Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC50Q8IVM0 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC50Q8IVM0 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC4.97□□□□□ -1.61
CCDC50Q8IVM0 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC50Q8IVM0 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC50Q8IVM0 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC50Q8IVM0 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.97□□□□□ -1.61
CCDC50Q8IVM0 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.97□□□□□ -1.61
CCDC50Q8IVM0 RNU4-4P-201ENST00000364588 130 ntBASIC4.97□□□□□ -1.61
CCDC50Q8IVM0 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
CCDC50Q8IVM0 AL645733.1-201ENST00000402250 217 ntBASIC4.97□□□□□ -1.61
CCDC50Q8IVM0 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC50Q8IVM0 RNA5SP104-201ENST00000410989 118 ntBASIC4.97□□□□□ -1.61
CCDC50Q8IVM0 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC4.97□□□□□ -1.61
CCDC50Q8IVM0 LINC00993-201ENST00000420453 540 ntBASIC4.97□□□□□ -1.61
CCDC50Q8IVM0 RPL7L1P1-201ENST00000448259 785 ntBASIC4.97□□□□□ -1.61
CCDC50Q8IVM0 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC4.97□□□□□ -1.61
CCDC50Q8IVM0 RNA5SP154-201ENST00000516193 111 ntBASIC4.97□□□□□ -1.61
CCDC50Q8IVM0 OR10G5P-201ENST00000532733 358 ntBASIC4.97□□□□□ -1.61
CCDC50Q8IVM0 AC133555.2-201ENST00000550213 292 ntBASIC4.97□□□□□ -1.61
CCDC50Q8IVM0 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.97□□□□□ -1.61
CCDC50Q8IVM0 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
CCDC50Q8IVM0 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.97□□□□□ -1.61
CCDC50Q8IVM0 SLC25A36P1-201ENST00000590111 465 ntBASIC4.97□□□□□ -1.61
CCDC50Q8IVM0 AC020910.3-201ENST00000603701 874 ntBASIC4.97□□□□□ -1.61
CCDC50Q8IVM0 COX6CP4-201ENST00000605798 228 ntBASIC4.97□□□□□ -1.61
CCDC50Q8IVM0 AP001521.2-201ENST00000608772 546 ntBASIC4.97□□□□□ -1.61
CCDC50Q8IVM0 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.97□□□□□ -1.61
CCDC50Q8IVM0 MIR7154-201ENST00000620673 73 ntBASIC4.97□□□□□ -1.61
CCDC50Q8IVM0 AC011815.3-201ENST00000624194 473 ntBASIC4.97□□□□□ -1.61
CCDC50Q8IVM0 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.97□□□□□ -1.61
CCDC50Q8IVM0 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.97□□□□□ -1.61
CCDC50Q8IVM0 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.97□□□□□ -1.61
CCDC50Q8IVM0 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC50Q8IVM0 THAP12P8-201ENST00000447914 2115 ntBASIC4.97□□□□□ -1.61
CCDC50Q8IVM0 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC50Q8IVM0 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.61
CCDC50Q8IVM0 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.61
CCDC50Q8IVM0 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.96□□□□□ -1.62
CCDC50Q8IVM0 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC4.96□□□□□ -1.62
CCDC50Q8IVM0 GCNT6-201ENST00000379591 934 ntBASIC4.96□□□□□ -1.62
CCDC50Q8IVM0 ARL4AP5-201ENST00000404372 599 ntBASIC4.96□□□□□ -1.62
CCDC50Q8IVM0 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.96□□□□□ -1.62
CCDC50Q8IVM0 AC098592.2-201ENST00000413158 265 ntBASIC4.96□□□□□ -1.62
CCDC50Q8IVM0 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC4.96□□□□□ -1.62
CCDC50Q8IVM0 AC096644.3-201ENST00000416788 338 ntBASIC4.96□□□□□ -1.62
CCDC50Q8IVM0 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC4.96□□□□□ -1.62
CCDC50Q8IVM0 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC4.96□□□□□ -1.62
CCDC50Q8IVM0 RPS12P5-201ENST00000423449 371 ntBASIC4.96□□□□□ -1.62
CCDC50Q8IVM0 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.96□□□□□ -1.62
CCDC50Q8IVM0 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC50Q8IVM0 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.96□□□□□ -1.62
CCDC50Q8IVM0 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.96□□□□□ -1.62
CCDC50Q8IVM0 AC010733.1-201ENST00000451515 401 ntBASIC4.96□□□□□ -1.62
CCDC50Q8IVM0 RPL37AP8-201ENST00000494116 276 ntBASIC4.96□□□□□ -1.62
CCDC50Q8IVM0 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.96□□□□□ -1.62
CCDC50Q8IVM0 IGLV2-28-201ENST00000520681 304 ntBASIC4.96□□□□□ -1.62
CCDC50Q8IVM0 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC4.96□□□□□ -1.62
CCDC50Q8IVM0 AL121834.1-201ENST00000572284 509 ntBASIC4.96□□□□□ -1.62
CCDC50Q8IVM0 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.96□□□□□ -1.62
CCDC50Q8IVM0 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC4.96□□□□□ -1.62
CCDC50Q8IVM0 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.96□□□□□ -1.62
CCDC50Q8IVM0 AC007497.1-201ENST00000610421 561 ntBASIC4.96□□□□□ -1.62
CCDC50Q8IVM0 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.96□□□□□ -1.62
CCDC50Q8IVM0 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.96□□□□□ -1.62
CCDC50Q8IVM0 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.96□□□□□ -1.62
CCDC50Q8IVM0 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC50Q8IVM0 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
CCDC50Q8IVM0 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC50Q8IVM0 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC50Q8IVM0 AL606537.1-201ENST00000607258 2011 ntBASIC4.96□□□□□ -1.62
CCDC50Q8IVM0 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.96□□□□□ -1.62
CCDC50Q8IVM0 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC50Q8IVM0 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
CCDC50Q8IVM0 SMG1P6-201ENST00000532337 2930 ntBASIC4.95□□□□□ -1.62
CCDC50Q8IVM0 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.95□□□□□ -1.62
CCDC50Q8IVM0 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC50Q8IVM0 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC50Q8IVM0 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
CCDC50Q8IVM0 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
CCDC50Q8IVM0 RN7SKP95-201ENST00000362860 303 ntBASIC4.95□□□□□ -1.62
CCDC50Q8IVM0 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CCDC50Q8IVM0 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CCDC50Q8IVM0 RNU1-82P-201ENST00000390851 165 ntBASIC4.95□□□□□ -1.62
CCDC50Q8IVM0 CHEK2P3-201ENST00000416118 248 ntBASIC4.95□□□□□ -1.62
CCDC50Q8IVM0 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.95□□□□□ -1.62
CCDC50Q8IVM0 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC4.95□□□□□ -1.62
CCDC50Q8IVM0 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC4.95□□□□□ -1.62
CCDC50Q8IVM0 HMGB3P9-201ENST00000441799 583 ntBASIC4.95□□□□□ -1.62
CCDC50Q8IVM0 AC112498.1-201ENST00000444401 332 ntBASIC4.95□□□□□ -1.62
CCDC50Q8IVM0 AC073850.1-201ENST00000449243 255 ntBASIC4.95□□□□□ -1.62
CCDC50Q8IVM0 RPSAP50-201ENST00000481955 852 ntBASIC4.95□□□□□ -1.62
CCDC50Q8IVM0 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC4.95□□□□□ -1.62
CCDC50Q8IVM0 AC006499.3-201ENST00000506077 748 ntBASIC4.95□□□□□ -1.62
CCDC50Q8IVM0 AC011411.1-201ENST00000509592 876 ntBASIC4.95□□□□□ -1.62
CCDC50Q8IVM0 MORF4L1P3-201ENST00000525966 950 ntBASIC4.95□□□□□ -1.62
CCDC50Q8IVM0 AC069240.1-201ENST00000548774 375 ntBASIC4.95□□□□□ -1.62
CCDC50Q8IVM0 AL121839.1-201ENST00000556233 1185 ntBASIC4.95□□□□□ -1.62
CCDC50Q8IVM0 AC084759.1-201ENST00000561168 290 ntBASIC4.95□□□□□ -1.62
CCDC50Q8IVM0 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms