Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC3.91□□□□□ -1.78
RTN4IP1Q8WWV3 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
RTN4IP1Q8WWV3 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
RTN4IP1Q8WWV3 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
RTN4IP1Q8WWV3 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
RTN4IP1Q8WWV3 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC3.91□□□□□ -1.78
RTN4IP1Q8WWV3 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
RTN4IP1Q8WWV3 AL645927.1-201ENST00000396783 406 ntBASIC3.91□□□□□ -1.78
RTN4IP1Q8WWV3 AL139039.2-201ENST00000407436 479 ntBASIC3.91□□□□□ -1.78
RTN4IP1Q8WWV3 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC3.91□□□□□ -1.78
RTN4IP1Q8WWV3 CYCSP10-201ENST00000417973 294 ntBASIC3.91□□□□□ -1.78
RTN4IP1Q8WWV3 LINC00993-201ENST00000420453 540 ntBASIC3.91□□□□□ -1.78
RTN4IP1Q8WWV3 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC3.91□□□□□ -1.78
RTN4IP1Q8WWV3 AL645937.3-201ENST00000453647 936 ntBASIC3.91□□□□□ -1.78
RTN4IP1Q8WWV3 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC3.91□□□□□ -1.78
RTN4IP1Q8WWV3 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC3.91□□□□□ -1.78
RTN4IP1Q8WWV3 RN7SL214P-201ENST00000487317 265 ntBASIC3.91□□□□□ -1.78
RTN4IP1Q8WWV3 OR9N1P-201ENST00000491296 333 ntBASIC3.91□□□□□ -1.78
RTN4IP1Q8WWV3 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC3.91□□□□□ -1.78
RTN4IP1Q8WWV3 BTF3P13-201ENST00000513224 490 ntBASIC3.91□□□□□ -1.78
RTN4IP1Q8WWV3 RPS27AP18-201ENST00000515536 459 ntBASIC3.91□□□□□ -1.78
RTN4IP1Q8WWV3 RNA5SP360-201ENST00000516555 118 ntBASIC3.91□□□□□ -1.78
RTN4IP1Q8WWV3 OR5AZ1P-201ENST00000527448 943 ntBASIC3.91□□□□□ -1.78
RTN4IP1Q8WWV3 GCSHP4-201ENST00000538792 439 ntBASIC3.91□□□□□ -1.78
RTN4IP1Q8WWV3 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC3.91□□□□□ -1.78
RTN4IP1Q8WWV3 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC3.91□□□□□ -1.78
RTN4IP1Q8WWV3 EDDM3DP-201ENST00000554692 434 ntBASIC3.91□□□□□ -1.78
RTN4IP1Q8WWV3 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC3.91□□□□□ -1.78
RTN4IP1Q8WWV3 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC3.91□□□□□ -1.78
RTN4IP1Q8WWV3 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC3.91□□□□□ -1.78
RTN4IP1Q8WWV3 AC044860.2-201ENST00000561005 179 ntBASIC3.91□□□□□ -1.78
RTN4IP1Q8WWV3 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC3.91□□□□□ -1.78
RTN4IP1Q8WWV3 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
RTN4IP1Q8WWV3 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC3.91□□□□□ -1.78
RTN4IP1Q8WWV3 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC3.91□□□□□ -1.78
RTN4IP1Q8WWV3 AC008966.2-201ENST00000606157 453 ntBASIC3.91□□□□□ -1.78
RTN4IP1Q8WWV3 AC007497.1-201ENST00000610421 561 ntBASIC3.91□□□□□ -1.78
RTN4IP1Q8WWV3 MIR7155-201ENST00000615925 56 ntBASIC3.91□□□□□ -1.78
RTN4IP1Q8WWV3 AC017104.4-201ENST00000636283 1592 ntBASIC3.91□□□□□ -1.78
RTN4IP1Q8WWV3 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.91□□□□□ -1.78
RTN4IP1Q8WWV3 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
RTN4IP1Q8WWV3 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC3.91□□□□□ -1.78
RTN4IP1Q8WWV3 OR51H2P-202ENST00000641424 3046 ntBASIC3.91□□□□□ -1.78
RTN4IP1Q8WWV3 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC3.91□□□□□ -1.78
RTN4IP1Q8WWV3 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC3.91□□□□□ -1.78
RTN4IP1Q8WWV3 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC3.91□□□□□ -1.78
RTN4IP1Q8WWV3 LDHAL6CP-202ENST00000550738 3224 ntBASIC3.91□□□□□ -1.78
RTN4IP1Q8WWV3 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
RTN4IP1Q8WWV3 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
RTN4IP1Q8WWV3 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
RTN4IP1Q8WWV3 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
RTN4IP1Q8WWV3 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
RTN4IP1Q8WWV3 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC3.9□□□□□ -1.78
RTN4IP1Q8WWV3 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
RTN4IP1Q8WWV3 MTCO1P22-201ENST00000604619 1360 ntBASIC3.9□□□□□ -1.78
RTN4IP1Q8WWV3 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
RTN4IP1Q8WWV3 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.9□□□□□ -1.78
RTN4IP1Q8WWV3 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.9□□□□□ -1.78
RTN4IP1Q8WWV3 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
RTN4IP1Q8WWV3 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
RTN4IP1Q8WWV3 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
RTN4IP1Q8WWV3 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
RTN4IP1Q8WWV3 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.9□□□□□ -1.78
RTN4IP1Q8WWV3 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC3.9□□□□□ -1.78
RTN4IP1Q8WWV3 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
RTN4IP1Q8WWV3 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC3.9□□□□□ -1.79
RTN4IP1Q8WWV3 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
RTN4IP1Q8WWV3 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
RTN4IP1Q8WWV3 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
RTN4IP1Q8WWV3 AL589994.1-201ENST00000404962 340 ntBASIC3.9□□□□□ -1.79
RTN4IP1Q8WWV3 RN7SKP278-201ENST00000410504 342 ntBASIC3.9□□□□□ -1.79
RTN4IP1Q8WWV3 ARL6IP1P2-201ENST00000431356 563 ntBASIC3.9□□□□□ -1.79
RTN4IP1Q8WWV3 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC3.9□□□□□ -1.79
RTN4IP1Q8WWV3 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC3.9□□□□□ -1.79
RTN4IP1Q8WWV3 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC3.9□□□□□ -1.79
RTN4IP1Q8WWV3 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC3.9□□□□□ -1.79
RTN4IP1Q8WWV3 PTMAP6-201ENST00000439110 327 ntBASIC3.9□□□□□ -1.79
RTN4IP1Q8WWV3 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC3.9□□□□□ -1.79
RTN4IP1Q8WWV3 SUMO2P1-206ENST00000445436 284 ntBASIC3.9□□□□□ -1.79
RTN4IP1Q8WWV3 AURKAPS2-201ENST00000454983 333 ntBASIC3.9□□□□□ -1.79
RTN4IP1Q8WWV3 AC008410.1-201ENST00000483777 339 ntBASIC3.9□□□□□ -1.79
RTN4IP1Q8WWV3 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
RTN4IP1Q8WWV3 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC3.9□□□□□ -1.79
RTN4IP1Q8WWV3 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC3.9□□□□□ -1.79
RTN4IP1Q8WWV3 AC110775.1-201ENST00000513721 462 ntBASIC3.9□□□□□ -1.79
RTN4IP1Q8WWV3 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
RTN4IP1Q8WWV3 BUD31P1-201ENST00000521828 359 ntBASIC3.9□□□□□ -1.79
RTN4IP1Q8WWV3 MORF4L1P3-201ENST00000525966 950 ntBASIC3.9□□□□□ -1.79
RTN4IP1Q8WWV3 AP000676.2-201ENST00000529711 301 ntBASIC3.9□□□□□ -1.79
RTN4IP1Q8WWV3 AC005000.1-201ENST00000536192 288 ntBASIC3.9□□□□□ -1.79
RTN4IP1Q8WWV3 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC3.9□□□□□ -1.79
RTN4IP1Q8WWV3 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC3.9□□□□□ -1.79
RTN4IP1Q8WWV3 MIR4646-201ENST00000580775 63 ntBASIC3.9□□□□□ -1.79
RTN4IP1Q8WWV3 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC3.9□□□□□ -1.79
RTN4IP1Q8WWV3 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC3.9□□□□□ -1.79
RTN4IP1Q8WWV3 RPL7P50-201ENST00000600588 727 ntBASIC3.9□□□□□ -1.79
RTN4IP1Q8WWV3 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC3.9□□□□□ -1.79
RTN4IP1Q8WWV3 AC133552.5-201ENST00000604266 540 ntBASIC3.9□□□□□ -1.79
RTN4IP1Q8WWV3 AC013244.1-201ENST00000604279 193 ntBASIC3.9□□□□□ -1.79
RTN4IP1Q8WWV3 AC067838.1-201ENST00000606064 577 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms