Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC5.04□□□□□ -1.6
CASP4P49662 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.04□□□□□ -1.6
CASP4P49662 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC5.04□□□□□ -1.6
CASP4P49662 MIR4270-201ENST00000581799 70 ntBASIC5.04□□□□□ -1.6
CASP4P49662 AC010615.3-201ENST00000597319 394 ntBASIC5.04□□□□□ -1.6
CASP4P49662 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.04□□□□□ -1.6
CASP4P49662 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CASP4P49662 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.04□□□□□ -1.6
CASP4P49662 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CASP4P49662 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.04□□□□□ -1.6
CASP4P49662 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
CASP4P49662 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CASP4P49662 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CASP4P49662 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.04□□□□□ -1.6
CASP4P49662 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CASP4P49662 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CASP4P49662 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CASP4P49662 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CASP4P49662 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CASP4P49662 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CASP4P49662 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
CASP4P49662 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
CASP4P49662 AC021146.4-201ENST00000309229 279 ntBASIC5.03□□□□□ -1.6
CASP4P49662 Y_RNA.62-201ENST00000362840 99 ntBASIC5.03□□□□□ -1.6
CASP4P49662 RNU4-44P-201ENST00000363050 141 ntBASIC5.03□□□□□ -1.6
CASP4P49662 RNA5SP151-201ENST00000365632 117 ntBASIC5.03□□□□□ -1.6
CASP4P49662 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CASP4P49662 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CASP4P49662 VDAC2P1-201ENST00000399358 958 ntBASIC5.03□□□□□ -1.6
CASP4P49662 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
CASP4P49662 AL133270.1-201ENST00000402635 279 ntBASIC5.03□□□□□ -1.6
CASP4P49662 AC233289.1-201ENST00000403700 508 ntBASIC5.03□□□□□ -1.6
CASP4P49662 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC5.03□□□□□ -1.6
CASP4P49662 USP9YP9-201ENST00000429406 715 ntBASIC5.03□□□□□ -1.6
CASP4P49662 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC5.03□□□□□ -1.6
CASP4P49662 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.03□□□□□ -1.6
CASP4P49662 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.03□□□□□ -1.6
CASP4P49662 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.03□□□□□ -1.6
CASP4P49662 ISCUP1-201ENST00000454451 448 ntBASIC5.03□□□□□ -1.6
CASP4P49662 AC104763.1-201ENST00000475274 360 ntBASIC5.03□□□□□ -1.6
CASP4P49662 AC098583.1-201ENST00000480875 255 ntBASIC5.03□□□□□ -1.6
CASP4P49662 RPL7AP10-201ENST00000481016 791 ntBASIC5.03□□□□□ -1.6
CASP4P49662 AC113398.2-201ENST00000507630 558 ntBASIC5.03□□□□□ -1.6
CASP4P49662 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.03□□□□□ -1.6
CASP4P49662 RN7SKP46-201ENST00000515942 234 ntBASIC5.03□□□□□ -1.6
CASP4P49662 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.03□□□□□ -1.6
CASP4P49662 AC008147.3-201ENST00000548666 354 ntBASIC5.03□□□□□ -1.6
CASP4P49662 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC5.03□□□□□ -1.6
CASP4P49662 MIR4443-201ENST00000585052 53 ntBASIC5.03□□□□□ -1.6
CASP4P49662 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC5.03□□□□□ -1.6
CASP4P49662 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC5.03□□□□□ -1.6
CASP4P49662 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.03□□□□□ -1.6
CASP4P49662 AC004232.3-201ENST00000622977 525 ntBASIC5.03□□□□□ -1.6
CASP4P49662 AC005086.4-201ENST00000623065 213 ntBASIC5.03□□□□□ -1.6
CASP4P49662 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC5.03□□□□□ -1.6
CASP4P49662 U3.53-201ENST00000628922 216 ntBASIC5.03□□□□□ -1.6
CASP4P49662 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CASP4P49662 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CASP4P49662 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CASP4P49662 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CASP4P49662 MTCO1P22-201ENST00000604619 1360 ntBASIC5.03□□□□□ -1.6
CASP4P49662 KARSP3-201ENST00000571212 1504 ntBASIC5.02□□□□□ -1.61
CASP4P49662 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CASP4P49662 AL606537.1-201ENST00000607258 2011 ntBASIC5.02□□□□□ -1.61
CASP4P49662 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
CASP4P49662 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CASP4P49662 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CASP4P49662 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CASP4P49662 RNVU1-6-201ENST00000364688 164 ntBASIC5.02□□□□□ -1.61
CASP4P49662 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CASP4P49662 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC5.02□□□□□ -1.61
CASP4P49662 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CASP4P49662 AL139128.1-201ENST00000413921 941 ntBASIC5.02□□□□□ -1.61
CASP4P49662 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC5.02□□□□□ -1.61
CASP4P49662 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.02□□□□□ -1.61
CASP4P49662 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CASP4P49662 AL935212.3-201ENST00000450729 284 ntBASIC5.02□□□□□ -1.61
CASP4P49662 SBDSP1-204ENST00000453858 737 ntBASIC5.02□□□□□ -1.61
CASP4P49662 AC006967.1-201ENST00000467608 589 ntBASIC5.02□□□□□ -1.61
CASP4P49662 RN7SL354P-201ENST00000469282 294 ntBASIC5.02□□□□□ -1.61
CASP4P49662 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.02□□□□□ -1.61
CASP4P49662 MTND4LP2-201ENST00000502312 285 ntBASIC5.02□□□□□ -1.61
CASP4P49662 AK4P6-201ENST00000505168 528 ntBASIC5.02□□□□□ -1.61
CASP4P49662 AC098799.3-201ENST00000506095 438 ntBASIC5.02□□□□□ -1.61
CASP4P49662 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.02□□□□□ -1.61
CASP4P49662 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.02□□□□□ -1.61
CASP4P49662 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.02□□□□□ -1.61
CASP4P49662 RNA5SP446-201ENST00000515955 82 ntBASIC5.02□□□□□ -1.61
CASP4P49662 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.02□□□□□ -1.61
CASP4P49662 NPM1P52-201ENST00000518264 846 ntBASIC5.02□□□□□ -1.61
CASP4P49662 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.02□□□□□ -1.61
CASP4P49662 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC5.02□□□□□ -1.61
CASP4P49662 AP005901.4-201ENST00000577336 569 ntBASIC5.02□□□□□ -1.61
CASP4P49662 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC5.02□□□□□ -1.61
CASP4P49662 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.02□□□□□ -1.61
CASP4P49662 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC5.02□□□□□ -1.61
CASP4P49662 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CASP4P49662 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CASP4P49662 AC093775.1-201ENST00000624154 1868 ntBASIC5.02□□□□□ -1.61
CASP4P49662 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms