Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AZGP1P2-201ENST00000454506 345 ntBASIC4.86□□□□□ -1.63
SOX2P48431 AL122020.1-201ENST00000472287 459 ntBASIC4.86□□□□□ -1.63
SOX2P48431 RN7SL193P-201ENST00000491708 276 ntBASIC4.86□□□□□ -1.63
SOX2P48431 AC009120.1-201ENST00000493458 473 ntBASIC4.86□□□□□ -1.63
SOX2P48431 AC084024.2-201ENST00000503480 791 ntBASIC4.86□□□□□ -1.63
SOX2P48431 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.86□□□□□ -1.63
SOX2P48431 NDUFB4P12-201ENST00000513465 390 ntBASIC4.86□□□□□ -1.63
SOX2P48431 MRPS5P3-201ENST00000515577 166 ntBASIC4.86□□□□□ -1.63
SOX2P48431 RNU6-1129P-201ENST00000515964 104 ntBASIC4.86□□□□□ -1.63
SOX2P48431 SCARNA18.1-201ENST00000516330 83 ntBASIC4.86□□□□□ -1.63
SOX2P48431 RNA5SP340-201ENST00000517132 107 ntBASIC4.86□□□□□ -1.63
SOX2P48431 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.86□□□□□ -1.63
SOX2P48431 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC4.86□□□□□ -1.63
SOX2P48431 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC4.86□□□□□ -1.63
SOX2P48431 C1GALT1P3-201ENST00000522049 819 ntBASIC4.86□□□□□ -1.63
SOX2P48431 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.86□□□□□ -1.63
SOX2P48431 AC087373.1-201ENST00000524920 491 ntBASIC4.86□□□□□ -1.63
SOX2P48431 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.86□□□□□ -1.63
SOX2P48431 AP002812.4-201ENST00000532139 286 ntBASIC4.86□□□□□ -1.63
SOX2P48431 RAB30-209ENST00000532548 644 ntTSL 3 BASIC4.86□□□□□ -1.63
SOX2P48431 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC4.86□□□□□ -1.63
SOX2P48431 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.86□□□□□ -1.63
SOX2P48431 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC4.86□□□□□ -1.63
SOX2P48431 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC4.86□□□□□ -1.63
SOX2P48431 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC4.86□□□□□ -1.63
SOX2P48431 NELL2-211ENST00000548826 559 ntTSL 2 BASIC4.86□□□□□ -1.63
SOX2P48431 HSPE1P2-201ENST00000554777 306 ntBASIC4.86□□□□□ -1.63
SOX2P48431 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC4.86□□□□□ -1.63
SOX2P48431 AC044913.1-201ENST00000557200 430 ntBASIC4.86□□□□□ -1.63
SOX2P48431 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC4.86□□□□□ -1.63
SOX2P48431 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC4.86□□□□□ -1.63
SOX2P48431 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC4.86□□□□□ -1.63
SOX2P48431 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC4.86□□□□□ -1.63
SOX2P48431 RN7SL290P-201ENST00000578661 300 ntBASIC4.86□□□□□ -1.63
SOX2P48431 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.86□□□□□ -1.63
SOX2P48431 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.86□□□□□ -1.63
SOX2P48431 EIF1P6-201ENST00000600054 334 ntBASIC4.86□□□□□ -1.63
SOX2P48431 AC124916.2-201ENST00000604416 224 ntBASIC4.86□□□□□ -1.63
SOX2P48431 BNIP3P4-201ENST00000604946 565 ntBASIC4.86□□□□□ -1.63
SOX2P48431 AL021707.7-201ENST00000607991 416 ntBASIC4.86□□□□□ -1.63
SOX2P48431 AL592148.2-201ENST00000612210 372 ntBASIC4.86□□□□□ -1.63
SOX2P48431 MIR6793-201ENST00000612376 63 ntBASIC4.86□□□□□ -1.63
SOX2P48431 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC4.86□□□□□ -1.63
SOX2P48431 AL603755.1-201ENST00000619504 163 ntBASIC4.86□□□□□ -1.63
SOX2P48431 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC4.86□□□□□ -1.63
SOX2P48431 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SOX2P48431 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC4.86□□□□□ -1.63
SOX2P48431 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
SOX2P48431 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC4.86□□□□□ -1.63
SOX2P48431 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SOX2P48431 CYP4Z2P-201ENST00000423332 1512 ntBASIC4.86□□□□□ -1.63
SOX2P48431 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.86□□□□□ -1.63
SOX2P48431 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SOX2P48431 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
SOX2P48431 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
SOX2P48431 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SOX2P48431 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.86□□□□□ -1.63
SOX2P48431 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC4.85□□□□□ -1.63
SOX2P48431 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SOX2P48431 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SOX2P48431 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
SOX2P48431 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SOX2P48431 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.85□□□□□ -1.63
SOX2P48431 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
SOX2P48431 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SOX2P48431 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
SOX2P48431 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC4.85□□□□□ -1.63
SOX2P48431 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SOX2P48431 RNA5SP500-201ENST00000364486 119 ntBASIC4.85□□□□□ -1.63
SOX2P48431 snoZ40.1-201ENST00000364540 72 ntBASIC4.85□□□□□ -1.63
SOX2P48431 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SOX2P48431 Y_RNA.465-201ENST00000384293 102 ntBASIC4.85□□□□□ -1.63
SOX2P48431 RNU5A-2P-201ENST00000384337 116 ntBASIC4.85□□□□□ -1.63
SOX2P48431 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
SOX2P48431 LYPLA1P3-201ENST00000402650 695 ntBASIC4.85□□□□□ -1.63
SOX2P48431 PPIAP9-201ENST00000403866 498 ntBASIC4.85□□□□□ -1.63
SOX2P48431 AL009179.1-201ENST00000406085 265 ntBASIC4.85□□□□□ -1.63
SOX2P48431 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC4.85□□□□□ -1.63
SOX2P48431 MTND4P22-201ENST00000413116 1169 ntBASIC4.85□□□□□ -1.63
SOX2P48431 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC4.85□□□□□ -1.63
SOX2P48431 BX284632.2-201ENST00000421091 399 ntBASIC4.85□□□□□ -1.63
SOX2P48431 Z82198.3-201ENST00000421145 199 ntBASIC4.85□□□□□ -1.63
SOX2P48431 CNOT7P1-201ENST00000429006 852 ntBASIC4.85□□□□□ -1.63
SOX2P48431 PNKDP1-201ENST00000435914 430 ntBASIC4.85□□□□□ -1.63
SOX2P48431 AC073143.1-201ENST00000436316 395 ntBASIC4.85□□□□□ -1.63
SOX2P48431 CYCSP11-201ENST00000436426 315 ntBASIC4.85□□□□□ -1.63
SOX2P48431 UBE2D3P1-201ENST00000436669 444 ntBASIC4.85□□□□□ -1.63
SOX2P48431 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC4.85□□□□□ -1.63
SOX2P48431 AC009263.1-201ENST00000441193 1239 ntBASIC4.85□□□□□ -1.63
SOX2P48431 AL512605.1-202ENST00000441919 381 ntBASIC4.85□□□□□ -1.63
SOX2P48431 AL359955.2-201ENST00000445380 353 ntBASIC4.85□□□□□ -1.63
SOX2P48431 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC4.85□□□□□ -1.63
SOX2P48431 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.85□□□□□ -1.63
SOX2P48431 AL596266.1-201ENST00000448132 400 ntBASIC4.85□□□□□ -1.63
SOX2P48431 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC4.85□□□□□ -1.63
SOX2P48431 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC4.85□□□□□ -1.63
SOX2P48431 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.85□□□□□ -1.63
SOX2P48431 AC023194.2-201ENST00000465398 406 ntBASIC4.85□□□□□ -1.63
SOX2P48431 RPL35AP19-201ENST00000469425 329 ntBASIC4.85□□□□□ -1.63
SOX2P48431 AC126121.1-201ENST00000482313 553 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms