Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
NUDCD3Q8IVD9 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
NUDCD3Q8IVD9 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
NUDCD3Q8IVD9 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
NUDCD3Q8IVD9 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
NUDCD3Q8IVD9 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.63□□□□□ -1.67
NUDCD3Q8IVD9 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.63□□□□□ -1.67
NUDCD3Q8IVD9 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
NUDCD3Q8IVD9 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.63□□□□□ -1.67
NUDCD3Q8IVD9 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
NUDCD3Q8IVD9 RNU6-697P-201ENST00000363348 107 ntBASIC4.63□□□□□ -1.67
NUDCD3Q8IVD9 OR13C3-201ENST00000374781 1108 ntBASIC4.63□□□□□ -1.67
NUDCD3Q8IVD9 U3.36-201ENST00000408418 213 ntBASIC4.63□□□□□ -1.67
NUDCD3Q8IVD9 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC4.63□□□□□ -1.67
NUDCD3Q8IVD9 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.63□□□□□ -1.67
NUDCD3Q8IVD9 AL645608.4-201ENST00000423619 154 ntBASIC4.63□□□□□ -1.67
NUDCD3Q8IVD9 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
NUDCD3Q8IVD9 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.63□□□□□ -1.67
NUDCD3Q8IVD9 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.63□□□□□ -1.67
NUDCD3Q8IVD9 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.63□□□□□ -1.67
NUDCD3Q8IVD9 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC4.63□□□□□ -1.67
NUDCD3Q8IVD9 RN7SL809P-201ENST00000482040 297 ntBASIC4.63□□□□□ -1.67
NUDCD3Q8IVD9 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC4.63□□□□□ -1.67
NUDCD3Q8IVD9 AF186190.1-201ENST00000517470 480 ntBASIC4.63□□□□□ -1.67
NUDCD3Q8IVD9 AC133555.2-201ENST00000550213 292 ntBASIC4.63□□□□□ -1.67
NUDCD3Q8IVD9 OR11J2P-201ENST00000555298 907 ntBASIC4.63□□□□□ -1.67
NUDCD3Q8IVD9 SULT1C2P2-201ENST00000562517 294 ntBASIC4.63□□□□□ -1.67
NUDCD3Q8IVD9 RN7SL802P-201ENST00000577858 299 ntBASIC4.63□□□□□ -1.67
NUDCD3Q8IVD9 AC091178.1-203ENST00000584586 279 ntBASIC4.63□□□□□ -1.67
NUDCD3Q8IVD9 AC022726.1-201ENST00000587475 207 ntBASIC4.63□□□□□ -1.67
NUDCD3Q8IVD9 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.63□□□□□ -1.67
NUDCD3Q8IVD9 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.63□□□□□ -1.67
NUDCD3Q8IVD9 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.63□□□□□ -1.67
NUDCD3Q8IVD9 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.63□□□□□ -1.67
NUDCD3Q8IVD9 AL512329.2-201ENST00000607350 548 ntBASIC4.63□□□□□ -1.67
NUDCD3Q8IVD9 AP001521.2-201ENST00000608772 546 ntBASIC4.63□□□□□ -1.67
NUDCD3Q8IVD9 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.63□□□□□ -1.67
NUDCD3Q8IVD9 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.63□□□□□ -1.67
NUDCD3Q8IVD9 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.63□□□□□ -1.67
NUDCD3Q8IVD9 MIR4302-201ENST00000638058 60 ntBASIC4.63□□□□□ -1.67
NUDCD3Q8IVD9 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
NUDCD3Q8IVD9 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
NUDCD3Q8IVD9 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
NUDCD3Q8IVD9 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
NUDCD3Q8IVD9 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
NUDCD3Q8IVD9 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
NUDCD3Q8IVD9 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.62□□□□□ -1.67
NUDCD3Q8IVD9 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
NUDCD3Q8IVD9 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
NUDCD3Q8IVD9 RN7SKP115-201ENST00000363177 317 ntBASIC4.62□□□□□ -1.67
NUDCD3Q8IVD9 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
NUDCD3Q8IVD9 AC114755.2-201ENST00000413520 361 ntBASIC4.62□□□□□ -1.67
NUDCD3Q8IVD9 NPM1P4-201ENST00000414095 812 ntBASIC4.62□□□□□ -1.67
NUDCD3Q8IVD9 GJA6P-201ENST00000415117 1042 ntBASIC4.62□□□□□ -1.67
NUDCD3Q8IVD9 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC4.62□□□□□ -1.67
NUDCD3Q8IVD9 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.62□□□□□ -1.67
NUDCD3Q8IVD9 GLUD1P9-201ENST00000420997 1173 ntBASIC4.62□□□□□ -1.67
NUDCD3Q8IVD9 AL590609.2-201ENST00000421430 368 ntBASIC4.62□□□□□ -1.67
NUDCD3Q8IVD9 GTF2IP2-201ENST00000424290 697 ntBASIC4.62□□□□□ -1.67
NUDCD3Q8IVD9 RPL21P91-201ENST00000429231 479 ntBASIC4.62□□□□□ -1.67
NUDCD3Q8IVD9 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.62□□□□□ -1.67
NUDCD3Q8IVD9 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.62□□□□□ -1.67
NUDCD3Q8IVD9 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
NUDCD3Q8IVD9 AL138787.1-202ENST00000437804 898 ntBASIC4.62□□□□□ -1.67
NUDCD3Q8IVD9 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.62□□□□□ -1.67
NUDCD3Q8IVD9 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC4.62□□□□□ -1.67
NUDCD3Q8IVD9 SLC25A18P1-201ENST00000449385 454 ntBASIC4.62□□□□□ -1.67
NUDCD3Q8IVD9 FAR2P1-206ENST00000449736 709 ntBASIC4.62□□□□□ -1.67
NUDCD3Q8IVD9 AC234781.3-201ENST00000452540 973 ntBASIC4.62□□□□□ -1.67
NUDCD3Q8IVD9 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.62□□□□□ -1.67
NUDCD3Q8IVD9 SEPT14P1-201ENST00000458703 648 ntBASIC4.62□□□□□ -1.67
NUDCD3Q8IVD9 AC025164.1-201ENST00000496249 478 ntBASIC4.62□□□□□ -1.67
NUDCD3Q8IVD9 AC106872.4-201ENST00000510050 523 ntBASIC4.62□□□□□ -1.67
NUDCD3Q8IVD9 snoU109.6-201ENST00000516831 118 ntBASIC4.62□□□□□ -1.67
NUDCD3Q8IVD9 BUD31P1-201ENST00000521828 359 ntBASIC4.62□□□□□ -1.67
NUDCD3Q8IVD9 AC138473.1-201ENST00000605717 526 ntBASIC4.62□□□□□ -1.67
NUDCD3Q8IVD9 AC131238.1-201ENST00000617135 328 ntBASIC4.62□□□□□ -1.67
NUDCD3Q8IVD9 LINC00901.1-201ENST00000617252 152 ntBASIC4.62□□□□□ -1.67
NUDCD3Q8IVD9 AL023881.1-201ENST00000621088 301 ntBASIC4.62□□□□□ -1.67
NUDCD3Q8IVD9 AC079298.2-201ENST00000623885 459 ntBASIC4.62□□□□□ -1.67
NUDCD3Q8IVD9 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.62□□□□□ -1.67
NUDCD3Q8IVD9 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
NUDCD3Q8IVD9 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.62□□□□□ -1.67
NUDCD3Q8IVD9 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
NUDCD3Q8IVD9 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
NUDCD3Q8IVD9 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
NUDCD3Q8IVD9 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.62□□□□□ -1.67
NUDCD3Q8IVD9 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.62□□□□□ -1.67
NUDCD3Q8IVD9 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
NUDCD3Q8IVD9 VPS35P1-201ENST00000563400 1518 ntBASIC4.62□□□□□ -1.67
NUDCD3Q8IVD9 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
NUDCD3Q8IVD9 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.61□□□□□ -1.67
NUDCD3Q8IVD9 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NUDCD3Q8IVD9 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.61□□□□□ -1.67
NUDCD3Q8IVD9 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
NUDCD3Q8IVD9 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
NUDCD3Q8IVD9 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
NUDCD3Q8IVD9 ZFRP1-201ENST00000457579 2970 ntBASIC4.61□□□□□ -1.67
NUDCD3Q8IVD9 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
NUDCD3Q8IVD9 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms