Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC4.87□□□□□ -1.63
TRIM23P36406 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.87□□□□□ -1.63
TRIM23P36406 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.87□□□□□ -1.63
TRIM23P36406 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TRIM23P36406 AC005229.3-201ENST00000603438 323 ntBASIC4.87□□□□□ -1.63
TRIM23P36406 AC007497.1-201ENST00000610421 561 ntBASIC4.87□□□□□ -1.63
TRIM23P36406 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.87□□□□□ -1.63
TRIM23P36406 AL023881.1-201ENST00000621088 301 ntBASIC4.87□□□□□ -1.63
TRIM23P36406 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.87□□□□□ -1.63
TRIM23P36406 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.87□□□□□ -1.63
TRIM23P36406 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC4.87□□□□□ -1.63
TRIM23P36406 AL450345.1-202ENST00000605741 3881 ntBASIC4.87□□□□□ -1.63
TRIM23P36406 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TRIM23P36406 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
TRIM23P36406 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.87□□□□□ -1.63
TRIM23P36406 SAMMSON-226ENST00000642089 1582 ntBASIC4.87□□□□□ -1.63
TRIM23P36406 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TRIM23P36406 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.86□□□□□ -1.63
TRIM23P36406 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.86□□□□□ -1.63
TRIM23P36406 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM23P36406 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.86□□□□□ -1.63
TRIM23P36406 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.86□□□□□ -1.63
TRIM23P36406 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
TRIM23P36406 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.86□□□□□ -1.63
TRIM23P36406 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM23P36406 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM23P36406 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
TRIM23P36406 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
TRIM23P36406 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM23P36406 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
TRIM23P36406 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM23P36406 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM23P36406 AC013442.1-201ENST00000397347 228 ntBASIC4.86□□□□□ -1.63
TRIM23P36406 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM23P36406 RPL21P67-201ENST00000402896 478 ntBASIC4.86□□□□□ -1.63
TRIM23P36406 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.86□□□□□ -1.63
TRIM23P36406 RN7SKP16-201ENST00000410180 299 ntBASIC4.86□□□□□ -1.63
TRIM23P36406 RPL37P18-201ENST00000411602 243 ntBASIC4.86□□□□□ -1.63
TRIM23P36406 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.86□□□□□ -1.63
TRIM23P36406 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.86□□□□□ -1.63
TRIM23P36406 AC092570.3-201ENST00000420113 693 ntBASIC4.86□□□□□ -1.63
TRIM23P36406 AC093084.1-201ENST00000424233 687 ntBASIC4.86□□□□□ -1.63
TRIM23P36406 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC4.86□□□□□ -1.63
TRIM23P36406 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.86□□□□□ -1.63
TRIM23P36406 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC4.86□□□□□ -1.63
TRIM23P36406 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM23P36406 AC021660.1-201ENST00000465006 554 ntBASIC4.86□□□□□ -1.63
TRIM23P36406 RPS29P22-201ENST00000472363 168 ntBASIC4.86□□□□□ -1.63
TRIM23P36406 RN7SL809P-201ENST00000482040 297 ntBASIC4.86□□□□□ -1.63
TRIM23P36406 NIFKP7-201ENST00000503365 834 ntBASIC4.86□□□□□ -1.63
TRIM23P36406 RNA5SP228-201ENST00000516232 133 ntBASIC4.86□□□□□ -1.63
TRIM23P36406 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.86□□□□□ -1.63
TRIM23P36406 AC109635.6-201ENST00000525487 1113 ntBASIC4.86□□□□□ -1.63
TRIM23P36406 OR7E10P-201ENST00000526420 991 ntBASIC4.86□□□□□ -1.63
TRIM23P36406 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.86□□□□□ -1.63
TRIM23P36406 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC4.86□□□□□ -1.63
TRIM23P36406 AC008147.3-201ENST00000548666 354 ntBASIC4.86□□□□□ -1.63
TRIM23P36406 CD24P2-201ENST00000565486 219 ntBASIC4.86□□□□□ -1.63
TRIM23P36406 MIR3667-201ENST00000581025 74 ntBASIC4.86□□□□□ -1.63
TRIM23P36406 AC104687.2-201ENST00000604442 342 ntBASIC4.86□□□□□ -1.63
TRIM23P36406 AC010424.2-201ENST00000607594 443 ntBASIC4.86□□□□□ -1.63
TRIM23P36406 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.86□□□□□ -1.63
TRIM23P36406 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.86□□□□□ -1.63
TRIM23P36406 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
TRIM23P36406 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM23P36406 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.86□□□□□ -1.63
TRIM23P36406 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM23P36406 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
TRIM23P36406 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.85□□□□□ -1.63
TRIM23P36406 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TRIM23P36406 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.85□□□□□ -1.63
TRIM23P36406 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
TRIM23P36406 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
TRIM23P36406 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.85□□□□□ -1.63
TRIM23P36406 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
TRIM23P36406 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TRIM23P36406 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TRIM23P36406 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TRIM23P36406 OR10J6P-201ENST00000289731 930 ntBASIC4.85□□□□□ -1.63
TRIM23P36406 SNORA73.1-201ENST00000363107 205 ntBASIC4.85□□□□□ -1.63
TRIM23P36406 AC083799.1-201ENST00000366451 910 ntBASIC4.85□□□□□ -1.63
TRIM23P36406 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
TRIM23P36406 RPL10P10-201ENST00000403509 664 ntBASIC4.85□□□□□ -1.63
TRIM23P36406 AL359643.1-201ENST00000404109 423 ntBASIC4.85□□□□□ -1.63
TRIM23P36406 RN7SKP100-201ENST00000411258 284 ntBASIC4.85□□□□□ -1.63
TRIM23P36406 EIF4A1P3-201ENST00000411521 244 ntBASIC4.85□□□□□ -1.63
TRIM23P36406 AC114755.2-201ENST00000413520 361 ntBASIC4.85□□□□□ -1.63
TRIM23P36406 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.85□□□□□ -1.63
TRIM23P36406 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.85□□□□□ -1.63
TRIM23P36406 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.85□□□□□ -1.63
TRIM23P36406 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.85□□□□□ -1.63
TRIM23P36406 AC000111.2-201ENST00000448200 210 ntBASIC4.85□□□□□ -1.63
TRIM23P36406 BUD31P2-201ENST00000449374 300 ntBASIC4.85□□□□□ -1.63
TRIM23P36406 RN7SL517P-201ENST00000462240 305 ntBASIC4.85□□□□□ -1.63
TRIM23P36406 STRADBP1-201ENST00000478954 1281 ntBASIC4.85□□□□□ -1.63
TRIM23P36406 AC116562.1-201ENST00000485355 781 ntBASIC4.85□□□□□ -1.63
TRIM23P36406 AC073073.1-201ENST00000493920 463 ntBASIC4.85□□□□□ -1.63
TRIM23P36406 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.85□□□□□ -1.63
TRIM23P36406 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
TRIM23P36406 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms