Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CDH4P55283 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.86□□□□□ -1.63
CDH4P55283 RN7SL652P-201ENST00000577769 300 ntBASIC4.86□□□□□ -1.63
CDH4P55283 FAM106CP-201ENST00000582212 507 ntBASIC4.86□□□□□ -1.63
CDH4P55283 MIR3936-201ENST00000584304 110 ntBASIC4.86□□□□□ -1.63
CDH4P55283 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.86□□□□□ -1.63
CDH4P55283 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.86□□□□□ -1.63
CDH4P55283 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.86□□□□□ -1.63
CDH4P55283 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.86□□□□□ -1.63
CDH4P55283 AC124856.1-201ENST00000600819 896 ntBASIC4.86□□□□□ -1.63
CDH4P55283 AC087283.1-201ENST00000604029 1074 ntBASIC4.86□□□□□ -1.63
CDH4P55283 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.86□□□□□ -1.63
CDH4P55283 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
CDH4P55283 AC010928.1-201ENST00000592477 1447 ntBASIC4.86□□□□□ -1.63
CDH4P55283 CASC19-206ENST00000641028 1430 ntBASIC4.86□□□□□ -1.63
CDH4P55283 AC012618.3-205ENST00000637896 1496 ntBASIC4.86□□□□□ -1.63
CDH4P55283 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CDH4P55283 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.86□□□□□ -1.63
CDH4P55283 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.86□□□□□ -1.63
CDH4P55283 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.85□□□□□ -1.63
CDH4P55283 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CDH4P55283 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CDH4P55283 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
CDH4P55283 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
CDH4P55283 AL590240.1-201ENST00000334118 313 ntBASIC4.85□□□□□ -1.63
CDH4P55283 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
CDH4P55283 RNA5SP105-201ENST00000391123 113 ntBASIC4.85□□□□□ -1.63
CDH4P55283 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC4.85□□□□□ -1.63
CDH4P55283 CKS1BP6-201ENST00000424932 240 ntBASIC4.85□□□□□ -1.63
CDH4P55283 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.85□□□□□ -1.63
CDH4P55283 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC4.85□□□□□ -1.63
CDH4P55283 AC097523.2-201ENST00000435551 652 ntBASIC4.85□□□□□ -1.63
CDH4P55283 MRPL48P1-201ENST00000445390 636 ntBASIC4.85□□□□□ -1.63
CDH4P55283 H2AFZP5-201ENST00000446960 382 ntBASIC4.85□□□□□ -1.63
CDH4P55283 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.85□□□□□ -1.63
CDH4P55283 AC010326.1-201ENST00000462726 602 ntBASIC4.85□□□□□ -1.63
CDH4P55283 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC4.85□□□□□ -1.63
CDH4P55283 RPS29P22-201ENST00000472363 168 ntBASIC4.85□□□□□ -1.63
CDH4P55283 AC025164.1-201ENST00000496249 478 ntBASIC4.85□□□□□ -1.63
CDH4P55283 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.85□□□□□ -1.63
CDH4P55283 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.85□□□□□ -1.63
CDH4P55283 AC087477.6-201ENST00000559595 843 ntBASIC4.85□□□□□ -1.63
CDH4P55283 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.85□□□□□ -1.63
CDH4P55283 MIR4700-201ENST00000578311 74 ntBASIC4.85□□□□□ -1.63
CDH4P55283 RN7SL690P-201ENST00000582087 240 ntBASIC4.85□□□□□ -1.63
CDH4P55283 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.85□□□□□ -1.63
CDH4P55283 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.85□□□□□ -1.63
CDH4P55283 OR7A19P-201ENST00000608051 733 ntBASIC4.85□□□□□ -1.63
CDH4P55283 AC020763.5-201ENST00000623298 430 ntBASIC4.85□□□□□ -1.63
CDH4P55283 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.85□□□□□ -1.63
CDH4P55283 HSPA8P17-201ENST00000427029 1382 ntBASIC4.85□□□□□ -1.63
CDH4P55283 AL359922.3-201ENST00000624779 1670 ntBASIC4.85□□□□□ -1.63
CDH4P55283 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
CDH4P55283 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CDH4P55283 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CDH4P55283 AC097461.1-201ENST00000568928 2821 ntBASIC4.85□□□□□ -1.63
CDH4P55283 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.85□□□□□ -1.63
CDH4P55283 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
CDH4P55283 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CDH4P55283 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
CDH4P55283 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CDH4P55283 DHX9P1-201ENST00000436565 3076 ntBASIC4.84□□□□□ -1.63
CDH4P55283 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
CDH4P55283 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CDH4P55283 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CDH4P55283 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
CDH4P55283 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.84□□□□□ -1.63
CDH4P55283 RPL5P19-201ENST00000404228 893 ntBASIC4.84□□□□□ -1.63
CDH4P55283 ARL4AP5-201ENST00000404372 599 ntBASIC4.84□□□□□ -1.63
CDH4P55283 AP000580.1-201ENST00000404439 358 ntBASIC4.84□□□□□ -1.63
CDH4P55283 OR51B3P-201ENST00000412287 913 ntBASIC4.84□□□□□ -1.63
CDH4P55283 ATG4AP1-201ENST00000416893 538 ntBASIC4.84□□□□□ -1.63
CDH4P55283 AC140479.3-201ENST00000418944 1126 ntBASIC4.84□□□□□ -1.63
CDH4P55283 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.84□□□□□ -1.63
CDH4P55283 AC012512.1-201ENST00000446594 718 ntBASIC4.84□□□□□ -1.63
CDH4P55283 AC073264.2-201ENST00000448886 166 ntBASIC4.84□□□□□ -1.63
CDH4P55283 RHEBP2-201ENST00000450289 600 ntBASIC4.84□□□□□ -1.63
CDH4P55283 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.84□□□□□ -1.63
CDH4P55283 AC090142.1-201ENST00000465776 462 ntBASIC4.84□□□□□ -1.63
CDH4P55283 AC105918.1-201ENST00000474399 838 ntBASIC4.84□□□□□ -1.63
CDH4P55283 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.84□□□□□ -1.63
CDH4P55283 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.84□□□□□ -1.63
CDH4P55283 AC068790.7-201ENST00000602347 528 ntBASIC4.84□□□□□ -1.63
CDH4P55283 AC104785.1-201ENST00000603220 588 ntBASIC4.84□□□□□ -1.63
CDH4P55283 AC073137.1-201ENST00000605636 634 ntBASIC4.84□□□□□ -1.63
CDH4P55283 AL008729.2-201ENST00000606393 473 ntBASIC4.84□□□□□ -1.63
CDH4P55283 AL121890.2-201ENST00000617644 465 ntBASIC4.84□□□□□ -1.63
CDH4P55283 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CDH4P55283 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CDH4P55283 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.84□□□□□ -1.63
CDH4P55283 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CDH4P55283 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
CDH4P55283 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
CDH4P55283 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.84□□□□□ -1.64
CDH4P55283 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
CDH4P55283 NEAT1-202ENST00000501122 22743 ntBASIC4.84□□□□□ -1.64
CDH4P55283 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
CDH4P55283 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CDH4P55283 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CDH4P55283 AL136164.3-201ENST00000624429 3978 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms