Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 LRRC37BP1-201ENST00000398851 714 ntBASIC4.92□□□□□ -1.62
CDK3Q00526 AL139128.1-201ENST00000413921 941 ntBASIC4.92□□□□□ -1.62
CDK3Q00526 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.92□□□□□ -1.62
CDK3Q00526 RBMY2KP-201ENST00000418221 992 ntBASIC4.92□□□□□ -1.62
CDK3Q00526 MGAT2P2-201ENST00000427194 797 ntBASIC4.92□□□□□ -1.62
CDK3Q00526 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
CDK3Q00526 AL160175.1-201ENST00000428124 247 ntBASIC4.92□□□□□ -1.62
CDK3Q00526 AL136231.1-201ENST00000429407 730 ntBASIC4.92□□□□□ -1.62
CDK3Q00526 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC4.92□□□□□ -1.62
CDK3Q00526 AL512661.1-201ENST00000434586 1253 ntBASIC4.92□□□□□ -1.62
CDK3Q00526 AC093414.1-201ENST00000434712 514 ntBASIC4.92□□□□□ -1.62
CDK3Q00526 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.92□□□□□ -1.62
CDK3Q00526 SDR42E1P3-201ENST00000438345 502 ntBASIC4.92□□□□□ -1.62
CDK3Q00526 AL450023.3-201ENST00000440592 271 ntBASIC4.92□□□□□ -1.62
CDK3Q00526 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC4.92□□□□□ -1.62
CDK3Q00526 AL691482.1-201ENST00000453255 87 ntBASIC4.92□□□□□ -1.62
CDK3Q00526 AC092902.1-201ENST00000486999 259 ntBASIC4.92□□□□□ -1.62
CDK3Q00526 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.92□□□□□ -1.62
CDK3Q00526 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
CDK3Q00526 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC4.92□□□□□ -1.62
CDK3Q00526 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CDK3Q00526 AC040958.1-201ENST00000561102 201 ntBASIC4.92□□□□□ -1.62
CDK3Q00526 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.92□□□□□ -1.62
CDK3Q00526 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.92□□□□□ -1.62
CDK3Q00526 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.92□□□□□ -1.62
CDK3Q00526 TVP23CP2-201ENST00000571473 623 ntBASIC4.92□□□□□ -1.62
CDK3Q00526 AC092953.2-201ENST00000608000 699 ntBASIC4.92□□□□□ -1.62
CDK3Q00526 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.92□□□□□ -1.62
CDK3Q00526 AP001521.2-201ENST00000608772 546 ntBASIC4.92□□□□□ -1.62
CDK3Q00526 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC4.92□□□□□ -1.62
CDK3Q00526 AC091953.3-201ENST00000623220 236 ntBASIC4.92□□□□□ -1.62
CDK3Q00526 AC138965.3-201ENST00000623875 498 ntBASIC4.92□□□□□ -1.62
CDK3Q00526 AC119674.1-212ENST00000641155 993 ntBASIC4.92□□□□□ -1.62
CDK3Q00526 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC4.92□□□□□ -1.62
CDK3Q00526 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CDK3Q00526 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.92□□□□□ -1.62
CDK3Q00526 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CDK3Q00526 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
CDK3Q00526 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CDK3Q00526 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.92□□□□□ -1.62
CDK3Q00526 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.92□□□□□ -1.62
CDK3Q00526 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC4.91□□□□□ -1.62
CDK3Q00526 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.91□□□□□ -1.62
CDK3Q00526 AC099654.2-201ENST00000433031 1980 ntBASIC4.91□□□□□ -1.62
CDK3Q00526 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CDK3Q00526 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CDK3Q00526 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CDK3Q00526 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CDK3Q00526 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.91□□□□□ -1.62
CDK3Q00526 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CDK3Q00526 SNORA63.3-201ENST00000362682 132 ntBASIC4.91□□□□□ -1.62
CDK3Q00526 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
CDK3Q00526 RNU2-17P-201ENST00000410290 190 ntBASIC4.91□□□□□ -1.62
CDK3Q00526 COX5BP7-201ENST00000414780 274 ntBASIC4.91□□□□□ -1.62
CDK3Q00526 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.91□□□□□ -1.62
CDK3Q00526 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.91□□□□□ -1.62
CDK3Q00526 MTCO2P1-201ENST00000424648 477 ntBASIC4.91□□□□□ -1.62
CDK3Q00526 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.91□□□□□ -1.62
CDK3Q00526 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC4.91□□□□□ -1.62
CDK3Q00526 AC006466.1-201ENST00000438721 289 ntBASIC4.91□□□□□ -1.62
CDK3Q00526 RPL7AP61-201ENST00000443410 636 ntBASIC4.91□□□□□ -1.62
CDK3Q00526 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.91□□□□□ -1.62
CDK3Q00526 AC092324.1-201ENST00000468671 324 ntBASIC4.91□□□□□ -1.62
CDK3Q00526 AL049874.2-201ENST00000492636 288 ntBASIC4.91□□□□□ -1.62
CDK3Q00526 NIFKP7-201ENST00000503365 834 ntBASIC4.91□□□□□ -1.62
CDK3Q00526 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CDK3Q00526 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.91□□□□□ -1.62
CDK3Q00526 GAPDHP56-201ENST00000506031 988 ntBASIC4.91□□□□□ -1.62
CDK3Q00526 AC100784.1-201ENST00000522790 310 ntBASIC4.91□□□□□ -1.62
CDK3Q00526 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.91□□□□□ -1.62
CDK3Q00526 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.91□□□□□ -1.62
CDK3Q00526 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC4.91□□□□□ -1.62
CDK3Q00526 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.91□□□□□ -1.62
CDK3Q00526 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.91□□□□□ -1.62
CDK3Q00526 AL049870.4-201ENST00000555741 486 ntBASIC4.91□□□□□ -1.62
CDK3Q00526 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC4.91□□□□□ -1.62
CDK3Q00526 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.91□□□□□ -1.62
CDK3Q00526 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
CDK3Q00526 MIR4480-201ENST00000582492 71 ntBASIC4.91□□□□□ -1.62
CDK3Q00526 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.91□□□□□ -1.62
CDK3Q00526 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.91□□□□□ -1.62
CDK3Q00526 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.91□□□□□ -1.62
CDK3Q00526 AF230666.2-201ENST00000602328 725 ntBASIC4.91□□□□□ -1.62
CDK3Q00526 AL031320.1-201ENST00000604177 357 ntBASIC4.91□□□□□ -1.62
CDK3Q00526 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.91□□□□□ -1.62
CDK3Q00526 AC145207.9-201ENST00000623802 325 ntBASIC4.91□□□□□ -1.62
CDK3Q00526 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
CDK3Q00526 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.91□□□□□ -1.62
CDK3Q00526 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CDK3Q00526 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CDK3Q00526 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CDK3Q00526 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CDK3Q00526 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CDK3Q00526 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CDK3Q00526 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CDK3Q00526 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
CDK3Q00526 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CDK3Q00526 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CDK3Q00526 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC4.9□□□□□ -1.62
CDK3Q00526 AC068870.3-201ENST00000625077 2536 ntBASIC4.9□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms