Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC7.15□□□□□ -1.27
CLIP1P30622 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC7.15□□□□□ -1.27
CLIP1P30622 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC7.15□□□□□ -1.27
CLIP1P30622 MTCO1P35-201ENST00000515270 228 ntBASIC7.15□□□□□ -1.27
CLIP1P30622 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC7.15□□□□□ -1.27
CLIP1P30622 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC7.15□□□□□ -1.27
CLIP1P30622 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC7.15□□□□□ -1.27
CLIP1P30622 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.27
CLIP1P30622 AC084824.1-201ENST00000550917 1005 ntBASIC7.15□□□□□ -1.27
CLIP1P30622 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC7.15□□□□□ -1.27
CLIP1P30622 ADAD1P2-201ENST00000588476 646 ntBASIC7.15□□□□□ -1.27
CLIP1P30622 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC7.15□□□□□ -1.27
CLIP1P30622 MIR8069-1-201ENST00000616627 86 ntBASIC7.15□□□□□ -1.27
CLIP1P30622 MIR8069-2-201ENST00000621412 86 ntBASIC7.15□□□□□ -1.27
CLIP1P30622 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC7.15□□□□□ -1.27
CLIP1P30622 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC7.15□□□□□ -1.27
CLIP1P30622 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC7.15□□□□□ -1.27
CLIP1P30622 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC7.15□□□□□ -1.27
CLIP1P30622 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC7.14□□□□□ -1.27
CLIP1P30622 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CLIP1P30622 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
CLIP1P30622 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC7.14□□□□□ -1.27
CLIP1P30622 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC7.14□□□□□ -1.27
CLIP1P30622 OR5P1P-201ENST00000299512 925 ntBASIC7.14□□□□□ -1.27
CLIP1P30622 SNORA70C-201ENST00000384538 135 ntBASIC7.14□□□□□ -1.27
CLIP1P30622 COX7B2-202ENST00000396533 617 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
CLIP1P30622 MIR921-201ENST00000401133 56 ntBASIC7.14□□□□□ -1.27
CLIP1P30622 NPM1P37-201ENST00000403105 874 ntBASIC7.14□□□□□ -1.27
CLIP1P30622 EIF4A1P1-201ENST00000420241 934 ntBASIC7.14□□□□□ -1.27
CLIP1P30622 NFYAP1-201ENST00000431953 972 ntBASIC7.14□□□□□ -1.27
CLIP1P30622 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC7.14□□□□□ -1.27
CLIP1P30622 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC7.14□□□□□ -1.27
CLIP1P30622 VN1R85P-201ENST00000601587 426 ntBASIC7.14□□□□□ -1.27
CLIP1P30622 AP000843.1-201ENST00000624880 701 ntBASIC7.14□□□□□ -1.27
CLIP1P30622 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CLIP1P30622 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CLIP1P30622 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CLIP1P30622 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
CLIP1P30622 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC7.14□□□□□ -1.27
CLIP1P30622 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CLIP1P30622 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC7.13□□□□□ -1.27
CLIP1P30622 OR56B2P-201ENST00000317102 954 ntBASIC7.13□□□□□ -1.27
CLIP1P30622 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
CLIP1P30622 RNU1-63P-201ENST00000383902 164 ntBASIC7.13□□□□□ -1.27
CLIP1P30622 SNX10-203ENST00000409367 746 ntTSL 5 BASIC7.13□□□□□ -1.27
CLIP1P30622 RN7SKP27-201ENST00000410684 333 ntBASIC7.13□□□□□ -1.27
CLIP1P30622 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC7.13□□□□□ -1.27
CLIP1P30622 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC7.13□□□□□ -1.27
CLIP1P30622 AC011998.1-201ENST00000433403 117 ntBASIC7.13□□□□□ -1.27
CLIP1P30622 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC7.13□□□□□ -1.27
CLIP1P30622 RPL7P19-201ENST00000469948 618 ntBASIC7.13□□□□□ -1.27
CLIP1P30622 AC108751.2-201ENST00000469993 231 ntBASIC7.13□□□□□ -1.27
CLIP1P30622 AC010476.1-201ENST00000519111 851 ntBASIC7.13□□□□□ -1.27
CLIP1P30622 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC7.13□□□□□ -1.27
CLIP1P30622 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC7.13□□□□□ -1.27
CLIP1P30622 AC005520.3-201ENST00000602874 370 ntBASIC7.13□□□□□ -1.27
CLIP1P30622 AC010201.1-201ENST00000605051 540 ntBASIC7.13□□□□□ -1.27
CLIP1P30622 AP002360.3-201ENST00000607673 710 ntBASIC7.13□□□□□ -1.27
CLIP1P30622 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CLIP1P30622 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC7.13□□□□□ -1.27
CLIP1P30622 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CLIP1P30622 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
CLIP1P30622 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CLIP1P30622 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
CLIP1P30622 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CLIP1P30622 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
CLIP1P30622 SNRPFP1-201ENST00000414761 252 ntBASIC7.12□□□□□ -1.27
CLIP1P30622 AC239367.2-201ENST00000447309 705 ntBASIC7.12□□□□□ -1.27
CLIP1P30622 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC7.12□□□□□ -1.27
CLIP1P30622 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC7.12□□□□□ -1.27
CLIP1P30622 RPS4XP18-201ENST00000495480 763 ntBASIC7.12□□□□□ -1.27
CLIP1P30622 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CLIP1P30622 AC011477.5-201ENST00000586571 259 ntBASIC7.12□□□□□ -1.27
CLIP1P30622 AC234782.5-201ENST00000617723 324 ntBASIC7.12□□□□□ -1.27
CLIP1P30622 AL445567.2-201ENST00000618935 498 ntBASIC7.12□□□□□ -1.27
CLIP1P30622 TEX41-256ENST00000626411 368 ntTSL 5 BASIC7.12□□□□□ -1.27
CLIP1P30622 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC7.12□□□□□ -1.27
CLIP1P30622 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CLIP1P30622 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC7.12□□□□□ -1.27
CLIP1P30622 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CLIP1P30622 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CLIP1P30622 EIF2AP4-201ENST00000424793 1781 ntBASIC7.11□□□□□ -1.27
CLIP1P30622 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CLIP1P30622 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
CLIP1P30622 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
CLIP1P30622 FCF1P5-201ENST00000406490 482 ntBASIC7.11□□□□□ -1.27
CLIP1P30622 RN7SKP167-201ENST00000411047 285 ntBASIC7.11□□□□□ -1.27
CLIP1P30622 ANAPC1P1-201ENST00000426186 2145 ntBASIC7.11□□□□□ -1.27
CLIP1P30622 RPS29P17-201ENST00000430795 166 ntBASIC7.11□□□□□ -1.27
CLIP1P30622 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC7.11□□□□□ -1.27
CLIP1P30622 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CLIP1P30622 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CLIP1P30622 RPL23AP37-201ENST00000479658 549 ntBASIC7.11□□□□□ -1.27
CLIP1P30622 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC7.11□□□□□ -1.27
CLIP1P30622 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC7.11□□□□□ -1.27
CLIP1P30622 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC7.11□□□□□ -1.27
CLIP1P30622 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC7.11□□□□□ -1.27
CLIP1P30622 AC007224.1-201ENST00000564410 144 ntBASIC7.11□□□□□ -1.27
CLIP1P30622 LINC01808-202ENST00000641680 1116 ntBASIC7.11□□□□□ -1.27
CLIP1P30622 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC7.11□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms