Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
CCDC112Q8NEF3 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC112Q8NEF3 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.13□□□□□ -1.59
CCDC112Q8NEF3 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC5.13□□□□□ -1.59
CCDC112Q8NEF3 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC112Q8NEF3 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC112Q8NEF3 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC112Q8NEF3 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC112Q8NEF3 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC5.13□□□□□ -1.59
CCDC112Q8NEF3 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.13□□□□□ -1.59
CCDC112Q8NEF3 AL590762.2-201ENST00000395798 571 ntBASIC5.13□□□□□ -1.59
CCDC112Q8NEF3 RPL21P91-201ENST00000429231 479 ntBASIC5.13□□□□□ -1.59
CCDC112Q8NEF3 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.13□□□□□ -1.59
CCDC112Q8NEF3 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.13□□□□□ -1.59
CCDC112Q8NEF3 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC112Q8NEF3 RPL7P61-201ENST00000451721 751 ntBASIC5.13□□□□□ -1.59
CCDC112Q8NEF3 AC092647.2-201ENST00000452998 253 ntBASIC5.13□□□□□ -1.59
CCDC112Q8NEF3 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.13□□□□□ -1.59
CCDC112Q8NEF3 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC5.13□□□□□ -1.59
CCDC112Q8NEF3 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.13□□□□□ -1.59
CCDC112Q8NEF3 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.13□□□□□ -1.59
CCDC112Q8NEF3 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC5.13□□□□□ -1.59
CCDC112Q8NEF3 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.13□□□□□ -1.59
CCDC112Q8NEF3 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC5.13□□□□□ -1.59
CCDC112Q8NEF3 AC091178.1-203ENST00000584586 279 ntBASIC5.13□□□□□ -1.59
CCDC112Q8NEF3 AC005229.3-201ENST00000603438 323 ntBASIC5.13□□□□□ -1.59
CCDC112Q8NEF3 AP001784.1-201ENST00000624107 428 ntBASIC5.13□□□□□ -1.59
CCDC112Q8NEF3 CR381572.2-201ENST00000624852 397 ntBASIC5.13□□□□□ -1.59
CCDC112Q8NEF3 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.13□□□□□ -1.59
CCDC112Q8NEF3 AC105074.1-201ENST00000623380 3095 ntBASIC5.13□□□□□ -1.59
CCDC112Q8NEF3 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.13□□□□□ -1.59
CCDC112Q8NEF3 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.13□□□□□ -1.59
CCDC112Q8NEF3 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC112Q8NEF3 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
CCDC112Q8NEF3 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.13□□□□□ -1.59
CCDC112Q8NEF3 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC112Q8NEF3 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC112Q8NEF3 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC112Q8NEF3 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CCDC112Q8NEF3 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
CCDC112Q8NEF3 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.12□□□□□ -1.59
CCDC112Q8NEF3 RHOT1P2-201ENST00000366423 333 ntBASIC5.12□□□□□ -1.59
CCDC112Q8NEF3 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC112Q8NEF3 RNU1-106P-201ENST00000384382 164 ntBASIC5.12□□□□□ -1.59
CCDC112Q8NEF3 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.12□□□□□ -1.59
CCDC112Q8NEF3 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.12□□□□□ -1.59
CCDC112Q8NEF3 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC5.12□□□□□ -1.59
CCDC112Q8NEF3 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC112Q8NEF3 AC013410.1-201ENST00000436223 1232 ntBASIC5.12□□□□□ -1.59
CCDC112Q8NEF3 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.12□□□□□ -1.59
CCDC112Q8NEF3 AL137845.2-201ENST00000444292 988 ntBASIC5.12□□□□□ -1.59
CCDC112Q8NEF3 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.12□□□□□ -1.59
CCDC112Q8NEF3 NIP7P2-201ENST00000485801 544 ntBASIC5.12□□□□□ -1.59
CCDC112Q8NEF3 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.12□□□□□ -1.59
CCDC112Q8NEF3 AC008897.1-201ENST00000494006 347 ntBASIC5.12□□□□□ -1.59
CCDC112Q8NEF3 AC025445.1-201ENST00000502728 300 ntBASIC5.12□□□□□ -1.59
CCDC112Q8NEF3 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC5.12□□□□□ -1.59
CCDC112Q8NEF3 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.12□□□□□ -1.59
CCDC112Q8NEF3 EDDM3DP-201ENST00000554692 434 ntBASIC5.12□□□□□ -1.59
CCDC112Q8NEF3 AC011447.4-201ENST00000587562 111 ntBASIC5.12□□□□□ -1.59
CCDC112Q8NEF3 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.12□□□□□ -1.59
CCDC112Q8NEF3 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.12□□□□□ -1.59
CCDC112Q8NEF3 AC104785.1-201ENST00000603220 588 ntBASIC5.12□□□□□ -1.59
CCDC112Q8NEF3 AL139395.1-201ENST00000603662 160 ntBASIC5.12□□□□□ -1.59
CCDC112Q8NEF3 EIF3FP1-201ENST00000613970 806 ntBASIC5.12□□□□□ -1.59
CCDC112Q8NEF3 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC112Q8NEF3 TANK-205ENST00000405852 2155 ntTSL 5 BASIC5.12□□□□□ -1.59
CCDC112Q8NEF3 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC112Q8NEF3 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC5.12□□□□□ -1.59
CCDC112Q8NEF3 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC112Q8NEF3 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC112Q8NEF3 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC5.11□□□□□ -1.59
CCDC112Q8NEF3 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
CCDC112Q8NEF3 ATG4AP1-201ENST00000416893 538 ntBASIC5.11□□□□□ -1.59
CCDC112Q8NEF3 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC112Q8NEF3 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC112Q8NEF3 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC5.11□□□□□ -1.59
CCDC112Q8NEF3 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.11□□□□□ -1.59
CCDC112Q8NEF3 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC112Q8NEF3 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC5.11□□□□□ -1.59
CCDC112Q8NEF3 MTND6P5-201ENST00000448266 512 ntBASIC5.11□□□□□ -1.59
CCDC112Q8NEF3 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC112Q8NEF3 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
CCDC112Q8NEF3 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC112Q8NEF3 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC112Q8NEF3 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC112Q8NEF3 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC112Q8NEF3 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.11□□□□□ -1.59
CCDC112Q8NEF3 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC5.11□□□□□ -1.59
CCDC112Q8NEF3 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.11□□□□□ -1.59
CCDC112Q8NEF3 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
CCDC112Q8NEF3 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.11□□□□□ -1.59
CCDC112Q8NEF3 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC112Q8NEF3 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC112Q8NEF3 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.11□□□□□ -1.59
CCDC112Q8NEF3 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC112Q8NEF3 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC112Q8NEF3 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC112Q8NEF3 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC5.1□□□□□ -1.59
CCDC112Q8NEF3 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms