Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC5.61□□□□□ -1.51
CNTNAP1P78357 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC5.61□□□□□ -1.51
CNTNAP1P78357 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
CNTNAP1P78357 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.61□□□□□ -1.51
CNTNAP1P78357 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CNTNAP1P78357 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
CNTNAP1P78357 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CNTNAP1P78357 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CNTNAP1P78357 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CNTNAP1P78357 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
CNTNAP1P78357 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CNTNAP1P78357 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CNTNAP1P78357 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CNTNAP1P78357 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CNTNAP1P78357 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.6□□□□□ -1.51
CNTNAP1P78357 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.6□□□□□ -1.51
CNTNAP1P78357 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CNTNAP1P78357 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CNTNAP1P78357 STX3-208ENST00000641815 3236 ntBASIC5.6□□□□□ -1.51
CNTNAP1P78357 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CNTNAP1P78357 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CNTNAP1P78357 PVALB-202ENST00000404171 422 ntTSL 2 BASIC5.6□□□□□ -1.51
CNTNAP1P78357 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC5.6□□□□□ -1.51
CNTNAP1P78357 PDSS1P1-201ENST00000422953 1114 ntBASIC5.6□□□□□ -1.51
CNTNAP1P78357 YY1P1-201ENST00000427625 668 ntBASIC5.6□□□□□ -1.51
CNTNAP1P78357 AL136231.1-201ENST00000429407 730 ntBASIC5.6□□□□□ -1.51
CNTNAP1P78357 RPL37P1-201ENST00000432310 284 ntBASIC5.6□□□□□ -1.51
CNTNAP1P78357 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC5.6□□□□□ -1.51
CNTNAP1P78357 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC5.6□□□□□ -1.51
CNTNAP1P78357 RPL23AP93-201ENST00000440847 484 ntBASIC5.6□□□□□ -1.51
CNTNAP1P78357 RPL6P5-201ENST00000445678 828 ntBASIC5.6□□□□□ -1.51
CNTNAP1P78357 SCARNA10-201ENST00000459255 330 ntBASIC5.6□□□□□ -1.51
CNTNAP1P78357 SNORA59A-201ENST00000459326 152 ntBASIC5.6□□□□□ -1.51
CNTNAP1P78357 DEFB109A-201ENST00000482450 265 ntBASIC5.6□□□□□ -1.51
CNTNAP1P78357 AC026782.2-201ENST00000510845 636 ntBASIC5.6□□□□□ -1.51
CNTNAP1P78357 Y_RNA.719-201ENST00000517156 106 ntBASIC5.6□□□□□ -1.51
CNTNAP1P78357 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC5.6□□□□□ -1.51
CNTNAP1P78357 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC5.6□□□□□ -1.51
CNTNAP1P78357 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC5.6□□□□□ -1.51
CNTNAP1P78357 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC5.6□□□□□ -1.51
CNTNAP1P78357 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC5.6□□□□□ -1.51
CNTNAP1P78357 AGGF1P6-201ENST00000569213 976 ntBASIC5.6□□□□□ -1.51
CNTNAP1P78357 AL133338.2-201ENST00000604292 736 ntBASIC5.6□□□□□ -1.51
CNTNAP1P78357 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.6□□□□□ -1.51
CNTNAP1P78357 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.6□□□□□ -1.51
CNTNAP1P78357 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CNTNAP1P78357 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CNTNAP1P78357 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CNTNAP1P78357 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CNTNAP1P78357 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CNTNAP1P78357 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.6□□□□□ -1.51
CNTNAP1P78357 AL450345.1-202ENST00000605741 3881 ntBASIC5.6□□□□□ -1.51
CNTNAP1P78357 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.6□□□□□ -1.51
CNTNAP1P78357 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.59□□□□□ -1.51
CNTNAP1P78357 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CNTNAP1P78357 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CNTNAP1P78357 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.59□□□□□ -1.51
CNTNAP1P78357 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CNTNAP1P78357 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CNTNAP1P78357 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CNTNAP1P78357 OR14L1P-202ENST00000641545 3009 ntBASIC5.59□□□□□ -1.51
CNTNAP1P78357 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
CNTNAP1P78357 MIR372-201ENST00000362225 67 ntBASIC5.59□□□□□ -1.51
CNTNAP1P78357 RN7SKP267-201ENST00000410381 285 ntBASIC5.59□□□□□ -1.51
CNTNAP1P78357 COX5BP7-201ENST00000414780 274 ntBASIC5.59□□□□□ -1.51
CNTNAP1P78357 NPM1P25-201ENST00000429734 854 ntBASIC5.59□□□□□ -1.51
CNTNAP1P78357 ZFRP1-201ENST00000457579 2970 ntBASIC5.59□□□□□ -1.51
CNTNAP1P78357 AC091564.1-201ENST00000464563 479 ntBASIC5.59□□□□□ -1.51
CNTNAP1P78357 RPL21P126-201ENST00000470049 478 ntBASIC5.59□□□□□ -1.51
CNTNAP1P78357 RPL23AP2-201ENST00000471227 466 ntBASIC5.59□□□□□ -1.51
CNTNAP1P78357 AC091959.2-201ENST00000477363 321 ntBASIC5.59□□□□□ -1.51
CNTNAP1P78357 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC5.59□□□□□ -1.51
CNTNAP1P78357 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CNTNAP1P78357 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC5.59□□□□□ -1.51
CNTNAP1P78357 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.59□□□□□ -1.51
CNTNAP1P78357 MIR3653-201ENST00000625572 110 ntBASIC5.59□□□□□ -1.51
CNTNAP1P78357 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CNTNAP1P78357 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CNTNAP1P78357 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.59□□□□□ -1.51
CNTNAP1P78357 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CNTNAP1P78357 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC5.59□□□□□ -1.52
CNTNAP1P78357 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.59□□□□□ -1.52
CNTNAP1P78357 AL079305.1-201ENST00000623159 3008 ntBASIC5.59□□□□□ -1.52
CNTNAP1P78357 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CNTNAP1P78357 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CNTNAP1P78357 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CNTNAP1P78357 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CNTNAP1P78357 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.58□□□□□ -1.52
CNTNAP1P78357 RNA5SP366-201ENST00000365454 123 ntBASIC5.58□□□□□ -1.52
CNTNAP1P78357 RN7SKP159-201ENST00000410657 292 ntBASIC5.58□□□□□ -1.52
CNTNAP1P78357 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC5.58□□□□□ -1.52
CNTNAP1P78357 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC5.58□□□□□ -1.52
CNTNAP1P78357 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC5.58□□□□□ -1.52
CNTNAP1P78357 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.58□□□□□ -1.52
CNTNAP1P78357 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC5.58□□□□□ -1.52
CNTNAP1P78357 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC5.58□□□□□ -1.52
CNTNAP1P78357 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC5.58□□□□□ -1.52
CNTNAP1P78357 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC5.58□□□□□ -1.52
CNTNAP1P78357 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CNTNAP1P78357 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms