Protein–RNA interactions for Protein: P31274

HOXC9, Homeobox protein Hox-C9, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9P31274 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.08□□□□□ -1.44
HOXC9P31274 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HOXC9P31274 OR5T3-201ENST00000303059 1023 ntBASIC6.08□□□□□ -1.44
HOXC9P31274 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
HOXC9P31274 RNA5SP28-201ENST00000363841 119 ntBASIC6.08□□□□□ -1.44
HOXC9P31274 AL050305.1-201ENST00000399993 1230 ntBASIC6.08□□□□□ -1.44
HOXC9P31274 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC6.08□□□□□ -1.44
HOXC9P31274 RPS27AP12-201ENST00000429552 465 ntBASIC6.08□□□□□ -1.44
HOXC9P31274 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC6.08□□□□□ -1.44
HOXC9P31274 BTBD7P2-201ENST00000441962 620 ntBASIC6.08□□□□□ -1.44
HOXC9P31274 NUTF2P3-201ENST00000448540 384 ntBASIC6.08□□□□□ -1.44
HOXC9P31274 AL935212.3-201ENST00000450729 284 ntBASIC6.08□□□□□ -1.44
HOXC9P31274 MTND3P4-201ENST00000453537 303 ntBASIC6.08□□□□□ -1.44
HOXC9P31274 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC6.08□□□□□ -1.44
HOXC9P31274 OR52A4P-202ENST00000481634 799 ntBASIC6.08□□□□□ -1.44
HOXC9P31274 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC6.08□□□□□ -1.44
HOXC9P31274 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC6.08□□□□□ -1.44
HOXC9P31274 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC6.08□□□□□ -1.44
HOXC9P31274 AC084824.1-201ENST00000550917 1005 ntBASIC6.08□□□□□ -1.44
HOXC9P31274 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC6.08□□□□□ -1.44
HOXC9P31274 AC007224.1-201ENST00000564410 144 ntBASIC6.08□□□□□ -1.44
HOXC9P31274 AC021483.2-201ENST00000567415 758 ntBASIC6.08□□□□□ -1.44
HOXC9P31274 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC6.08□□□□□ -1.44
HOXC9P31274 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC6.08□□□□□ -1.44
HOXC9P31274 AL109618.2-201ENST00000605527 211 ntBASIC6.08□□□□□ -1.44
HOXC9P31274 AC020634.1-201ENST00000608701 549 ntBASIC6.08□□□□□ -1.44
HOXC9P31274 AC009120.7-201ENST00000623452 780 ntBASIC6.08□□□□□ -1.44
HOXC9P31274 AC004656.1-201ENST00000568479 4951 ntBASIC6.08□□□□□ -1.44
HOXC9P31274 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HOXC9P31274 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HOXC9P31274 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HOXC9P31274 AL136164.3-201ENST00000624429 3978 ntBASIC6.08□□□□□ -1.44
HOXC9P31274 AC090017.1-201ENST00000548612 1779 ntBASIC6.08□□□□□ -1.44
HOXC9P31274 AL078595.2-201ENST00000605309 1780 ntBASIC6.08□□□□□ -1.44
HOXC9P31274 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC6.08□□□□□ -1.44
HOXC9P31274 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
HOXC9P31274 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC6.08□□□□□ -1.44
HOXC9P31274 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HOXC9P31274 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.07□□□□□ -1.44
HOXC9P31274 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HOXC9P31274 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
HOXC9P31274 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC6.07□□□□□ -1.44
HOXC9P31274 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HOXC9P31274 AL132656.3-201ENST00000606384 1595 ntBASIC6.07□□□□□ -1.44
HOXC9P31274 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
HOXC9P31274 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
HOXC9P31274 RNU6-891P-201ENST00000384280 111 ntBASIC6.07□□□□□ -1.44
HOXC9P31274 SNX10-203ENST00000409367 746 ntTSL 5 BASIC6.07□□□□□ -1.44
HOXC9P31274 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC6.07□□□□□ -1.44
HOXC9P31274 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HOXC9P31274 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC6.07□□□□□ -1.44
HOXC9P31274 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC6.07□□□□□ -1.44
HOXC9P31274 RSL24D1P8-201ENST00000434442 492 ntBASIC6.07□□□□□ -1.44
HOXC9P31274 RPS3AP54-201ENST00000435535 734 ntBASIC6.07□□□□□ -1.44
HOXC9P31274 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC6.07□□□□□ -1.44
HOXC9P31274 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC6.07□□□□□ -1.44
HOXC9P31274 RPL23AP43-201ENST00000446445 471 ntBASIC6.07□□□□□ -1.44
HOXC9P31274 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC6.07□□□□□ -1.44
HOXC9P31274 RHEBP2-201ENST00000450289 600 ntBASIC6.07□□□□□ -1.44
HOXC9P31274 RPL7P32-201ENST00000457119 744 ntBASIC6.07□□□□□ -1.44
HOXC9P31274 AC053481.1-201ENST00000467217 306 ntBASIC6.07□□□□□ -1.44
HOXC9P31274 AC090686.1-201ENST00000481577 749 ntBASIC6.07□□□□□ -1.44
HOXC9P31274 AC091167.1-201ENST00000492017 396 ntBASIC6.07□□□□□ -1.44
HOXC9P31274 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC6.07□□□□□ -1.44
HOXC9P31274 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC6.07□□□□□ -1.44
HOXC9P31274 RN7SKP5-201ENST00000517045 272 ntBASIC6.07□□□□□ -1.44
HOXC9P31274 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC6.07□□□□□ -1.44
HOXC9P31274 OR8A2P-201ENST00000528631 952 ntBASIC6.07□□□□□ -1.44
HOXC9P31274 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC6.07□□□□□ -1.44
HOXC9P31274 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.07□□□□□ -1.44
HOXC9P31274 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC6.07□□□□□ -1.44
HOXC9P31274 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC6.07□□□□□ -1.44
HOXC9P31274 AC025884.1-201ENST00000556034 378 ntBASIC6.07□□□□□ -1.44
HOXC9P31274 PSMB7P1-201ENST00000556349 514 ntBASIC6.07□□□□□ -1.44
HOXC9P31274 OOSP1P2-201ENST00000579644 351 ntBASIC6.07□□□□□ -1.44
HOXC9P31274 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC6.07□□□□□ -1.44
HOXC9P31274 AL713998.2-201ENST00000604538 1198 ntBASIC6.07□□□□□ -1.44
HOXC9P31274 AL354696.1-201ENST00000614652 497 ntBASIC6.07□□□□□ -1.44
HOXC9P31274 AL023881.1-201ENST00000621088 301 ntBASIC6.07□□□□□ -1.44
HOXC9P31274 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
HOXC9P31274 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC6.07□□□□□ -1.44
HOXC9P31274 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HOXC9P31274 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HOXC9P31274 CPHL1P-201ENST00000461341 3407 ntBASIC6.07□□□□□ -1.44
HOXC9P31274 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HOXC9P31274 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HOXC9P31274 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HOXC9P31274 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HOXC9P31274 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HOXC9P31274 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.07□□□□□ -1.44
HOXC9P31274 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HOXC9P31274 AC097063.1-201ENST00000426714 1797 ntBASIC6.06□□□□□ -1.44
HOXC9P31274 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
HOXC9P31274 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC6.06□□□□□ -1.44
HOXC9P31274 AC008033.1-201ENST00000216407 1162 ntBASIC6.06□□□□□ -1.44
HOXC9P31274 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
HOXC9P31274 AL121657.1-201ENST00000327215 531 ntBASIC6.06□□□□□ -1.44
HOXC9P31274 SNORA70C-201ENST00000384538 135 ntBASIC6.06□□□□□ -1.44
HOXC9P31274 DHFRP5-201ENST00000406944 564 ntBASIC6.06□□□□□ -1.44
HOXC9P31274 GLS-204ENST00000409428 816 ntTSL 2 BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms