Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
TOPBP1Q92547 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC7.45□□□□□ -1.22
TOPBP1Q92547 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC7.45□□□□□ -1.22
TOPBP1Q92547 AL445487.1-201ENST00000415694 1580 ntBASIC7.44□□□□□ -1.22
TOPBP1Q92547 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
TOPBP1Q92547 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
TOPBP1Q92547 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
TOPBP1Q92547 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
TOPBP1Q92547 AC022417.1-201ENST00000624768 1303 ntBASIC7.44□□□□□ -1.22
TOPBP1Q92547 AC104651.2-201ENST00000447549 528 ntBASIC7.44□□□□□ -1.22
TOPBP1Q92547 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC7.44□□□□□ -1.22
TOPBP1Q92547 RNA5SP519-201ENST00000516480 119 ntBASIC7.44□□□□□ -1.22
TOPBP1Q92547 DYNLL1P4-201ENST00000549314 266 ntBASIC7.44□□□□□ -1.22
TOPBP1Q92547 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC7.44□□□□□ -1.22
TOPBP1Q92547 AC244100.1-202ENST00000621554 382 ntBASIC7.44□□□□□ -1.22
TOPBP1Q92547 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
TOPBP1Q92547 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC7.44□□□□□ -1.22
TOPBP1Q92547 RNU1-14P-201ENST00000362759 152 ntBASIC7.43□□□□□ -1.22
TOPBP1Q92547 RN7SKP235-201ENST00000410662 305 ntBASIC7.43□□□□□ -1.22
TOPBP1Q92547 RPL21P43-201ENST00000425440 472 ntBASIC7.43□□□□□ -1.22
TOPBP1Q92547 RPL35AP21-201ENST00000437667 333 ntBASIC7.43□□□□□ -1.22
TOPBP1Q92547 ARAFP2-201ENST00000440565 559 ntBASIC7.43□□□□□ -1.22
TOPBP1Q92547 AL500522.2-201ENST00000448562 343 ntBASIC7.43□□□□□ -1.22
TOPBP1Q92547 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC7.43□□□□□ -1.22
TOPBP1Q92547 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC7.43□□□□□ -1.22
TOPBP1Q92547 EIF2S2P5-201ENST00000457635 968 ntBASIC7.43□□□□□ -1.22
TOPBP1Q92547 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC7.43□□□□□ -1.22
TOPBP1Q92547 AC099522.1-202ENST00000514718 367 ntBASIC7.43□□□□□ -1.22
TOPBP1Q92547 OR5BC1P-201ENST00000529327 739 ntBASIC7.43□□□□□ -1.22
TOPBP1Q92547 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC7.43□□□□□ -1.22
TOPBP1Q92547 CYCSP40-201ENST00000575927 294 ntBASIC7.43□□□□□ -1.22
TOPBP1Q92547 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
TOPBP1Q92547 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
TOPBP1Q92547 AL133243.3-201ENST00000617415 3004 ntBASIC7.43□□□□□ -1.22
TOPBP1Q92547 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
TOPBP1Q92547 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
TOPBP1Q92547 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
TOPBP1Q92547 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
TOPBP1Q92547 AC068733.2-201ENST00000605434 1418 ntBASIC7.43□□□□□ -1.22
TOPBP1Q92547 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
TOPBP1Q92547 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
TOPBP1Q92547 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
TOPBP1Q92547 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC7.42□□□□□ -1.22
TOPBP1Q92547 AC008280.1-201ENST00000418851 412 ntBASIC7.42□□□□□ -1.22
TOPBP1Q92547 CKS1BP6-201ENST00000424932 240 ntBASIC7.42□□□□□ -1.22
TOPBP1Q92547 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC7.42□□□□□ -1.22
TOPBP1Q92547 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC7.42□□□□□ -1.22
TOPBP1Q92547 YME1L1P1-201ENST00000429435 297 ntBASIC7.42□□□□□ -1.22
TOPBP1Q92547 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC7.42□□□□□ -1.22
TOPBP1Q92547 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC7.42□□□□□ -1.22
TOPBP1Q92547 AC006499.6-201ENST00000511169 607 ntBASIC7.42□□□□□ -1.22
TOPBP1Q92547 OR7E10P-201ENST00000526420 991 ntBASIC7.42□□□□□ -1.22
TOPBP1Q92547 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC7.42□□□□□ -1.22
TOPBP1Q92547 TEX41-256ENST00000626411 368 ntTSL 5 BASIC7.42□□□□□ -1.22
TOPBP1Q92547 Z95114.1-201ENST00000624264 14574 ntBASIC7.42□□□□□ -1.22
TOPBP1Q92547 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
TOPBP1Q92547 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC7.42□□□□□ -1.22
TOPBP1Q92547 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
TOPBP1Q92547 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
TOPBP1Q92547 DDX18P5-201ENST00000534547 1306 ntBASIC7.42□□□□□ -1.22
TOPBP1Q92547 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
TOPBP1Q92547 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
TOPBP1Q92547 AC097374.1-203ENST00000400783 485 ntBASIC7.42□□□□□ -1.22
TOPBP1Q92547 RHEBP2-201ENST00000450289 600 ntBASIC7.42□□□□□ -1.22
TOPBP1Q92547 RPS27AP17-201ENST00000463344 455 ntBASIC7.42□□□□□ -1.22
TOPBP1Q92547 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC7.42□□□□□ -1.22
TOPBP1Q92547 AL356121.2-201ENST00000624715 780 ntBASIC7.42□□□□□ -1.22
TOPBP1Q92547 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC7.42□□□□□ -1.22
TOPBP1Q92547 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
TOPBP1Q92547 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
TOPBP1Q92547 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC7.41□□□□□ -1.22
TOPBP1Q92547 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC7.41□□□□□ -1.22
TOPBP1Q92547 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
TOPBP1Q92547 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC7.41□□□□□ -1.22
TOPBP1Q92547 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC7.41□□□□□ -1.22
TOPBP1Q92547 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
TOPBP1Q92547 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC7.41□□□□□ -1.22
TOPBP1Q92547 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC7.41□□□□□ -1.22
TOPBP1Q92547 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
TOPBP1Q92547 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
TOPBP1Q92547 GOT2P5-201ENST00000433995 546 ntBASIC7.41□□□□□ -1.22
TOPBP1Q92547 PGBD4P4-201ENST00000509673 613 ntBASIC7.41□□□□□ -1.22
TOPBP1Q92547 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
TOPBP1Q92547 NPM1P21-201ENST00000513394 762 ntBASIC7.41□□□□□ -1.22
TOPBP1Q92547 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC7.41□□□□□ -1.22
TOPBP1Q92547 AC006349.1-201ENST00000555526 235 ntBASIC7.41□□□□□ -1.22
TOPBP1Q92547 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC7.41□□□□□ -1.22
TOPBP1Q92547 MIR7151-201ENST00000617477 60 ntBASIC7.41□□□□□ -1.22
TOPBP1Q92547 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC7.41□□□□□ -1.22
TOPBP1Q92547 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
TOPBP1Q92547 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC7.4□□□□□ -1.22
TOPBP1Q92547 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
TOPBP1Q92547 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
TOPBP1Q92547 TEK-205ENST00000615002 4666 ntTSL 5 BASIC7.4□□□□□ -1.22
TOPBP1Q92547 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
TOPBP1Q92547 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC7.4□□□□□ -1.22
TOPBP1Q92547 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
TOPBP1Q92547 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
TOPBP1Q92547 AC073342.2-201ENST00000595842 1800 ntBASIC7.4□□□□□ -1.22
TOPBP1Q92547 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms