Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
TTC9CQ8N5M4 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
TTC9CQ8N5M4 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC3.72□□□□□ -1.81
TTC9CQ8N5M4 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
TTC9CQ8N5M4 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
TTC9CQ8N5M4 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TTC9CQ8N5M4 AC093535.2-201ENST00000624769 2326 ntBASIC3.72□□□□□ -1.81
TTC9CQ8N5M4 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TTC9CQ8N5M4 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TTC9CQ8N5M4 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
TTC9CQ8N5M4 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TTC9CQ8N5M4 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
TTC9CQ8N5M4 OR56B2P-201ENST00000317102 954 ntBASIC3.72□□□□□ -1.81
TTC9CQ8N5M4 GCNT6-201ENST00000379591 934 ntBASIC3.72□□□□□ -1.81
TTC9CQ8N5M4 AL645733.1-201ENST00000402250 217 ntBASIC3.72□□□□□ -1.81
TTC9CQ8N5M4 AL160275.2-201ENST00000412010 394 ntBASIC3.72□□□□□ -1.81
TTC9CQ8N5M4 AL591848.1-201ENST00000413092 322 ntBASIC3.72□□□□□ -1.81
TTC9CQ8N5M4 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC3.72□□□□□ -1.81
TTC9CQ8N5M4 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC3.72□□□□□ -1.81
TTC9CQ8N5M4 RPS27P18-201ENST00000431701 247 ntBASIC3.72□□□□□ -1.81
TTC9CQ8N5M4 NRBF2P3-201ENST00000432731 865 ntBASIC3.72□□□□□ -1.81
TTC9CQ8N5M4 VN1R54P-201ENST00000435210 1049 ntBASIC3.72□□□□□ -1.81
TTC9CQ8N5M4 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC3.72□□□□□ -1.81
TTC9CQ8N5M4 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC3.72□□□□□ -1.81
TTC9CQ8N5M4 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
TTC9CQ8N5M4 RPL31P44-201ENST00000447680 377 ntBASIC3.72□□□□□ -1.81
TTC9CQ8N5M4 AC010733.1-201ENST00000451515 401 ntBASIC3.72□□□□□ -1.81
TTC9CQ8N5M4 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC3.72□□□□□ -1.81
TTC9CQ8N5M4 AC090142.1-201ENST00000465776 462 ntBASIC3.72□□□□□ -1.81
TTC9CQ8N5M4 RN7SL329P-201ENST00000467740 299 ntBASIC3.72□□□□□ -1.81
TTC9CQ8N5M4 SCARNA22-201ENST00000503991 125 ntBASIC3.72□□□□□ -1.81
TTC9CQ8N5M4 AC091868.1-201ENST00000508746 304 ntBASIC3.72□□□□□ -1.81
TTC9CQ8N5M4 AC110775.1-201ENST00000513721 462 ntBASIC3.72□□□□□ -1.81
TTC9CQ8N5M4 UBE2Q2P10-201ENST00000514854 900 ntBASIC3.72□□□□□ -1.81
TTC9CQ8N5M4 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC3.72□□□□□ -1.81
TTC9CQ8N5M4 AC008126.1-201ENST00000549019 480 ntBASIC3.72□□□□□ -1.81
TTC9CQ8N5M4 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC3.72□□□□□ -1.81
TTC9CQ8N5M4 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC3.72□□□□□ -1.81
TTC9CQ8N5M4 AL391358.1-201ENST00000605342 190 ntBASIC3.72□□□□□ -1.81
TTC9CQ8N5M4 uc_338.18-201ENST00000615451 175 ntBASIC3.72□□□□□ -1.81
TTC9CQ8N5M4 WDR75-207ENST00000631047 270 ntTSL 5 BASIC3.72□□□□□ -1.81
TTC9CQ8N5M4 AL442639.1-201ENST00000625030 1899 ntBASIC3.72□□□□□ -1.81
TTC9CQ8N5M4 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC3.72□□□□□ -1.81
TTC9CQ8N5M4 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.72□□□□□ -1.81
TTC9CQ8N5M4 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
TTC9CQ8N5M4 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC3.72□□□□□ -1.81
TTC9CQ8N5M4 SDAD1P1-202ENST00000524156 2051 ntBASIC3.72□□□□□ -1.81
TTC9CQ8N5M4 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
TTC9CQ8N5M4 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
TTC9CQ8N5M4 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC3.72□□□□□ -1.81
TTC9CQ8N5M4 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC3.72□□□□□ -1.81
TTC9CQ8N5M4 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC3.72□□□□□ -1.81
TTC9CQ8N5M4 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC3.72□□□□□ -1.81
TTC9CQ8N5M4 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
TTC9CQ8N5M4 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
TTC9CQ8N5M4 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
TTC9CQ8N5M4 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.71□□□□□ -1.82
TTC9CQ8N5M4 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
TTC9CQ8N5M4 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC3.71□□□□□ -1.82
TTC9CQ8N5M4 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC3.71□□□□□ -1.82
TTC9CQ8N5M4 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
TTC9CQ8N5M4 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
TTC9CQ8N5M4 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
TTC9CQ8N5M4 RN7SKP115-201ENST00000363177 317 ntBASIC3.71□□□□□ -1.82
TTC9CQ8N5M4 RNU1-82P-201ENST00000390851 165 ntBASIC3.71□□□□□ -1.82
TTC9CQ8N5M4 AL109941.1-201ENST00000401925 229 ntBASIC3.71□□□□□ -1.82
TTC9CQ8N5M4 RNA5SP113-201ENST00000410486 84 ntBASIC3.71□□□□□ -1.82
TTC9CQ8N5M4 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC3.71□□□□□ -1.82
TTC9CQ8N5M4 PSMD10P3-201ENST00000437000 448 ntBASIC3.71□□□□□ -1.82
TTC9CQ8N5M4 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC3.71□□□□□ -1.82
TTC9CQ8N5M4 ARL4AP3-201ENST00000441452 574 ntBASIC3.71□□□□□ -1.82
TTC9CQ8N5M4 AL357520.1-201ENST00000441557 453 ntBASIC3.71□□□□□ -1.82
TTC9CQ8N5M4 AC073648.4-201ENST00000442655 781 ntBASIC3.71□□□□□ -1.82
TTC9CQ8N5M4 GEMIN8P3-201ENST00000445417 720 ntBASIC3.71□□□□□ -1.82
TTC9CQ8N5M4 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC3.71□□□□□ -1.82
TTC9CQ8N5M4 H2AFZP5-201ENST00000446960 382 ntBASIC3.71□□□□□ -1.82
TTC9CQ8N5M4 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC3.71□□□□□ -1.82
TTC9CQ8N5M4 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC3.71□□□□□ -1.82
TTC9CQ8N5M4 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
TTC9CQ8N5M4 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC3.71□□□□□ -1.82
TTC9CQ8N5M4 AC110749.1-201ENST00000462007 357 ntBASIC3.71□□□□□ -1.82
TTC9CQ8N5M4 AC108751.2-201ENST00000469993 231 ntBASIC3.71□□□□□ -1.82
TTC9CQ8N5M4 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC3.71□□□□□ -1.82
TTC9CQ8N5M4 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC3.71□□□□□ -1.82
TTC9CQ8N5M4 NDUFB5P1-201ENST00000508134 564 ntBASIC3.71□□□□□ -1.82
TTC9CQ8N5M4 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
TTC9CQ8N5M4 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC3.71□□□□□ -1.82
TTC9CQ8N5M4 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC3.71□□□□□ -1.82
TTC9CQ8N5M4 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC3.71□□□□□ -1.82
TTC9CQ8N5M4 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC3.71□□□□□ -1.82
TTC9CQ8N5M4 AC044860.2-201ENST00000561005 179 ntBASIC3.71□□□□□ -1.82
TTC9CQ8N5M4 AC009117.1-201ENST00000563948 554 ntBASIC3.71□□□□□ -1.82
TTC9CQ8N5M4 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC3.71□□□□□ -1.82
TTC9CQ8N5M4 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC3.71□□□□□ -1.82
TTC9CQ8N5M4 AC005520.3-201ENST00000602874 370 ntBASIC3.71□□□□□ -1.82
TTC9CQ8N5M4 COX6CP4-201ENST00000605798 228 ntBASIC3.71□□□□□ -1.82
TTC9CQ8N5M4 OR7A19P-201ENST00000608051 733 ntBASIC3.71□□□□□ -1.82
TTC9CQ8N5M4 AC133644.2-201ENST00000608142 540 ntBASIC3.71□□□□□ -1.82
TTC9CQ8N5M4 AC211433.2-201ENST00000608433 387 ntBASIC3.71□□□□□ -1.82
TTC9CQ8N5M4 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms