□□□□□ -1.39
CHMP4CQ96CF2 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CHMP4CQ96CF2 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CHMP4CQ96CF2 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CHMP4CQ96CF2 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms