Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC71LQ8N9Z2 ATP5J2P6-201ENST00000565203 266 ntBASIC4.06□□□□□ -1.76
CCDC71LQ8N9Z2 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.06□□□□□ -1.76
CCDC71LQ8N9Z2 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC4.06□□□□□ -1.76
CCDC71LQ8N9Z2 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.06□□□□□ -1.76
CCDC71LQ8N9Z2 MRO-208ENST00000588444 866 ntTSL 3 BASIC4.06□□□□□ -1.76
CCDC71LQ8N9Z2 AC123786.2-201ENST00000603459 275 ntBASIC4.06□□□□□ -1.76
CCDC71LQ8N9Z2 SUGT1P3-202ENST00000604259 383 ntBASIC4.06□□□□□ -1.76
CCDC71LQ8N9Z2 COX6CP4-201ENST00000605798 228 ntBASIC4.06□□□□□ -1.76
CCDC71LQ8N9Z2 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.06□□□□□ -1.76
CCDC71LQ8N9Z2 AC116447.1-201ENST00000613153 453 ntBASIC4.06□□□□□ -1.76
CCDC71LQ8N9Z2 AC140113.4-201ENST00000622087 222 ntBASIC4.06□□□□□ -1.76
CCDC71LQ8N9Z2 AC067852.7-201ENST00000623270 535 ntBASIC4.06□□□□□ -1.76
CCDC71LQ8N9Z2 AC092159.4-201ENST00000624944 550 ntBASIC4.06□□□□□ -1.76
CCDC71LQ8N9Z2 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.06□□□□□ -1.76
CCDC71LQ8N9Z2 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.06□□□□□ -1.76
CCDC71LQ8N9Z2 AC006453.5-201ENST00000636451 619 ntBASIC4.06□□□□□ -1.76
CCDC71LQ8N9Z2 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC71LQ8N9Z2 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC71LQ8N9Z2 UGT2B26P-201ENST00000508672 1613 ntBASIC4.06□□□□□ -1.76
CCDC71LQ8N9Z2 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.06□□□□□ -1.76
CCDC71LQ8N9Z2 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC71LQ8N9Z2 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.06□□□□□ -1.76
CCDC71LQ8N9Z2 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC71LQ8N9Z2 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC71LQ8N9Z2 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
CCDC71LQ8N9Z2 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
CCDC71LQ8N9Z2 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC71LQ8N9Z2 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
CCDC71LQ8N9Z2 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC71LQ8N9Z2 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC71LQ8N9Z2 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC71LQ8N9Z2 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC71LQ8N9Z2 AC108751.5-201ENST00000492880 1336 ntBASIC4.05□□□□□ -1.76
CCDC71LQ8N9Z2 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC71LQ8N9Z2 AL133243.3-201ENST00000617415 3004 ntBASIC4.05□□□□□ -1.76
CCDC71LQ8N9Z2 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC71LQ8N9Z2 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CCDC71LQ8N9Z2 AL589826.1-201ENST00000340697 249 ntBASIC4.05□□□□□ -1.76
CCDC71LQ8N9Z2 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC71LQ8N9Z2 RNA5SP284-201ENST00000384547 118 ntBASIC4.05□□□□□ -1.76
CCDC71LQ8N9Z2 RNU6-146P-201ENST00000384602 108 ntBASIC4.05□□□□□ -1.76
CCDC71LQ8N9Z2 SNORA66-201ENST00000384792 133 ntBASIC4.05□□□□□ -1.76
CCDC71LQ8N9Z2 GSTA12P-201ENST00000402398 508 ntBASIC4.05□□□□□ -1.76
CCDC71LQ8N9Z2 AL121834.1-202ENST00000404494 277 ntBASIC4.05□□□□□ -1.76
CCDC71LQ8N9Z2 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.05□□□□□ -1.76
CCDC71LQ8N9Z2 AC019050.1-201ENST00000418508 492 ntBASIC4.05□□□□□ -1.76
CCDC71LQ8N9Z2 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.05□□□□□ -1.76
CCDC71LQ8N9Z2 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC71LQ8N9Z2 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC71LQ8N9Z2 RPS3P2-201ENST00000421346 701 ntBASIC4.05□□□□□ -1.76
CCDC71LQ8N9Z2 SEC63P1-201ENST00000425785 1258 ntBASIC4.05□□□□□ -1.76
CCDC71LQ8N9Z2 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.05□□□□□ -1.76
CCDC71LQ8N9Z2 RWDD4P2-201ENST00000426392 563 ntBASIC4.05□□□□□ -1.76
CCDC71LQ8N9Z2 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC71LQ8N9Z2 ARL4AP4-201ENST00000434170 518 ntBASIC4.05□□□□□ -1.76
CCDC71LQ8N9Z2 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.05□□□□□ -1.76
CCDC71LQ8N9Z2 CYCSP12-201ENST00000437729 300 ntBASIC4.05□□□□□ -1.76
CCDC71LQ8N9Z2 VN1R48P-201ENST00000448149 1036 ntBASIC4.05□□□□□ -1.76
CCDC71LQ8N9Z2 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC4.05□□□□□ -1.76
CCDC71LQ8N9Z2 OR52E7P-201ENST00000452394 933 ntBASIC4.05□□□□□ -1.76
CCDC71LQ8N9Z2 AC005008.1-201ENST00000456151 612 ntBASIC4.05□□□□□ -1.76
CCDC71LQ8N9Z2 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC71LQ8N9Z2 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.05□□□□□ -1.76
CCDC71LQ8N9Z2 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC71LQ8N9Z2 RPL35AP19-201ENST00000469425 329 ntBASIC4.05□□□□□ -1.76
CCDC71LQ8N9Z2 RPL23AP65-201ENST00000475608 468 ntBASIC4.05□□□□□ -1.76
CCDC71LQ8N9Z2 RN7SL41P-201ENST00000476144 297 ntBASIC4.05□□□□□ -1.76
CCDC71LQ8N9Z2 RN7SL170P-201ENST00000487098 295 ntBASIC4.05□□□□□ -1.76
CCDC71LQ8N9Z2 RWDD4P1-201ENST00000488019 565 ntBASIC4.05□□□□□ -1.76
CCDC71LQ8N9Z2 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC4.05□□□□□ -1.76
CCDC71LQ8N9Z2 AC021146.3-201ENST00000511911 260 ntBASIC4.05□□□□□ -1.76
CCDC71LQ8N9Z2 RNA5SP497-201ENST00000516081 97 ntBASIC4.05□□□□□ -1.76
CCDC71LQ8N9Z2 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC71LQ8N9Z2 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC71LQ8N9Z2 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC71LQ8N9Z2 AC126177.5-201ENST00000549599 178 ntBASIC4.05□□□□□ -1.76
CCDC71LQ8N9Z2 NMNAT1P1-201ENST00000554095 876 ntBASIC4.05□□□□□ -1.76
CCDC71LQ8N9Z2 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC71LQ8N9Z2 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.05□□□□□ -1.76
CCDC71LQ8N9Z2 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC4.05□□□□□ -1.76
CCDC71LQ8N9Z2 TVP23CP2-201ENST00000571473 623 ntBASIC4.05□□□□□ -1.76
CCDC71LQ8N9Z2 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC4.05□□□□□ -1.76
CCDC71LQ8N9Z2 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC4.05□□□□□ -1.76
CCDC71LQ8N9Z2 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC4.05□□□□□ -1.76
CCDC71LQ8N9Z2 MTCO2P22-201ENST00000603246 681 ntBASIC4.05□□□□□ -1.76
CCDC71LQ8N9Z2 AC100767.2-201ENST00000604840 693 ntBASIC4.05□□□□□ -1.76
CCDC71LQ8N9Z2 AC084036.1-201ENST00000609190 508 ntBASIC4.05□□□□□ -1.76
CCDC71LQ8N9Z2 AC074276.2-201ENST00000619891 348 ntBASIC4.05□□□□□ -1.76
CCDC71LQ8N9Z2 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.05□□□□□ -1.76
CCDC71LQ8N9Z2 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.05□□□□□ -1.76
CCDC71LQ8N9Z2 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.05□□□□□ -1.76
CCDC71LQ8N9Z2 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC71LQ8N9Z2 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC71LQ8N9Z2 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
CCDC71LQ8N9Z2 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC71LQ8N9Z2 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CCDC71LQ8N9Z2 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.05□□□□□ -1.76
CCDC71LQ8N9Z2 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CCDC71LQ8N9Z2 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms