Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.12□□□□□ -1.75
UBA52P62987 ATG4AP1-201ENST00000416893 538 ntBASIC4.12□□□□□ -1.75
UBA52P62987 AC019050.1-201ENST00000418508 492 ntBASIC4.12□□□□□ -1.75
UBA52P62987 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
UBA52P62987 DYNLL1P7-201ENST00000429273 258 ntBASIC4.12□□□□□ -1.75
UBA52P62987 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.12□□□□□ -1.75
UBA52P62987 RPL34P20-201ENST00000442771 351 ntBASIC4.12□□□□□ -1.75
UBA52P62987 AC112498.1-201ENST00000444401 332 ntBASIC4.12□□□□□ -1.75
UBA52P62987 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.12□□□□□ -1.75
UBA52P62987 FGF7P3-201ENST00000454645 303 ntBASIC4.12□□□□□ -1.75
UBA52P62987 RPS26P28-201ENST00000470806 348 ntBASIC4.12□□□□□ -1.75
UBA52P62987 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
UBA52P62987 OR5AN2P-201ENST00000534535 896 ntBASIC4.12□□□□□ -1.75
UBA52P62987 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.12□□□□□ -1.75
UBA52P62987 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.12□□□□□ -1.75
UBA52P62987 MEMO1P5-201ENST00000604810 406 ntBASIC4.12□□□□□ -1.75
UBA52P62987 AL023583.1-201ENST00000607518 1143 ntBASIC4.12□□□□□ -1.75
UBA52P62987 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC4.12□□□□□ -1.75
UBA52P62987 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.12□□□□□ -1.75
UBA52P62987 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
UBA52P62987 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
UBA52P62987 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
UBA52P62987 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
UBA52P62987 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
UBA52P62987 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
UBA52P62987 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
UBA52P62987 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.12□□□□□ -1.75
UBA52P62987 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
UBA52P62987 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
UBA52P62987 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.11□□□□□ -1.75
UBA52P62987 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
UBA52P62987 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
UBA52P62987 AP001002.1-201ENST00000625148 1513 ntBASIC4.11□□□□□ -1.75
UBA52P62987 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.11□□□□□ -1.75
UBA52P62987 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
UBA52P62987 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
UBA52P62987 OR10J6P-201ENST00000289731 930 ntBASIC4.11□□□□□ -1.75
UBA52P62987 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
UBA52P62987 RNU1-32P-201ENST00000363937 159 ntBASIC4.11□□□□□ -1.75
UBA52P62987 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.11□□□□□ -1.75
UBA52P62987 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
UBA52P62987 RPS16P5-201ENST00000406501 404 ntBASIC4.11□□□□□ -1.75
UBA52P62987 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.11□□□□□ -1.75
UBA52P62987 RNA5SP104-201ENST00000410989 118 ntBASIC4.11□□□□□ -1.75
UBA52P62987 C4BPAP2-201ENST00000428434 478 ntBASIC4.11□□□□□ -1.75
UBA52P62987 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.11□□□□□ -1.75
UBA52P62987 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.11□□□□□ -1.75
UBA52P62987 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.11□□□□□ -1.75
UBA52P62987 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.11□□□□□ -1.75
UBA52P62987 AC063943.1-201ENST00000465434 453 ntBASIC4.11□□□□□ -1.75
UBA52P62987 RPL23AP65-201ENST00000475608 468 ntBASIC4.11□□□□□ -1.75
UBA52P62987 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC4.11□□□□□ -1.75
UBA52P62987 AC025445.1-201ENST00000502728 300 ntBASIC4.11□□□□□ -1.75
UBA52P62987 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.11□□□□□ -1.75
UBA52P62987 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC4.11□□□□□ -1.75
UBA52P62987 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.11□□□□□ -1.75
UBA52P62987 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC4.11□□□□□ -1.75
UBA52P62987 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.11□□□□□ -1.75
UBA52P62987 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
UBA52P62987 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.11□□□□□ -1.75
UBA52P62987 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
UBA52P62987 AL512310.9-201ENST00000553311 948 ntBASIC4.11□□□□□ -1.75
UBA52P62987 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.11□□□□□ -1.75
UBA52P62987 UBE2FP2-201ENST00000566646 462 ntBASIC4.11□□□□□ -1.75
UBA52P62987 AL121834.1-201ENST00000572284 509 ntBASIC4.11□□□□□ -1.75
UBA52P62987 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
UBA52P62987 AC008745.1-201ENST00000604064 271 ntBASIC4.11□□□□□ -1.75
UBA52P62987 COX6CP4-201ENST00000605798 228 ntBASIC4.11□□□□□ -1.75
UBA52P62987 AP005432.2-201ENST00000608162 586 ntBASIC4.11□□□□□ -1.75
UBA52P62987 OR8G7P-201ENST00000616658 848 ntBASIC4.11□□□□□ -1.75
UBA52P62987 MIR7154-201ENST00000620673 73 ntBASIC4.11□□□□□ -1.75
UBA52P62987 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.11□□□□□ -1.75
UBA52P62987 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.11□□□□□ -1.75
UBA52P62987 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.11□□□□□ -1.75
UBA52P62987 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
UBA52P62987 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.11□□□□□ -1.75
UBA52P62987 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
UBA52P62987 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
UBA52P62987 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
UBA52P62987 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
UBA52P62987 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.1□□□□□ -1.75
UBA52P62987 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
UBA52P62987 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
UBA52P62987 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
UBA52P62987 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
UBA52P62987 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
UBA52P62987 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.1□□□□□ -1.75
UBA52P62987 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
UBA52P62987 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
UBA52P62987 AC119751.6-201ENST00000416712 186 ntBASIC4.1□□□□□ -1.75
UBA52P62987 COX6CP17-201ENST00000421389 185 ntBASIC4.1□□□□□ -1.75
UBA52P62987 DNAJC19P7-201ENST00000428811 344 ntBASIC4.1□□□□□ -1.75
UBA52P62987 AC091390.1-201ENST00000433904 331 ntBASIC4.1□□□□□ -1.75
UBA52P62987 GSTA7P-201ENST00000438425 448 ntBASIC4.1□□□□□ -1.75
UBA52P62987 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.1□□□□□ -1.75
UBA52P62987 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC4.1□□□□□ -1.75
UBA52P62987 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.1□□□□□ -1.75
UBA52P62987 AC073264.2-201ENST00000448886 166 ntBASIC4.1□□□□□ -1.75
UBA52P62987 AC096741.1-201ENST00000472250 846 ntBASIC4.1□□□□□ -1.75
UBA52P62987 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms