Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 PANDAR-201ENST00000629595 1506 ntBASIC3.3□□□□□ -1.88
SYCNQ0VAF6 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SYCNQ0VAF6 ALB-219ENST00000621085 1418 ntTSL 5 BASIC3.3□□□□□ -1.88
SYCNQ0VAF6 AC009501.3-201ENST00000605001 1352 ntBASIC3.3□□□□□ -1.88
SYCNQ0VAF6 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SYCNQ0VAF6 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SYCNQ0VAF6 SNORA73.1-201ENST00000363107 205 ntBASIC3.3□□□□□ -1.88
SYCNQ0VAF6 SNORA70.10-201ENST00000384515 134 ntBASIC3.3□□□□□ -1.88
SYCNQ0VAF6 SNORA66-201ENST00000384792 133 ntBASIC3.3□□□□□ -1.88
SYCNQ0VAF6 MIR223-201ENST00000385204 110 ntBASIC3.3□□□□□ -1.88
SYCNQ0VAF6 Z97832.1-201ENST00000402490 328 ntBASIC3.3□□□□□ -1.88
SYCNQ0VAF6 RPS27AP11-201ENST00000402798 447 ntBASIC3.3□□□□□ -1.88
SYCNQ0VAF6 RN7SKP16-201ENST00000410180 299 ntBASIC3.3□□□□□ -1.88
SYCNQ0VAF6 DDX39BP1-205ENST00000422507 192 ntBASIC3.3□□□□□ -1.88
SYCNQ0VAF6 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC3.3□□□□□ -1.88
SYCNQ0VAF6 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC3.3□□□□□ -1.88
SYCNQ0VAF6 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC3.3□□□□□ -1.88
SYCNQ0VAF6 DPY19L1P2-201ENST00000426647 915 ntBASIC3.3□□□□□ -1.88
SYCNQ0VAF6 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC3.3□□□□□ -1.88
SYCNQ0VAF6 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC3.3□□□□□ -1.88
SYCNQ0VAF6 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC3.3□□□□□ -1.88
SYCNQ0VAF6 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC3.3□□□□□ -1.88
SYCNQ0VAF6 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC3.3□□□□□ -1.88
SYCNQ0VAF6 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC3.3□□□□□ -1.88
SYCNQ0VAF6 AL691517.1-201ENST00000440833 1235 ntBASIC3.3□□□□□ -1.88
SYCNQ0VAF6 FHP1-201ENST00000442741 703 ntBASIC3.3□□□□□ -1.88
SYCNQ0VAF6 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC3.3□□□□□ -1.88
SYCNQ0VAF6 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SYCNQ0VAF6 HMGB1P4-201ENST00000455362 567 ntBASIC3.3□□□□□ -1.88
SYCNQ0VAF6 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC3.3□□□□□ -1.88
SYCNQ0VAF6 RN7SL30P-201ENST00000488416 306 ntBASIC3.3□□□□□ -1.88
SYCNQ0VAF6 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC3.3□□□□□ -1.88
SYCNQ0VAF6 AC010350.1-201ENST00000504908 231 ntBASIC3.3□□□□□ -1.88
SYCNQ0VAF6 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC3.3□□□□□ -1.88
SYCNQ0VAF6 ATP5LP3-201ENST00000514223 304 ntBASIC3.3□□□□□ -1.88
SYCNQ0VAF6 RNU6-1004P-201ENST00000516584 111 ntBASIC3.3□□□□□ -1.88
SYCNQ0VAF6 MAL2-208ENST00000523307 556 ntTSL 4 BASIC3.3□□□□□ -1.88
SYCNQ0VAF6 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC3.3□□□□□ -1.88
SYCNQ0VAF6 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC3.3□□□□□ -1.88
SYCNQ0VAF6 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC3.3□□□□□ -1.88
SYCNQ0VAF6 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC3.3□□□□□ -1.88
SYCNQ0VAF6 AC107918.3-201ENST00000533272 382 ntBASIC3.3□□□□□ -1.88
SYCNQ0VAF6 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC3.3□□□□□ -1.88
SYCNQ0VAF6 AC008083.2-201ENST00000546707 476 ntBASIC3.3□□□□□ -1.88
SYCNQ0VAF6 DYNLL1P4-201ENST00000549314 266 ntBASIC3.3□□□□□ -1.88
SYCNQ0VAF6 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC3.3□□□□□ -1.88
SYCNQ0VAF6 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC3.3□□□□□ -1.88
SYCNQ0VAF6 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SYCNQ0VAF6 AC027176.2-201ENST00000559166 746 ntBASIC3.3□□□□□ -1.88
SYCNQ0VAF6 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC3.3□□□□□ -1.88
SYCNQ0VAF6 SS18L2P2-201ENST00000583960 235 ntBASIC3.3□□□□□ -1.88
SYCNQ0VAF6 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC3.3□□□□□ -1.88
SYCNQ0VAF6 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC3.3□□□□□ -1.88
SYCNQ0VAF6 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC3.3□□□□□ -1.88
SYCNQ0VAF6 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC3.3□□□□□ -1.88
SYCNQ0VAF6 AC087283.1-201ENST00000604029 1074 ntBASIC3.3□□□□□ -1.88
SYCNQ0VAF6 IMMP1LP3-201ENST00000604197 224 ntBASIC3.3□□□□□ -1.88
SYCNQ0VAF6 AL049844.2-201ENST00000604280 628 ntBASIC3.3□□□□□ -1.88
SYCNQ0VAF6 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.3□□□□□ -1.88
SYCNQ0VAF6 AP000864.1-201ENST00000609424 650 ntBASIC3.3□□□□□ -1.88
SYCNQ0VAF6 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC3.3□□□□□ -1.88
SYCNQ0VAF6 AC019206.1-201ENST00000621938 425 ntBASIC3.3□□□□□ -1.88
SYCNQ0VAF6 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC3.3□□□□□ -1.88
SYCNQ0VAF6 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SYCNQ0VAF6 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SYCNQ0VAF6 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
SYCNQ0VAF6 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
SYCNQ0VAF6 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SYCNQ0VAF6 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC3.3□□□□□ -1.88
SYCNQ0VAF6 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC3.3□□□□□ -1.88
SYCNQ0VAF6 LINC01109-201ENST00000603837 3081 ntBASIC3.3□□□□□ -1.88
SYCNQ0VAF6 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC3.3□□□□□ -1.88
SYCNQ0VAF6 AC107027.3-201ENST00000565095 3473 ntBASIC3.29□□□□□ -1.88
SYCNQ0VAF6 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC3.29□□□□□ -1.88
SYCNQ0VAF6 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SYCNQ0VAF6 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC3.29□□□□□ -1.88
SYCNQ0VAF6 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC3.29□□□□□ -1.88
SYCNQ0VAF6 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
SYCNQ0VAF6 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
SYCNQ0VAF6 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC3.29□□□□□ -1.88
SYCNQ0VAF6 EEF1A1P36-201ENST00000427807 1351 ntBASIC3.29□□□□□ -1.88
SYCNQ0VAF6 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
SYCNQ0VAF6 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
SYCNQ0VAF6 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC3.29□□□□□ -1.88
SYCNQ0VAF6 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
SYCNQ0VAF6 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC3.29□□□□□ -1.88
SYCNQ0VAF6 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
SYCNQ0VAF6 IL6-203ENST00000401651 539 ntTSL 2 BASIC3.29□□□□□ -1.88
SYCNQ0VAF6 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
SYCNQ0VAF6 DNAJA1P4-201ENST00000406473 1166 ntBASIC3.29□□□□□ -1.88
SYCNQ0VAF6 AL512422.1-201ENST00000407033 553 ntBASIC3.29□□□□□ -1.88
SYCNQ0VAF6 MIR1271-201ENST00000408537 86 ntBASIC3.29□□□□□ -1.88
SYCNQ0VAF6 RN7SKP206-201ENST00000410823 293 ntBASIC3.29□□□□□ -1.88
SYCNQ0VAF6 RNU4-74P-201ENST00000411280 161 ntBASIC3.29□□□□□ -1.88
SYCNQ0VAF6 RNA5SP498-201ENST00000411342 120 ntBASIC3.29□□□□□ -1.88
SYCNQ0VAF6 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC3.29□□□□□ -1.88
SYCNQ0VAF6 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
SYCNQ0VAF6 AC099336.2-201ENST00000422457 254 ntBASIC3.29□□□□□ -1.88
SYCNQ0VAF6 CHEK2P5-201ENST00000423877 246 ntBASIC3.29□□□□□ -1.88
SYCNQ0VAF6 FAR1P1-201ENST00000427163 934 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms